Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SNRPA1P09661 RNU6-440P-201ENST00000390882 105 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 RNU4-62P-201ENST00000410125 130 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 BTF3P4-201ENST00000418852 495 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.17□□□□□ -2.06
SNRPA1P09661 HSPE1P9-201ENST00000440046 311 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.17□□□□□ -2.06
SNRPA1P09661 SNORA31.10-201ENST00000516482 106 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 RNA5SP153-201ENST00000516498 76 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 AL160236.1-201ENST00000556317 195 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 MIR4303-201ENST00000581299 66 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 MIR3935-201ENST00000583472 104 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 AC008507.4-201ENST00000585464 127 ntBASIC2.17□□□□□ -2.06
SNRPA1P09661 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SNRPA1P09661 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
SNRPA1P09661 SNORA4.2-201ENST00000365313 147 ntBASIC2.16□□□□□ -2.06
SNRPA1P09661 SNORA48.1-201ENST00000390879 135 ntBASIC2.16□□□□□ -2.06
SNRPA1P09661 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
SNRPA1P09661 RNA5SP489-201ENST00000410986 109 ntBASIC2.16□□□□□ -2.06
SNRPA1P09661 FTH1P12-201ENST00000432137 551 ntBASIC2.16□□□□□ -2.06
SNRPA1P09661 MIR3646-201ENST00000578301 84 ntBASIC2.16□□□□□ -2.06
SNRPA1P09661 MIR4662B-201ENST00000579498 81 ntBASIC2.16□□□□□ -2.06
SNRPA1P09661 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SNRPA1P09661 AC097639.2-201ENST00000603159 172 ntBASIC2.16□□□□□ -2.06
SNRPA1P09661 AL627230.6-201ENST00000611129 280 ntBASIC2.16□□□□□ -2.06
SNRPA1P09661 AC091895.1-201ENST00000624494 256 ntBASIC2.16□□□□□ -2.06
SNRPA1P09661 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.16□□□□□ -2.06
SNRPA1P09661 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
SNRPA1P09661 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
SNRPA1P09661 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.15□□□□□ -2.06
SNRPA1P09661 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SNRPA1P09661 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SNRPA1P09661 ICE2P2-201ENST00000483823 2787 ntBASIC2.15□□□□□ -2.07
SNRPA1P09661 RNU6-597P-201ENST00000365620 102 ntBASIC2.15□□□□□ -2.07
SNRPA1P09661 RPL30P13-201ENST00000418873 348 ntBASIC2.15□□□□□ -2.07
SNRPA1P09661 AL606753.1-201ENST00000427435 87 ntBASIC2.15□□□□□ -2.07
SNRPA1P09661 Y_RNA.714-201ENST00000517065 90 ntBASIC2.15□□□□□ -2.07
SNRPA1P09661 RNU6-365P-201ENST00000517113 106 ntBASIC2.15□□□□□ -2.07
SNRPA1P09661 snoU13.31-201ENST00000607291 104 ntBASIC2.15□□□□□ -2.07
SNRPA1P09661 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
SNRPA1P09661 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SNRPA1P09661 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SNRPA1P09661 Y_RNA.66-201ENST00000362862 102 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 SNORD50B-201ENST00000364995 70 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 RNU6-460P-201ENST00000391158 108 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 RNA5SP482-201ENST00000391269 118 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 SNORA26-201ENST00000391286 122 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 SNORA75.5-201ENST00000391291 81 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 RNU6-257P-201ENST00000410238 98 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 RNA5SP450-201ENST00000411206 102 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 AL158823.1-201ENST00000418441 478 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 RNU7-197P-201ENST00000458836 62 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 AC092991.1-201ENST00000477176 376 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 AC108729.3-201ENST00000513484 108 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 Y_RNA.666-201ENST00000516187 112 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 SUB1P4-201ENST00000566062 339 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 MIR3618-201ENST00000580330 88 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 AC010332.2-201ENST00000613083 1904 ntBASIC2.14□□□□□ -2.07
SNRPA1P09661 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.14□□□□□ -2.07
SNRPA1P09661 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SNRPA1P09661 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SNRPA1P09661 RNU6-1084P-201ENST00000362498 107 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 SNORA63D-201ENST00000364359 132 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 SNORA25.7-201ENST00000364375 127 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 Y_RNA.420-201ENST00000384043 110 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 MIR802-201ENST00000390235 94 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 Y_RNA.586-201ENST00000391146 98 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 AP1B1P2-201ENST00000416196 106 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 AC069257.2-201ENST00000441819 155 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 RNA5SP437-201ENST00000517249 129 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 RNU6-1116P-201ENST00000517269 99 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 MIR4762-201ENST00000585261 75 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 AC087685.1-201ENST00000587507 141 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.13□□□□□ -2.07
SNRPA1P09661 AL359851.1-201ENST00000569460 4997 ntBASIC2.13□□□□□ -2.07
SNRPA1P09661 U8.5-201ENST00000364528 136 ntBASIC2.12□□□□□ -2.07
SNRPA1P09661 RNU2-7P-201ENST00000410794 178 ntBASIC2.12□□□□□ -2.07
SNRPA1P09661 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.12□□□□□ -2.07
SNRPA1P09661 RNU6-1053P-201ENST00000515930 101 ntBASIC2.12□□□□□ -2.07
SNRPA1P09661 Y_RNA.676-201ENST00000516393 96 ntBASIC2.12□□□□□ -2.07
SNRPA1P09661 RNU6-126P-201ENST00000516685 103 ntBASIC2.12□□□□□ -2.07
SNRPA1P09661 RNU7-28P-201ENST00000516759 62 ntBASIC2.12□□□□□ -2.07
SNRPA1P09661 RNU6-1270P-201ENST00000517128 108 ntBASIC2.12□□□□□ -2.07
SNRPA1P09661 AC007751.1-201ENST00000529260 376 ntBASIC2.12□□□□□ -2.07
SNRPA1P09661 AL096840.1-201ENST00000603287 93 ntBASIC2.12□□□□□ -2.07
SNRPA1P09661 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SNRPA1P09661 Y_RNA.4-201ENST00000362333 112 ntBASIC2.11□□□□□ -2.07
SNRPA1P09661 RNU6-112P-201ENST00000363599 104 ntBASIC2.11□□□□□ -2.07
SNRPA1P09661 SNORD14E-201ENST00000364009 85 ntBASIC2.11□□□□□ -2.07
SNRPA1P09661 SNORD61-201ENST00000384252 73 ntBASIC2.11□□□□□ -2.07
SNRPA1P09661 MIR520A-201ENST00000384862 85 ntBASIC2.11□□□□□ -2.07
SNRPA1P09661 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SNRPA1P09661 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
SNRPA1P09661 HMGN2P19-201ENST00000425149 265 ntBASIC2.11□□□□□ -2.07
SNRPA1P09661 SNORD45.4-201ENST00000516629 73 ntBASIC2.11□□□□□ -2.07
SNRPA1P09661 AC090142.3-201ENST00000519012 385 ntBASIC2.11□□□□□ -2.07
SNRPA1P09661 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SNRPA1P09661 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SNRPA1P09661 Y_RNA.251-201ENST00000364551 99 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms