Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIR670-201ENST00000390142 98 ntBASIC3.54□□□□□ -1.84
ACTN4O43707 U6.105-201ENST00000637379 88 ntBASIC3.54□□□□□ -1.84
ACTN4O43707 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ACTN4O43707 AC005336.3-201ENST00000623833 2679 ntBASIC3.54□□□□□ -1.84
ACTN4O43707 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
ACTN4O43707 Y_RNA.140-201ENST00000363474 103 ntBASIC3.53□□□□□ -1.84
ACTN4O43707 Y_RNA.370-201ENST00000365589 108 ntBASIC3.53□□□□□ -1.84
ACTN4O43707 SNORA46-201ENST00000384762 135 ntBASIC3.53□□□□□ -1.84
ACTN4O43707 MIR183-201ENST00000384958 110 ntBASIC3.53□□□□□ -1.84
ACTN4O43707 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
ACTN4O43707 RN7SL75P-201ENST00000461926 281 ntBASIC3.53□□□□□ -1.84
ACTN4O43707 UBL5P1-201ENST00000507979 193 ntBASIC3.53□□□□□ -1.84
ACTN4O43707 RNU7-2P-201ENST00000516096 62 ntBASIC3.53□□□□□ -1.84
ACTN4O43707 RN7SKP57-201ENST00000517248 293 ntBASIC3.53□□□□□ -1.84
ACTN4O43707 DNAJC19P9-201ENST00000555084 351 ntBASIC3.53□□□□□ -1.84
ACTN4O43707 MIR4712-201ENST00000583750 82 ntBASIC3.53□□□□□ -1.84
ACTN4O43707 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
ACTN4O43707 AC093831.2-201ENST00000624393 3427 ntBASIC3.53□□□□□ -1.84
ACTN4O43707 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.53□□□□□ -1.84
ACTN4O43707 MAPK10-362ENST00000641864 4484 ntBASIC3.52□□□□□ -1.85
ACTN4O43707 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.52□□□□□ -1.85
ACTN4O43707 RNU6-457P-201ENST00000363999 107 ntBASIC3.52□□□□□ -1.85
ACTN4O43707 RNA5SP493-201ENST00000364115 91 ntBASIC3.52□□□□□ -1.85
ACTN4O43707 CD24P4-201ENST00000382840 243 ntBASIC3.52□□□□□ -1.85
ACTN4O43707 Y_RNA.565-201ENST00000384719 101 ntBASIC3.52□□□□□ -1.85
ACTN4O43707 SNORA11.4-201ENST00000408823 129 ntBASIC3.52□□□□□ -1.85
ACTN4O43707 AL049873.1-201ENST00000480540 376 ntBASIC3.52□□□□□ -1.85
ACTN4O43707 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ACTN4O43707 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ACTN4O43707 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ACTN4O43707 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.51□□□□□ -1.85
ACTN4O43707 SNORA26.6-201ENST00000391256 115 ntBASIC3.51□□□□□ -1.85
ACTN4O43707 AL445685.2-201ENST00000422551 342 ntBASIC3.51□□□□□ -1.85
ACTN4O43707 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.51□□□□□ -1.85
ACTN4O43707 MIR4444-1-201ENST00000581696 74 ntBASIC3.51□□□□□ -1.85
ACTN4O43707 MIR4444-2-201ENST00000584390 74 ntBASIC3.51□□□□□ -1.85
ACTN4O43707 MIR4791-201ENST00000607666 84 ntBASIC3.51□□□□□ -1.85
ACTN4O43707 MIR6717-201ENST00000622747 73 ntBASIC3.51□□□□□ -1.85
ACTN4O43707 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
ACTN4O43707 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ACTN4O43707 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ACTN4O43707 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ACTN4O43707 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ACTN4O43707 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ACTN4O43707 AL442644.1-201ENST00000454390 3105 ntBASIC3.5□□□□□ -1.85
ACTN4O43707 MIR7-3-201ENST00000384898 110 ntBASIC3.5□□□□□ -1.85
ACTN4O43707 MIR23A-201ENST00000385245 73 ntBASIC3.5□□□□□ -1.85
ACTN4O43707 RPS29P28-201ENST00000446439 141 ntBASIC3.5□□□□□ -1.85
ACTN4O43707 RPS29P29-201ENST00000456396 171 ntBASIC3.5□□□□□ -1.85
ACTN4O43707 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.5□□□□□ -1.85
ACTN4O43707 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.5□□□□□ -1.85
ACTN4O43707 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.5□□□□□ -1.85
ACTN4O43707 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
ACTN4O43707 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ACTN4O43707 AC073325.2-201ENST00000339545 159 ntBASIC3.49□□□□□ -1.85
ACTN4O43707 SNORD115-27-201ENST00000364430 82 ntBASIC3.49□□□□□ -1.85
ACTN4O43707 SNORA7.4-201ENST00000384249 137 ntBASIC3.49□□□□□ -1.85
ACTN4O43707 RNU1-101P-201ENST00000391171 127 ntBASIC3.49□□□□□ -1.85
ACTN4O43707 MIR1262-201ENST00000408276 93 ntBASIC3.49□□□□□ -1.85
ACTN4O43707 AL161932.1-201ENST00000437408 146 ntBASIC3.49□□□□□ -1.85
ACTN4O43707 UQCRHP3-201ENST00000451503 251 ntBASIC3.49□□□□□ -1.85
ACTN4O43707 RN7SL20P-201ENST00000488827 297 ntBASIC3.49□□□□□ -1.85
ACTN4O43707 SEPT14P17-201ENST00000617978 177 ntBASIC3.49□□□□□ -1.85
ACTN4O43707 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ACTN4O43707 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
ACTN4O43707 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
ACTN4O43707 AP000648.3-201ENST00000623539 4507 ntBASIC3.48□□□□□ -1.85
ACTN4O43707 RNU6-833P-201ENST00000363486 107 ntBASIC3.48□□□□□ -1.85
ACTN4O43707 RNU6-524P-201ENST00000384270 107 ntBASIC3.48□□□□□ -1.85
ACTN4O43707 SNORA26.7-201ENST00000391288 122 ntBASIC3.48□□□□□ -1.85
ACTN4O43707 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.48□□□□□ -1.85
ACTN4O43707 RNU6-1190P-201ENST00000410811 104 ntBASIC3.48□□□□□ -1.85
ACTN4O43707 MIR7975-201ENST00000619350 68 ntBASIC3.48□□□□□ -1.85
ACTN4O43707 SNORD3E-202ENST00000627253 216 ntBASIC3.48□□□□□ -1.85
ACTN4O43707 SNORA71.3-201ENST00000362582 128 ntBASIC3.47□□□□□ -1.85
ACTN4O43707 RNU6-23P-201ENST00000363283 107 ntBASIC3.47□□□□□ -1.85
ACTN4O43707 Y_RNA.567-201ENST00000384736 106 ntBASIC3.47□□□□□ -1.85
ACTN4O43707 RNA5SP171-201ENST00000391071 115 ntBASIC3.47□□□□□ -1.85
ACTN4O43707 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.47□□□□□ -1.85
ACTN4O43707 AC005326.1-201ENST00000429197 123 ntBASIC3.47□□□□□ -1.85
ACTN4O43707 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.47□□□□□ -1.85
ACTN4O43707 AC093729.1-201ENST00000513074 128 ntBASIC3.47□□□□□ -1.85
ACTN4O43707 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.47□□□□□ -1.85
ACTN4O43707 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ACTN4O43707 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
ACTN4O43707 MAPK10-322ENST00000641485 4530 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.46□□□□□ -1.86
ACTN4O43707 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
ACTN4O43707 RNU6-1244P-201ENST00000363614 108 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 MIR206-201ENST00000384872 86 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 MIR519C-201ENST00000385053 87 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 MIR516B2-201ENST00000385190 85 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 SNORD67-201ENST00000390833 111 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 U8.16-201ENST00000391279 133 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 RPL31P63-201ENST00000422565 375 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 RN7SL863P-201ENST00000462370 296 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 MIR3169-201ENST00000578032 83 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 UBL5P2-201ENST00000583788 219 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 AL020996.3-201ENST00000606617 222 ntBASIC3.46□□□□□ -1.86
ACTN4O43707 AC145423.2-201ENST00000610631 239 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms