Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF40O75150 MIR8054-201ENST00000620877 86 ntBASIC3.61□□□□□ -1.83
RNF40O75150 MIR8057-201ENST00000620957 69 ntBASIC3.61□□□□□ -1.83
RNF40O75150 MIR6717-201ENST00000622747 73 ntBASIC3.61□□□□□ -1.83
RNF40O75150 AC022513.1-201ENST00000624512 117 ntBASIC3.61□□□□□ -1.83
RNF40O75150 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.61□□□□□ -1.83
RNF40O75150 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF40O75150 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RNF40O75150 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
RNF40O75150 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF40O75150 RNA5SP295-201ENST00000362655 121 ntBASIC3.6□□□□□ -1.83
RNF40O75150 MIR34C-201ENST00000384831 77 ntBASIC3.6□□□□□ -1.83
RNF40O75150 MIR519C-201ENST00000385053 87 ntBASIC3.6□□□□□ -1.83
RNF40O75150 MIR561-201ENST00000385216 97 ntBASIC3.6□□□□□ -1.83
RNF40O75150 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RNF40O75150 MIR1262-201ENST00000408276 93 ntBASIC3.6□□□□□ -1.83
RNF40O75150 AC093729.1-201ENST00000513074 128 ntBASIC3.6□□□□□ -1.83
RNF40O75150 AL020996.3-201ENST00000606617 222 ntBASIC3.6□□□□□ -1.83
RNF40O75150 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF40O75150 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF40O75150 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF40O75150 RNU6-315P-201ENST00000362666 107 ntBASIC3.59□□□□□ -1.83
RNF40O75150 SNORA70.7-201ENST00000384159 133 ntBASIC3.59□□□□□ -1.83
RNF40O75150 RNU6-1072P-201ENST00000384703 107 ntBASIC3.59□□□□□ -1.83
RNF40O75150 RNU6-443P-201ENST00000384780 107 ntBASIC3.59□□□□□ -1.83
RNF40O75150 SNORA26.7-201ENST00000391288 122 ntBASIC3.59□□□□□ -1.83
RNF40O75150 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.59□□□□□ -1.83
RNF40O75150 U3.44-201ENST00000458938 192 ntBASIC3.59□□□□□ -1.83
RNF40O75150 RN7SL594P-201ENST00000470590 287 ntBASIC3.59□□□□□ -1.83
RNF40O75150 SNORA31.10-201ENST00000516482 106 ntBASIC3.59□□□□□ -1.83
RNF40O75150 RNU7-53P-201ENST00000516705 60 ntBASIC3.59□□□□□ -1.83
RNF40O75150 DNAJC19P9-201ENST00000555084 351 ntBASIC3.59□□□□□ -1.83
RNF40O75150 MIR4474-201ENST00000579189 78 ntBASIC3.59□□□□□ -1.83
RNF40O75150 MIR7112-201ENST00000616126 65 ntBASIC3.59□□□□□ -1.83
RNF40O75150 AP003355.3-201ENST00000623465 114 ntBASIC3.59□□□□□ -1.83
RNF40O75150 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.59□□□□□ -1.83
RNF40O75150 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNF40O75150 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RNF40O75150 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.59□□□□□ -1.84
RNF40O75150 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.59□□□□□ -1.84
RNF40O75150 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RNF40O75150 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF40O75150 Y_RNA.545-201ENST00000384652 105 ntBASIC3.58□□□□□ -1.84
RNF40O75150 AC090255.1-201ENST00000495779 349 ntBASIC3.58□□□□□ -1.84
RNF40O75150 AC023141.11-201ENST00000508864 202 ntBASIC3.58□□□□□ -1.84
RNF40O75150 AC114801.3-201ENST00000510231 177 ntBASIC3.58□□□□□ -1.84
RNF40O75150 RNU1-143P-201ENST00000516296 146 ntBASIC3.58□□□□□ -1.84
RNF40O75150 RNU6-711P-201ENST00000517255 106 ntBASIC3.58□□□□□ -1.84
RNF40O75150 MIR3169-201ENST00000578032 83 ntBASIC3.58□□□□□ -1.84
RNF40O75150 AL355297.2-201ENST00000604792 129 ntBASIC3.58□□□□□ -1.84
RNF40O75150 U1.23-201ENST00000610293 146 ntBASIC3.58□□□□□ -1.84
RNF40O75150 RNU1-68P-201ENST00000615382 146 ntBASIC3.58□□□□□ -1.84
RNF40O75150 U1.39-201ENST00000621562 146 ntBASIC3.58□□□□□ -1.84
RNF40O75150 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF40O75150 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF40O75150 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNF40O75150 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.58□□□□□ -1.84
RNF40O75150 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNF40O75150 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNF40O75150 RNU6-833P-201ENST00000363486 107 ntBASIC3.57□□□□□ -1.84
RNF40O75150 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF40O75150 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RNF40O75150 RNU6-913P-201ENST00000390913 95 ntBASIC3.57□□□□□ -1.84
RNF40O75150 RNA5SP261-201ENST00000410536 106 ntBASIC3.57□□□□□ -1.84
RNF40O75150 RNU7-73P-201ENST00000458743 63 ntBASIC3.57□□□□□ -1.84
RNF40O75150 SEM1P1-201ENST00000506694 209 ntBASIC3.57□□□□□ -1.84
RNF40O75150 SCARNA20.6-201ENST00000517251 106 ntBASIC3.57□□□□□ -1.84
RNF40O75150 U4atac.1-201ENST00000618345 95 ntBASIC3.57□□□□□ -1.84
RNF40O75150 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF40O75150 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RNF40O75150 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF40O75150 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF40O75150 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RNF40O75150 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.56□□□□□ -1.84
RNF40O75150 RNU6-590P-201ENST00000365039 107 ntBASIC3.56□□□□□ -1.84
RNF40O75150 SNORA1.2-201ENST00000365189 134 ntBASIC3.56□□□□□ -1.84
RNF40O75150 SNORA25B-201ENST00000365507 128 ntBASIC3.56□□□□□ -1.84
RNF40O75150 AC003685.2-201ENST00000422795 395 ntBASIC3.56□□□□□ -1.84
RNF40O75150 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF40O75150 RPS29P29-201ENST00000456396 171 ntBASIC3.56□□□□□ -1.84
RNF40O75150 SNORA28-201ENST00000606769 126 ntBASIC3.56□□□□□ -1.84
RNF40O75150 U7.4-201ENST00000614961 63 ntBASIC3.56□□□□□ -1.84
RNF40O75150 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.56□□□□□ -1.84
RNF40O75150 AC073476.4-201ENST00000628409 72 ntBASIC3.56□□□□□ -1.84
RNF40O75150 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RNF40O75150 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF40O75150 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
RNF40O75150 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
RNF40O75150 RNA5SP493-201ENST00000364115 91 ntBASIC3.55□□□□□ -1.84
RNF40O75150 Y_RNA.567-201ENST00000384736 106 ntBASIC3.55□□□□□ -1.84
RNF40O75150 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RNF40O75150 SNORA48.8-201ENST00000391324 134 ntBASIC3.55□□□□□ -1.84
RNF40O75150 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF40O75150 AL049873.1-201ENST00000480540 376 ntBASIC3.55□□□□□ -1.84
RNF40O75150 RNU6-826P-201ENST00000516827 104 ntBASIC3.55□□□□□ -1.84
RNF40O75150 RNU7-35P-201ENST00000517174 62 ntBASIC3.55□□□□□ -1.84
RNF40O75150 IGKV2-26-201ENST00000518305 343 ntBASIC3.55□□□□□ -1.84
RNF40O75150 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF40O75150 AL513043.2-201ENST00000573941 143 ntBASIC3.55□□□□□ -1.84
RNF40O75150 MIR4791-201ENST00000607666 84 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms