Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MIR513A1-201ENST00000385138 129 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 MIR616-201ENST00000385293 97 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 MIR802-201ENST00000390235 94 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 RNU6-918P-201ENST00000391219 106 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 AL606845.1-201ENST00000404881 255 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 Y_RNA.622-201ENST00000411091 108 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 AC023449.1-201ENST00000454464 154 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 Y_RNA.644-201ENST00000459006 113 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 RNU6-561P-201ENST00000516222 102 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 Y_RNA.674-201ENST00000516362 113 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 RNU7-149P-201ENST00000516739 59 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.36□□□□□ -2.19
CLPTM1O96005 MIR5688-201ENST00000580619 83 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 Z83818.1-201ENST00000603584 150 ntBASIC1.36□□□□□ -2.19
CLPTM1O96005 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CLPTM1O96005 RNU6-1123P-201ENST00000362347 106 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 Y_RNA.7-201ENST00000362352 102 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 SNORD14E-201ENST00000364009 85 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 Y_RNA.238-201ENST00000364441 102 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 Y_RNA.338-201ENST00000365320 114 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 RNU4-70P-201ENST00000384579 139 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 RNU1-78P-201ENST00000391248 165 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 MIR891A-201ENST00000401237 79 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 Y_RNA.793-201ENST00000411222 111 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 AC108059.2-201ENST00000434626 151 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 SNORD77.4-201ENST00000516158 81 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 Y_RNA.714-201ENST00000517065 90 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 AL391903.3-201ENST00000612158 163 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 AC027279.3-201ENST00000625055 122 ntBASIC1.35□□□□□ -2.19
CLPTM1O96005 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
CLPTM1O96005 Y_RNA.182-201ENST00000363880 111 ntBASIC1.34□□□□□ -2.19
CLPTM1O96005 AC092991.1-201ENST00000477176 376 ntBASIC1.34□□□□□ -2.19
CLPTM1O96005 RNU6-794P-201ENST00000517261 64 ntBASIC1.34□□□□□ -2.19
CLPTM1O96005 AC015688.6-201ENST00000577737 104 ntBASIC1.34□□□□□ -2.19
CLPTM1O96005 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.34□□□□□ -2.19
CLPTM1O96005 MIR4744-201ENST00000581563 82 ntBASIC1.34□□□□□ -2.19
CLPTM1O96005 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.34□□□□□ -2.19
CLPTM1O96005 AC087685.1-201ENST00000587507 141 ntBASIC1.34□□□□□ -2.19
CLPTM1O96005 AC108706.1-201ENST00000611053 297 ntBASIC1.34□□□□□ -2.19
CLPTM1O96005 Pinc.1-201ENST00000616452 154 ntBASIC1.34□□□□□ -2.19
CLPTM1O96005 RNU6-833P-201ENST00000363486 107 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 RNU6-103P-201ENST00000363686 107 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 SNORD45.3-201ENST00000363836 72 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 MIR526A1-201ENST00000384897 85 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 MIR516B2-201ENST00000385190 85 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 MIR1323-201ENST00000408090 73 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 AC108667.1-201ENST00000428618 249 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 AC015922.2-201ENST00000435593 184 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 snoU13.9-201ENST00000458927 103 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 Y_RNA.797-201ENST00000515977 94 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 SNORA81.3-201ENST00000517283 198 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 AC019176.1-201ENST00000518519 225 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 AP002392.1-201ENST00000537692 208 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 SNORD53B-201ENST00000577887 78 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 AL645939.4-201ENST00000604495 135 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 BX248123.2-201ENST00000606318 124 ntBASIC1.33□□□□□ -2.2
CLPTM1O96005 Y_RNA.29-201ENST00000362570 113 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 RNU6-199P-201ENST00000362954 107 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 RNU6-60P-201ENST00000364792 103 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 RNU6-442P-201ENST00000383968 104 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 Y_RNA.412-201ENST00000384001 104 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 RNU6-484P-201ENST00000384016 107 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 Y_RNA.486-201ENST00000384398 107 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 RNU6-578P-201ENST00000390980 103 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 RNU6-1228P-201ENST00000391014 107 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 HMGN2P32-201ENST00000444648 269 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 AC245517.4-201ENST00000448601 281 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 AL138752.1-201ENST00000452964 351 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 RNU6-1219P-201ENST00000516143 112 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 RNU6-917P-201ENST00000516294 104 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 AC090142.3-201ENST00000519012 385 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 AC109810.1-201ENST00000534066 224 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 AL365434.2-201ENST00000607979 234 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 U6.106-201ENST00000636360 105 ntBASIC1.32□□□□□ -2.2
CLPTM1O96005 MIR302D-201ENST00000362275 68 ntBASIC1.31□□□□□ -2.2
CLPTM1O96005 Y_RNA.91-201ENST00000363042 107 ntBASIC1.31□□□□□ -2.2
CLPTM1O96005 Y_RNA.233-201ENST00000364407 101 ntBASIC1.31□□□□□ -2.2
CLPTM1O96005 RNU6-1138P-201ENST00000365359 106 ntBASIC1.31□□□□□ -2.2
CLPTM1O96005 MIR15B-201ENST00000385045 98 ntBASIC1.31□□□□□ -2.2
CLPTM1O96005 MIR758-201ENST00000390227 88 ntBASIC1.31□□□□□ -2.2
CLPTM1O96005 SNORA67.5-201ENST00000391036 107 ntBASIC1.31□□□□□ -2.2
CLPTM1O96005 SNRPGP14-201ENST00000435400 219 ntBASIC1.31□□□□□ -2.2
CLPTM1O96005 AL121914.1-201ENST00000450188 156 ntBASIC1.31□□□□□ -2.2
CLPTM1O96005 SNRPGP8-201ENST00000454064 226 ntBASIC1.31□□□□□ -2.2
CLPTM1O96005 AC108729.3-201ENST00000513484 108 ntBASIC1.31□□□□□ -2.2
CLPTM1O96005 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CLPTM1O96005 Y_RNA.121-201ENST00000363309 113 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 RNU6-268P-201ENST00000364174 107 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 Y_RNA.336-201ENST00000365307 109 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 Y_RNA.432-201ENST00000384087 111 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 Y_RNA.435-201ENST00000384095 112 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 SNORA67.6-201ENST00000391093 99 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 RNU4-62P-201ENST00000410125 130 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.3□□□□□ -2.2
CLPTM1O96005 Y_RNA.666-201ENST00000516187 112 ntBASIC1.3□□□□□ -2.2
CLPTM1O96005 RNU6-1299P-201ENST00000516316 100 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms