Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 Y_RNA.621-201ENST00000411065 96 ntBASIC1.64□□□□□ -2.15
SNX9Q9Y5X1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.64□□□□□ -2.15
SNX9Q9Y5X1 RNU7-28P-201ENST00000516759 62 ntBASIC1.64□□□□□ -2.15
SNX9Q9Y5X1 RNA5SP481-201ENST00000516814 122 ntBASIC1.64□□□□□ -2.15
SNX9Q9Y5X1 RNU2-56P-201ENST00000516826 190 ntBASIC1.64□□□□□ -2.15
SNX9Q9Y5X1 RPL23AP91-201ENST00000569211 455 ntBASIC1.64□□□□□ -2.15
SNX9Q9Y5X1 Z83818.1-201ENST00000603584 150 ntBASIC1.64□□□□□ -2.15
SNX9Q9Y5X1 MIR8074-201ENST00000615081 81 ntBASIC1.64□□□□□ -2.15
SNX9Q9Y5X1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 MIR367-201ENST00000362299 68 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 U8.5-201ENST00000364528 136 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.435-201ENST00000384095 112 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 MIR194-1-201ENST00000384892 85 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 MIR616-201ENST00000385293 97 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 MT-TT-201ENST00000387460 66 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 RNA5SP496-201ENST00000391240 109 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 RNA5SP482-201ENST00000391269 118 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 RNU4-62P-201ENST00000410125 130 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 RN7SKP200-201ENST00000410564 320 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 RNU2-7P-201ENST00000410794 178 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 FTH1P12-201ENST00000432137 551 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 AL603825.1-201ENST00000438481 80 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 STAG3L5P-204ENST00000443759 179 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 snoU13.27-201ENST00000459278 104 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 SNORA81.3-201ENST00000517283 198 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 AC022559.1-201ENST00000520905 205 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 MIR2681-201ENST00000581814 105 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 AC021506.2-201ENST00000612354 169 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 AC004792.1-201ENST00000614523 137 ntBASIC1.63□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.62□□□□□ -2.15
SNX9Q9Y5X1 RNU4-17P-201ENST00000365598 141 ntBASIC1.62□□□□□ -2.15
SNX9Q9Y5X1 MIR1304-201ENST00000408243 91 ntBASIC1.62□□□□□ -2.15
SNX9Q9Y5X1 AL161935.2-201ENST00000414627 60 ntBASIC1.62□□□□□ -2.15
SNX9Q9Y5X1 SNRPGP10-201ENST00000432323 225 ntBASIC1.62□□□□□ -2.15
SNX9Q9Y5X1 AL138752.1-201ENST00000452964 351 ntBASIC1.62□□□□□ -2.15
SNX9Q9Y5X1 AC095038.3-201ENST00000634439 195 ntBASIC1.62□□□□□ -2.15
SNX9Q9Y5X1 AL442644.1-201ENST00000454390 3105 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.7-201ENST00000362352 102 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.29-201ENST00000362570 113 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.238-201ENST00000364441 102 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 RNU6-203P-201ENST00000384038 104 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 RNU6-439P-201ENST00000384188 106 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 RNU6-950P-201ENST00000384651 107 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.571-201ENST00000384753 98 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 U8.16-201ENST00000391279 133 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 RN7SKP51-201ENST00000410781 304 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 CALM2P4-201ENST00000430810 426 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 AC245047.8-201ENST00000456455 284 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 RNU7-120P-201ENST00000459334 63 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 RN7SKP164-201ENST00000516138 266 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 RNU6-561P-201ENST00000516222 102 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 RNU2-4P-201ENST00000606190 192 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 AL391903.3-201ENST00000612158 163 ntBASIC1.61□□□□□ -2.15
SNX9Q9Y5X1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.121-201ENST00000363309 113 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 RNU6-682P-201ENST00000363843 106 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 SNORD50B-201ENST00000364995 70 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 RNU6-424P-201ENST00000384367 105 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 AL034345.1-201ENST00000407768 123 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 MTND5P15-201ENST00000434246 349 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 RNU1-98P-201ENST00000458992 160 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 AC023790.1-201ENST00000482174 347 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 RNA5SP168-201ENST00000516642 112 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 SNORA31.24-201ENST00000517232 57 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 MIR4709-201ENST00000577272 72 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 SNORA77B-201ENST00000578179 125 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 MIR3668-201ENST00000582138 75 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 SNORA28-201ENST00000606769 126 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 uc_338.4-201ENST00000616635 176 ntBASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.6□□□□□ -2.15
SNX9Q9Y5X1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 SNORD68-201ENST00000363214 84 ntBASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 RNU6-1020P-201ENST00000363684 107 ntBASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.233-201ENST00000364407 101 ntBASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 RNU6-1228P-201ENST00000391014 107 ntBASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 AL606845.1-201ENST00000404881 255 ntBASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 Y_RNA.793-201ENST00000411222 111 ntBASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 AL354695.1-201ENST00000427935 228 ntBASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 SNRPGP8-201ENST00000454064 226 ntBASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 MIR4744-201ENST00000581563 82 ntBASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 MIR4422-201ENST00000581938 83 ntBASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 AL049861.1-201ENST00000603130 150 ntBASIC1.59□□□□□ -2.15
SNX9Q9Y5X1 RNY3P5-201ENST00000384127 102 ntBASIC1.58□□□□□ -2.16
SNX9Q9Y5X1 MT-TR-201ENST00000387439 65 ntBASIC1.58□□□□□ -2.16
SNX9Q9Y5X1 RNU6-578P-201ENST00000390980 103 ntBASIC1.58□□□□□ -2.16
SNX9Q9Y5X1 SNORD72-201ENST00000390994 80 ntBASIC1.58□□□□□ -2.16
SNX9Q9Y5X1 Y_RNA.587-201ENST00000391210 103 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms