Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 HMGN2P23-201ENST00000456759 269 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 snoU13.26-201ENST00000459452 105 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC007751.1-201ENST00000529260 376 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 SNORA77B-201ENST00000578179 125 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 DNAJC19P2-201ENST00000593340 302 ntBASIC1.51□□□□□ -2.17
IGHV4-28A0A0C4DH34 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-1336P-201ENST00000383886 109 ntBASIC1.5□□□□□ -2.17
IGHV4-28A0A0C4DH34 Y_RNA.547-201ENST00000384654 119 ntBASIC1.5□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR518F-201ENST00000384973 87 ntBASIC1.5□□□□□ -2.17
IGHV4-28A0A0C4DH34 SNORD37.2-201ENST00000391075 66 ntBASIC1.5□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC005908.1-201ENST00000468701 347 ntBASIC1.5□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC090255.1-201ENST00000495779 349 ntBASIC1.5□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.5□□□□□ -2.17
IGHV4-28A0A0C4DH34 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.5□□□□□ -2.17
IGHV4-28A0A0C4DH34 SNORD114-1-201ENST00000362705 72 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-774P-201ENST00000363238 107 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 SNORA25.7-201ENST00000364375 127 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU4-11P-201ENST00000365287 132 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 SNORA1-201ENST00000384107 130 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 IGLV3-17-201ENST00000519099 244 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC121758.2-201ENST00000553271 193 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR3129-201ENST00000581095 76 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 Y_RNA.783-201ENST00000613546 102 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 Y_RNA.778-201ENST00000620203 90 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR8063-201ENST00000621930 81 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 MTND1P7-201ENST00000632801 297 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR6844-201ENST00000637122 62 ntBASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
IGHV4-28A0A0C4DH34 AL359851.1-201ENST00000569460 4997 ntBASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-1082P-201ENST00000364574 107 ntBASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-597P-201ENST00000365620 102 ntBASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR30A-201ENST00000385092 71 ntBASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR136-201ENST00000385207 82 ntBASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 SUMO1P3-201ENST00000439961 304 ntBASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 snoU13.15-201ENST00000459407 104 ntBASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU7-200P-201ENST00000516105 62 ntBASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-917P-201ENST00000516294 104 ntBASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 FAM106DP-201ENST00000586416 501 ntBASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 AL096840.1-201ENST00000603287 93 ntBASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
IGHV4-28A0A0C4DH34 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 SNORD115-28-201ENST00000363931 81 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 Y_RNA.506-201ENST00000384494 102 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-588P-201ENST00000410281 105 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 AL445646.1-201ENST00000431784 216 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 AF228730.3-201ENST00000436691 102 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC025033.1-201ENST00000463883 194 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC092991.1-201ENST00000477176 376 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 RNU6-346P-201ENST00000516288 111 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 SNORA44.1-201ENST00000517031 108 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC015688.6-201ENST00000577737 104 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 AL365205.2-201ENST00000594586 68 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 MIR6715A-201ENST00000615929 79 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 AC092881.1-201ENST00000638218 2733 ntBASIC1.47□□□□□ -2.17
IGHV4-28A0A0C4DH34 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNORA75.5-201ENST00000391291 81 ntBASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 HSPE1P24-201ENST00000450782 238 ntBASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 snoU13.9-201ENST00000458927 103 ntBASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU4-57P-201ENST00000515980 135 ntBASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU1-40P-201ENST00000516816 164 ntBASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU1-97P-201ENST00000516872 164 ntBASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNORA18.7-201ENST00000516910 131 ntBASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR3646-201ENST00000578301 84 ntBASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR3133-201ENST00000583157 78 ntBASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC104984.5-201ENST00000586878 94 ntBASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 AL365434.2-201ENST00000607979 234 ntBASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
IGHV4-28A0A0C4DH34 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 Y_RNA.37-201ENST00000362606 108 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNORA2.2-201ENST00000365473 135 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 Y_RNA.400-201ENST00000383963 111 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU6-125P-201ENST00000384505 107 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 Y_RNA.542-201ENST00000384641 111 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNORD77.3-201ENST00000391113 65 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR548M-201ENST00000408260 86 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 UBL5P3-201ENST00000475112 231 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU6-830P-201ENST00000516353 107 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNORA18.4-201ENST00000516440 124 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU7-181P-201ENST00000517234 74 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC112693.2-201ENST00000556538 232 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR5002-201ENST00000584713 97 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC134878.1-201ENST00000619901 243 ntBASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNY1P11-201ENST00000363759 113 ntBASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 Y_RNA.215-201ENST00000364204 112 ntBASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNY1P5-201ENST00000383890 115 ntBASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 U8.17-201ENST00000391292 132 ntBASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC019129.1-201ENST00000403786 261 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms