Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC005908.1-201ENST00000468701 347 ntBASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 RNU6-197P-201ENST00000516680 100 ntBASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 DEFB122-202ENST00000569013 197 ntBASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 MIR4255-201ENST00000579351 72 ntBASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 AC098479.1-201ENST00000609225 154 ntBASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 ICE2P2-201ENST00000483823 2787 ntBASIC1.59□□□□□ -2.15
TCRBV7S3A2A0A539 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
TCRBV7S3A2A0A539 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TCRBV7S3A2A0A539 Y_RNA.634-201ENST00000364811 113 ntBASIC1.58□□□□□ -2.16
TCRBV7S3A2A0A539 MIR15B-201ENST00000385045 98 ntBASIC1.58□□□□□ -2.16
TCRBV7S3A2A0A539 MIR1323-201ENST00000408090 73 ntBASIC1.58□□□□□ -2.16
TCRBV7S3A2A0A539 RNU6-295P-201ENST00000516901 104 ntBASIC1.58□□□□□ -2.16
TCRBV7S3A2A0A539 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.58□□□□□ -2.16
TCRBV7S3A2A0A539 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
TCRBV7S3A2A0A539 SNORD33-201ENST00000362761 85 ntBASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 Y_RNA.66-201ENST00000362862 102 ntBASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 SNORD1A-201ENST00000364968 72 ntBASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 SNORA2.2-201ENST00000365473 135 ntBASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 SNORD24-201ENST00000383884 75 ntBASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 MIR526A1-201ENST00000384897 85 ntBASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 AC005840.1-201ENST00000498412 377 ntBASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 RNU6-861P-201ENST00000516745 106 ntBASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 RNU6-365P-201ENST00000517113 106 ntBASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 AC090142.3-201ENST00000519012 385 ntBASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 MIR4431-201ENST00000579990 94 ntBASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 MIR502-201ENST00000606349 86 ntBASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TCRBV7S3A2A0A539 Y_RNA.91-201ENST00000363042 107 ntBASIC1.56□□□□□ -2.16
TCRBV7S3A2A0A539 RNA5SP259-201ENST00000365541 109 ntBASIC1.56□□□□□ -2.16
TCRBV7S3A2A0A539 SNORD38C-201ENST00000384381 69 ntBASIC1.56□□□□□ -2.16
TCRBV7S3A2A0A539 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
TCRBV7S3A2A0A539 SNORA79-201ENST00000408376 140 ntBASIC1.56□□□□□ -2.16
TCRBV7S3A2A0A539 RNU2-70P-201ENST00000410718 179 ntBASIC1.56□□□□□ -2.16
TCRBV7S3A2A0A539 RNU6-917P-201ENST00000516294 104 ntBASIC1.56□□□□□ -2.16
TCRBV7S3A2A0A539 RNU6-504P-201ENST00000516568 104 ntBASIC1.56□□□□□ -2.16
TCRBV7S3A2A0A539 AC090049.2-201ENST00000550377 109 ntBASIC1.56□□□□□ -2.16
TCRBV7S3A2A0A539 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 RNU6-888P-201ENST00000363010 101 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 RNU6-643P-201ENST00000384018 107 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 Y_RNA.441-201ENST00000384123 112 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 Y_RNA.555-201ENST00000384673 110 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 MIR136-201ENST00000385207 82 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 RNU1-78P-201ENST00000391248 165 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 MIR1304-201ENST00000408243 91 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 MIR1289-2-201ENST00000408360 111 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 SNRPGP13-201ENST00000442212 177 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 HSPE1P24-201ENST00000450782 238 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 Y_RNA.662-201ENST00000516028 97 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 Y_RNA.666-201ENST00000516187 112 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 SNORA25.15-201ENST00000516487 89 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 AL513534.2-201ENST00000603836 250 ntBASIC1.55□□□□□ -2.16
TCRBV7S3A2A0A539 RNU6-886P-201ENST00000384319 105 ntBASIC1.54□□□□□ -2.16
TCRBV7S3A2A0A539 AC027119.1-201ENST00000440877 241 ntBASIC1.54□□□□□ -2.16
TCRBV7S3A2A0A539 AC092991.1-201ENST00000477176 376 ntBASIC1.54□□□□□ -2.16
TCRBV7S3A2A0A539 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.54□□□□□ -2.16
TCRBV7S3A2A0A539 BX248123.2-201ENST00000606318 124 ntBASIC1.54□□□□□ -2.16
TCRBV7S3A2A0A539 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.54□□□□□ -2.16
TCRBV7S3A2A0A539 AC106754.2-201ENST00000623006 233 ntBASIC1.54□□□□□ -2.16
TCRBV7S3A2A0A539 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
TCRBV7S3A2A0A539 WWP1P1-201ENST00000466609 2769 ntBASIC1.53□□□□□ -2.16
TCRBV7S3A2A0A539 SNORD61-201ENST00000384252 73 ntBASIC1.53□□□□□ -2.16
TCRBV7S3A2A0A539 MIR548A2-201ENST00000384956 97 ntBASIC1.53□□□□□ -2.16
TCRBV7S3A2A0A539 PCNPP3-201ENST00000393579 471 ntBASIC1.53□□□□□ -2.16
TCRBV7S3A2A0A539 MIR548O-201ENST00000408583 114 ntBASIC1.53□□□□□ -2.16
TCRBV7S3A2A0A539 AC245517.4-201ENST00000448601 281 ntBASIC1.53□□□□□ -2.16
TCRBV7S3A2A0A539 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TCRBV7S3A2A0A539 AC079140.2-201ENST00000506193 142 ntBASIC1.53□□□□□ -2.16
TCRBV7S3A2A0A539 MIR378D2-201ENST00000580636 98 ntBASIC1.53□□□□□ -2.16
TCRBV7S3A2A0A539 MIR3683-201ENST00000580847 82 ntBASIC1.53□□□□□ -2.16
TCRBV7S3A2A0A539 MIR4422-201ENST00000581938 83 ntBASIC1.53□□□□□ -2.16
TCRBV7S3A2A0A539 MIR8063-201ENST00000621930 81 ntBASIC1.53□□□□□ -2.16
TCRBV7S3A2A0A539 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 Y_RNA.547-201ENST00000384654 119 ntBASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 MIR518F-201ENST00000384973 87 ntBASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 RNU6-322P-201ENST00000516010 103 ntBASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 RNU7-121P-201ENST00000516604 62 ntBASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 AC007751.1-201ENST00000529260 376 ntBASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 FAM106DP-201ENST00000586416 501 ntBASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TCRBV7S3A2A0A539 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 RNU4-84P-201ENST00000364200 139 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 RNU6-978P-201ENST00000364371 103 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 Y_RNA.270-201ENST00000364693 104 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 MIR516B2-201ENST00000385190 85 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 SNORA26.9-201ENST00000391322 122 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 RNU6-1135P-201ENST00000411083 103 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 RNU5E-9P-201ENST00000411164 104 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 SEPT7P4-201ENST00000437076 306 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 snoU13.15-201ENST00000459407 104 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 RNU4-57P-201ENST00000515980 135 ntBASIC1.51□□□□□ -2.17
TCRBV7S3A2A0A539 RNU6-693P-201ENST00000516134 107 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms