Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.14□□□□□ -1.91
RNF223E7ERA6 MIR3651-201ENST00000630427 90 ntBASIC3.14□□□□□ -1.91
RNF223E7ERA6 OTUD4P1-201ENST00000237841 3067 ntBASIC3.14□□□□□ -1.91
RNF223E7ERA6 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RNF223E7ERA6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RNF223E7ERA6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RNF223E7ERA6 MIR199A2-201ENST00000385289 110 ntBASIC3.13□□□□□ -1.91
RNF223E7ERA6 RN7SL601P-201ENST00000471221 293 ntBASIC3.13□□□□□ -1.91
RNF223E7ERA6 AC023790.1-201ENST00000482174 347 ntBASIC3.13□□□□□ -1.91
RNF223E7ERA6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.13□□□□□ -1.91
RNF223E7ERA6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.13□□□□□ -1.91
RNF223E7ERA6 AC067747.1-201ENST00000608026 250 ntBASIC3.13□□□□□ -1.91
RNF223E7ERA6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF223E7ERA6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF223E7ERA6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RNF223E7ERA6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RNF223E7ERA6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
RNF223E7ERA6 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF223E7ERA6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.12□□□□□ -1.91
RNF223E7ERA6 AC015818.7-201ENST00000428754 109 ntBASIC3.12□□□□□ -1.91
RNF223E7ERA6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.12□□□□□ -1.91
RNF223E7ERA6 HSPE1P24-201ENST00000450782 238 ntBASIC3.12□□□□□ -1.91
RNF223E7ERA6 SNORD105B-201ENST00000458770 79 ntBASIC3.12□□□□□ -1.91
RNF223E7ERA6 RNU7-156P-201ENST00000517214 74 ntBASIC3.12□□□□□ -1.91
RNF223E7ERA6 AC141846.1-201ENST00000568348 142 ntBASIC3.12□□□□□ -1.91
RNF223E7ERA6 AC104996.3-201ENST00000590718 94 ntBASIC3.12□□□□□ -1.91
RNF223E7ERA6 MIR8058-201ENST00000615737 89 ntBASIC3.12□□□□□ -1.91
RNF223E7ERA6 SCARNA15.3-201ENST00000626315 122 ntBASIC3.12□□□□□ -1.91
RNF223E7ERA6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RNF223E7ERA6 AC093908.1-201ENST00000623125 8092 ntBASIC3.12□□□□□ -1.91
RNF223E7ERA6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF223E7ERA6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF223E7ERA6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
RNF223E7ERA6 SNORD115-31-201ENST00000365318 82 ntBASIC3.11□□□□□ -1.91
RNF223E7ERA6 RNU1-109P-201ENST00000383960 147 ntBASIC3.11□□□□□ -1.91
RNF223E7ERA6 RNU6-571P-201ENST00000384128 107 ntBASIC3.11□□□□□ -1.91
RNF223E7ERA6 AC005908.1-201ENST00000468701 347 ntBASIC3.11□□□□□ -1.91
RNF223E7ERA6 RPS27P21-201ENST00000486977 252 ntBASIC3.11□□□□□ -1.91
RNF223E7ERA6 MIR4500-201ENST00000579472 76 ntBASIC3.11□□□□□ -1.91
RNF223E7ERA6 MIR3064-201ENST00000581130 66 ntBASIC3.11□□□□□ -1.91
RNF223E7ERA6 AL357312.1-201ENST00000603879 298 ntBASIC3.11□□□□□ -1.91
RNF223E7ERA6 MIR4727-201ENST00000622232 55 ntBASIC3.11□□□□□ -1.91
RNF223E7ERA6 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.11□□□□□ -1.91
RNF223E7ERA6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RNF223E7ERA6 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.11□□□□□ -1.91
RNF223E7ERA6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RNF223E7ERA6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.11□□□□□ -1.91
RNF223E7ERA6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF223E7ERA6 SNORA48.2-201ENST00000390926 124 ntBASIC3.1□□□□□ -1.91
RNF223E7ERA6 RNA5SP237-201ENST00000410414 113 ntBASIC3.1□□□□□ -1.91
RNF223E7ERA6 SNORA74.3-201ENST00000517108 154 ntBASIC3.1□□□□□ -1.91
RNF223E7ERA6 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF223E7ERA6 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.1□□□□□ -1.91
RNF223E7ERA6 MIR5094-201ENST00000578766 85 ntBASIC3.1□□□□□ -1.91
RNF223E7ERA6 AC005520.4-201ENST00000604337 90 ntBASIC3.1□□□□□ -1.91
RNF223E7ERA6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF223E7ERA6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RNF223E7ERA6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RNF223E7ERA6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF223E7ERA6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF223E7ERA6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RNF223E7ERA6 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
RNF223E7ERA6 WWP1P1-201ENST00000466609 2769 ntBASIC3.09□□□□□ -1.91
RNF223E7ERA6 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RNF223E7ERA6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RNF223E7ERA6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.09□□□□□ -1.91
RNF223E7ERA6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RNF223E7ERA6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RNF223E7ERA6 Y_RNA.12-201ENST00000362393 112 ntBASIC3.09□□□□□ -1.91
RNF223E7ERA6 SNORD9-201ENST00000362566 104 ntBASIC3.09□□□□□ -1.91
RNF223E7ERA6 RNU6-132P-201ENST00000383863 107 ntBASIC3.09□□□□□ -1.91
RNF223E7ERA6 Y_RNA.491-201ENST00000384417 107 ntBASIC3.09□□□□□ -1.91
RNF223E7ERA6 MIR9-2-201ENST00000384838 87 ntBASIC3.09□□□□□ -1.91
RNF223E7ERA6 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RNF223E7ERA6 MIR548U-201ENST00000390728 81 ntBASIC3.09□□□□□ -1.91
RNF223E7ERA6 AC027119.1-201ENST00000440877 241 ntBASIC3.09□□□□□ -1.91
RNF223E7ERA6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.09□□□□□ -1.91
RNF223E7ERA6 AL513423.1-201ENST00000621695 132 ntBASIC3.09□□□□□ -1.91
RNF223E7ERA6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RNF223E7ERA6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.08□□□□□ -1.92
RNF223E7ERA6 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF223E7ERA6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNF223E7ERA6 SNORA8.1-201ENST00000384250 140 ntBASIC3.08□□□□□ -1.92
RNF223E7ERA6 SNORD38B-201ENST00000384690 67 ntBASIC3.08□□□□□ -1.92
RNF223E7ERA6 MIR128-1-201ENST00000384921 82 ntBASIC3.08□□□□□ -1.92
RNF223E7ERA6 AC244636.1-201ENST00000421152 228 ntBASIC3.08□□□□□ -1.92
RNF223E7ERA6 RNU7-43P-201ENST00000516554 64 ntBASIC3.08□□□□□ -1.92
RNF223E7ERA6 SCARNA16.3-201ENST00000516595 184 ntBASIC3.08□□□□□ -1.92
RNF223E7ERA6 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.08□□□□□ -1.92
RNF223E7ERA6 YWHAEP2-201ENST00000580066 112 ntBASIC3.08□□□□□ -1.92
RNF223E7ERA6 YWHAEP3-201ENST00000582767 121 ntBASIC3.08□□□□□ -1.92
RNF223E7ERA6 AC008133.2-201ENST00000624540 351 ntBASIC3.08□□□□□ -1.92
RNF223E7ERA6 SNORD38B-202ENST00000625943 69 ntBASIC3.08□□□□□ -1.92
RNF223E7ERA6 SCARNA4.1-201ENST00000628597 123 ntBASIC3.08□□□□□ -1.92
RNF223E7ERA6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNF223E7ERA6 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNF223E7ERA6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RNF223E7ERA6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF223E7ERA6 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
RNF223E7ERA6 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms