Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 U3.45-201ENST00000607547 219 ntBASIC2.5□□□□□ -2.01
U3KQE9 U1.23-201ENST00000610293 146 ntBASIC2.5□□□□□ -2.01
U3KQE9 RNU1-68P-201ENST00000615382 146 ntBASIC2.5□□□□□ -2.01
U3KQE9 AC012531.4-201ENST00000616509 177 ntBASIC2.5□□□□□ -2.01
U3KQE9 U1.39-201ENST00000621562 146 ntBASIC2.5□□□□□ -2.01
U3KQE9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.5□□□□□ -2.01
U3KQE9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
U3KQE9 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
U3KQE9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
U3KQE9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
U3KQE9 Y_RNA.95-201ENST00000363079 95 ntBASIC2.49□□□□□ -2.01
U3KQE9 Y_RNA.370-201ENST00000365589 108 ntBASIC2.49□□□□□ -2.01
U3KQE9 RNU6-1201P-201ENST00000384227 107 ntBASIC2.49□□□□□ -2.01
U3KQE9 MIR627-201ENST00000384979 97 ntBASIC2.49□□□□□ -2.01
U3KQE9 MIR136-201ENST00000385207 82 ntBASIC2.49□□□□□ -2.01
U3KQE9 RNU6-679P-201ENST00000391003 106 ntBASIC2.49□□□□□ -2.01
U3KQE9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.49□□□□□ -2.01
U3KQE9 RPS29P29-201ENST00000456396 171 ntBASIC2.49□□□□□ -2.01
U3KQE9 RNU7-73P-201ENST00000458743 63 ntBASIC2.49□□□□□ -2.01
U3KQE9 AC006483.1-201ENST00000487308 313 ntBASIC2.49□□□□□ -2.01
U3KQE9 AC092185.1-201ENST00000491371 97 ntBASIC2.49□□□□□ -2.01
U3KQE9 RNU7-181P-201ENST00000517234 74 ntBASIC2.49□□□□□ -2.01
U3KQE9 RNU6-1116P-201ENST00000517269 99 ntBASIC2.49□□□□□ -2.01
U3KQE9 AC023632.4-201ENST00000517783 191 ntBASIC2.49□□□□□ -2.01
U3KQE9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.49□□□□□ -2.01
U3KQE9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.49□□□□□ -2.01
U3KQE9 MIR4276-201ENST00000584832 70 ntBASIC2.49□□□□□ -2.01
U3KQE9 SNORD3E-202ENST00000627253 216 ntBASIC2.49□□□□□ -2.01
U3KQE9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.49□□□□□ -2.01
U3KQE9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
U3KQE9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
U3KQE9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
U3KQE9 RNU6-1313P-201ENST00000362622 102 ntBASIC2.48□□□□□ -2.01
U3KQE9 RNA5SP50-201ENST00000363731 107 ntBASIC2.48□□□□□ -2.01
U3KQE9 RNU1-33P-201ENST00000364249 162 ntBASIC2.48□□□□□ -2.01
U3KQE9 SNORD116-22-201ENST00000384430 92 ntBASIC2.48□□□□□ -2.01
U3KQE9 Y_RNA.494-201ENST00000384432 111 ntBASIC2.48□□□□□ -2.01
U3KQE9 MIR605-201ENST00000385078 83 ntBASIC2.48□□□□□ -2.01
U3KQE9 MIR134-201ENST00000385258 73 ntBASIC2.48□□□□□ -2.01
U3KQE9 U8.16-201ENST00000391279 133 ntBASIC2.48□□□□□ -2.01
U3KQE9 RNU6-887P-201ENST00000410660 100 ntBASIC2.48□□□□□ -2.01
U3KQE9 AL353813.1-201ENST00000440700 253 ntBASIC2.48□□□□□ -2.01
U3KQE9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.48□□□□□ -2.01
U3KQE9 AC115115.1-201ENST00000449927 248 ntBASIC2.48□□□□□ -2.01
U3KQE9 RNU2-13P-201ENST00000515909 113 ntBASIC2.48□□□□□ -2.01
U3KQE9 RNA5SP217-201ENST00000515959 91 ntBASIC2.48□□□□□ -2.01
U3KQE9 RNU6-795P-201ENST00000516323 103 ntBASIC2.48□□□□□ -2.01
U3KQE9 AC034105.4-201ENST00000568304 277 ntBASIC2.48□□□□□ -2.01
U3KQE9 AP006437.1-201ENST00000641440 3685 ntBASIC2.48□□□□□ -2.01
U3KQE9 AC245060.5-201ENST00000610778 3293 ntBASIC2.47□□□□□ -2.01
U3KQE9 AC073346.2-201ENST00000624724 2058 ntBASIC2.47□□□□□ -2.01
U3KQE9 MIR490-201ENST00000384865 128 ntBASIC2.47□□□□□ -2.01
U3KQE9 AC022137.1-201ENST00000483735 151 ntBASIC2.47□□□□□ -2.01
U3KQE9 RNA5SP367-201ENST00000516557 118 ntBASIC2.47□□□□□ -2.01
U3KQE9 RNA5SP168-201ENST00000516642 112 ntBASIC2.47□□□□□ -2.01
U3KQE9 RNA5SP33-201ENST00000516687 98 ntBASIC2.47□□□□□ -2.01
U3KQE9 RNA5SP137-201ENST00000516833 135 ntBASIC2.47□□□□□ -2.01
U3KQE9 AC022254.1-201ENST00000567857 235 ntBASIC2.47□□□□□ -2.01
U3KQE9 MIR2682-201ENST00000580305 110 ntBASIC2.47□□□□□ -2.01
U3KQE9 AC034229.5-201ENST00000624258 185 ntBASIC2.47□□□□□ -2.01
U3KQE9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.47□□□□□ -2.01
U3KQE9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.47□□□□□ -2.01
U3KQE9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
U3KQE9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
U3KQE9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.46□□□□□ -2.02
U3KQE9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
U3KQE9 Y_RNA.171-201ENST00000363760 102 ntBASIC2.46□□□□□ -2.02
U3KQE9 SNORA1.1-201ENST00000364671 133 ntBASIC2.46□□□□□ -2.02
U3KQE9 RNU6-1067P-201ENST00000384752 107 ntBASIC2.46□□□□□ -2.02
U3KQE9 RNU6-1031P-201ENST00000384773 107 ntBASIC2.46□□□□□ -2.02
U3KQE9 MIR200C-201ENST00000384980 68 ntBASIC2.46□□□□□ -2.02
U3KQE9 RNA5SP465-201ENST00000391195 109 ntBASIC2.46□□□□□ -2.02
U3KQE9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.46□□□□□ -2.02
U3KQE9 SNORA7.5-201ENST00000410672 110 ntBASIC2.46□□□□□ -2.02
U3KQE9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.46□□□□□ -2.02
U3KQE9 RPS27P29-201ENST00000463110 252 ntBASIC2.46□□□□□ -2.02
U3KQE9 RN7SL293P-201ENST00000481765 281 ntBASIC2.46□□□□□ -2.02
U3KQE9 RNU7-12P-201ENST00000516030 62 ntBASIC2.46□□□□□ -2.02
U3KQE9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.46□□□□□ -2.02
U3KQE9 MIR548AE2-201ENST00000583456 67 ntBASIC2.46□□□□□ -2.02
U3KQE9 MIR4777-201ENST00000583710 86 ntBASIC2.46□□□□□ -2.02
U3KQE9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
U3KQE9 AC108206.1-201ENST00000570186 4159 ntBASIC2.46□□□□□ -2.02
U3KQE9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.46□□□□□ -2.02
U3KQE9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
U3KQE9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
U3KQE9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
U3KQE9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
U3KQE9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
U3KQE9 SNORD116-10-201ENST00000363791 102 ntBASIC2.45□□□□□ -2.02
U3KQE9 RNU6-1276P-201ENST00000365372 104 ntBASIC2.45□□□□□ -2.02
U3KQE9 RNU6-1124P-201ENST00000384169 107 ntBASIC2.45□□□□□ -2.02
U3KQE9 RNU6-616P-201ENST00000384353 107 ntBASIC2.45□□□□□ -2.02
U3KQE9 SNORA26.6-201ENST00000391256 115 ntBASIC2.45□□□□□ -2.02
U3KQE9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
U3KQE9 AC092427.1-202ENST00000430569 476 ntBASIC2.45□□□□□ -2.02
U3KQE9 HSPE1P9-201ENST00000440046 311 ntBASIC2.45□□□□□ -2.02
U3KQE9 AC104389.3-201ENST00000445629 235 ntBASIC2.45□□□□□ -2.02
U3KQE9 RPL39P39-201ENST00000455840 151 ntBASIC2.45□□□□□ -2.02
U3KQE9 RNU7-67P-201ENST00000459003 62 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms