Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 SNORD14E-201ENST00000364009 85 ntBASIC1.84□□□□□ -2.11
CNOT3O75175 RNU6-597P-201ENST00000365620 102 ntBASIC1.84□□□□□ -2.11
CNOT3O75175 RNU6-440P-201ENST00000390882 105 ntBASIC1.84□□□□□ -2.11
CNOT3O75175 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.84□□□□□ -2.11
CNOT3O75175 HMGN2P19-201ENST00000425149 265 ntBASIC1.84□□□□□ -2.11
CNOT3O75175 AC003989.2-201ENST00000440224 169 ntBASIC1.84□□□□□ -2.11
CNOT3O75175 AC069257.2-201ENST00000441819 155 ntBASIC1.84□□□□□ -2.11
CNOT3O75175 AC092991.1-201ENST00000477176 376 ntBASIC1.84□□□□□ -2.11
CNOT3O75175 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.84□□□□□ -2.11
CNOT3O75175 AL160236.1-201ENST00000556317 195 ntBASIC1.84□□□□□ -2.11
CNOT3O75175 AC011603.4-201ENST00000611325 277 ntBASIC1.84□□□□□ -2.11
CNOT3O75175 MIR8054-201ENST00000620877 86 ntBASIC1.84□□□□□ -2.11
CNOT3O75175 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
CNOT3O75175 RNU6-978P-201ENST00000364371 103 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 RNU6-81P-201ENST00000365608 104 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 RNU6-1117P-201ENST00000384525 104 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 Y_RNA.542-201ENST00000384641 111 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 Y_RNA.584-201ENST00000391090 114 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 RNA5SP482-201ENST00000391269 118 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 MTND4LP9-201ENST00000427694 174 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 RNU6-1211P-201ENST00000459179 105 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 RPL23AP42-201ENST00000471152 471 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.83□□□□□ -2.12
CNOT3O75175 Y_RNA.666-201ENST00000516187 112 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 SNORA18.4-201ENST00000516440 124 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 RNU6-504P-201ENST00000516568 104 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 AP001328.1-201ENST00000528550 176 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 MIR548AI-201ENST00000579940 88 ntBASIC1.83□□□□□ -2.12
CNOT3O75175 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.83□□□□□ -2.12
CNOT3O75175 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CNOT3O75175 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CNOT3O75175 RNY1P11-201ENST00000363759 113 ntBASIC1.82□□□□□ -2.12
CNOT3O75175 Y_RNA.242-201ENST00000364473 110 ntBASIC1.82□□□□□ -2.12
CNOT3O75175 snoU2-30.1-201ENST00000365012 70 ntBASIC1.82□□□□□ -2.12
CNOT3O75175 RNU6-959P-201ENST00000384671 107 ntBASIC1.82□□□□□ -2.12
CNOT3O75175 SNORA26.9-201ENST00000391322 122 ntBASIC1.82□□□□□ -2.12
CNOT3O75175 FTH1P12-201ENST00000432137 551 ntBASIC1.82□□□□□ -2.12
CNOT3O75175 HSPE1P9-201ENST00000440046 311 ntBASIC1.82□□□□□ -2.12
CNOT3O75175 RNU7-197P-201ENST00000458836 62 ntBASIC1.82□□□□□ -2.12
CNOT3O75175 RNU6-971P-201ENST00000516920 106 ntBASIC1.82□□□□□ -2.12
CNOT3O75175 AC087685.1-201ENST00000587507 141 ntBASIC1.82□□□□□ -2.12
CNOT3O75175 AC097639.2-201ENST00000603159 172 ntBASIC1.82□□□□□ -2.12
CNOT3O75175 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.82□□□□□ -2.12
CNOT3O75175 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.82□□□□□ -2.12
CNOT3O75175 RNU6-915P-201ENST00000364943 103 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 SNORD50B-201ENST00000364995 70 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 RNU6-442P-201ENST00000383968 104 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 RNU6-163P-201ENST00000384396 106 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 MIR583-201ENST00000384846 75 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CNOT3O75175 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 RN7SKP200-201ENST00000410564 320 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 RNA5SP501-201ENST00000410990 112 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 AL158823.1-201ENST00000418441 478 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 RNU7-34P-201ENST00000459394 64 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.81□□□□□ -2.12
CNOT3O75175 RNU6-693P-201ENST00000516134 107 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 SNORD45.4-201ENST00000516629 73 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 RNU7-28P-201ENST00000516759 62 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 MIR3129-201ENST00000581095 76 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 SNORA28-201ENST00000606769 126 ntBASIC1.81□□□□□ -2.12
CNOT3O75175 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
CNOT3O75175 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CNOT3O75175 Y_RNA.66-201ENST00000362862 102 ntBASIC1.8□□□□□ -2.12
CNOT3O75175 Y_RNA.291-201ENST00000364886 113 ntBASIC1.8□□□□□ -2.12
CNOT3O75175 SNORA4.2-201ENST00000365313 147 ntBASIC1.8□□□□□ -2.12
CNOT3O75175 SNORD61-201ENST00000384252 73 ntBASIC1.8□□□□□ -2.12
CNOT3O75175 RNU6-1081P-201ENST00000384537 107 ntBASIC1.8□□□□□ -2.12
CNOT3O75175 MIR548I2-201ENST00000408348 149 ntBASIC1.8□□□□□ -2.12
CNOT3O75175 RNU5E-3P-201ENST00000515913 68 ntBASIC1.8□□□□□ -2.12
CNOT3O75175 RNA5SP182-201ENST00000516064 82 ntBASIC1.8□□□□□ -2.12
CNOT3O75175 SNORA31.10-201ENST00000516482 106 ntBASIC1.8□□□□□ -2.12
CNOT3O75175 RNU6-62P-201ENST00000516526 102 ntBASIC1.8□□□□□ -2.12
CNOT3O75175 AC007751.1-201ENST00000529260 376 ntBASIC1.8□□□□□ -2.12
CNOT3O75175 TUG1_4.1-201ENST00000619464 181 ntBASIC1.8□□□□□ -2.12
CNOT3O75175 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.8□□□□□ -2.12
CNOT3O75175 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
CNOT3O75175 U8.5-201ENST00000364528 136 ntBASIC1.79□□□□□ -2.12
CNOT3O75175 SNORD113-1-201ENST00000365321 69 ntBASIC1.79□□□□□ -2.12
CNOT3O75175 SNORD18B-201ENST00000365659 72 ntBASIC1.79□□□□□ -2.12
CNOT3O75175 SNORA1-201ENST00000384107 130 ntBASIC1.79□□□□□ -2.12
CNOT3O75175 MIR520A-201ENST00000384862 85 ntBASIC1.79□□□□□ -2.12
CNOT3O75175 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CNOT3O75175 SNORA48.1-201ENST00000390879 135 ntBASIC1.79□□□□□ -2.12
CNOT3O75175 AC019129.1-201ENST00000403786 261 ntBASIC1.79□□□□□ -2.12
CNOT3O75175 AL034345.1-201ENST00000407768 123 ntBASIC1.79□□□□□ -2.12
CNOT3O75175 RNA5SP127-201ENST00000411051 133 ntBASIC1.79□□□□□ -2.12
CNOT3O75175 SNRPGP13-201ENST00000442212 177 ntBASIC1.79□□□□□ -2.12
CNOT3O75175 RPL23AP63-201ENST00000498752 471 ntBASIC1.79□□□□□ -2.12
CNOT3O75175 RNU6-1116P-201ENST00000517269 99 ntBASIC1.79□□□□□ -2.12
CNOT3O75175 U8.1-201ENST00000362843 134 ntBASIC1.78□□□□□ -2.12
CNOT3O75175 Y_RNA.251-201ENST00000364551 99 ntBASIC1.78□□□□□ -2.12
CNOT3O75175 MIR539-201ENST00000365690 78 ntBASIC1.78□□□□□ -2.12
CNOT3O75175 RNU6-950P-201ENST00000384651 107 ntBASIC1.78□□□□□ -2.12
CNOT3O75175 MIR9-3-201ENST00000385084 90 ntBASIC1.78□□□□□ -2.12
CNOT3O75175 MIR548O-201ENST00000408583 114 ntBASIC1.78□□□□□ -2.12
CNOT3O75175 AL445685.2-201ENST00000422551 342 ntBASIC1.78□□□□□ -2.12
CNOT3O75175 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.78□□□□□ -2.12
CNOT3O75175 RNA5SP57-201ENST00000459463 123 ntBASIC1.78□□□□□ -2.12
CNOT3O75175 RPS29P11-201ENST00000496507 171 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 567.3 ms