Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 RNU6-414P-201ENST00000363705 104 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 STAG3L5P-204ENST00000443759 179 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 AL121914.1-201ENST00000450188 156 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 RNU7-34P-201ENST00000459394 64 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 RNA5SP182-201ENST00000516064 82 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 RNU6-561P-201ENST00000516222 102 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 AC022254.1-201ENST00000567857 235 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR4299-201ENST00000577899 72 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 MIR4662B-201ENST00000579498 81 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 AL627230.6-201ENST00000611129 280 ntBASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
PCDHGA2Q9Y5H1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
PCDHGA2Q9Y5H1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 MIR15B-201ENST00000385045 98 ntBASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 SNORA12.1-201ENST00000390873 148 ntBASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 MLLT10P1-201ENST00000418346 262 ntBASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 PGBD4P5-201ENST00000445958 426 ntBASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU7-149P-201ENST00000516739 59 ntBASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-1212P-201ENST00000517023 104 ntBASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 SNORA44.1-201ENST00000517031 108 ntBASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 AL160236.1-201ENST00000556317 195 ntBASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 AC008507.4-201ENST00000585464 127 ntBASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHGA2Q9Y5H1 SNORD45.3-201ENST00000363836 72 ntBASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 Y_RNA.357-201ENST00000365487 109 ntBASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-1062P-201ENST00000383908 107 ntBASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-484P-201ENST00000384016 107 ntBASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-394P-201ENST00000410735 107 ntBASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-1135P-201ENST00000411083 103 ntBASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU5E-9P-201ENST00000411164 104 ntBASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 MRPS17P9-201ENST00000511924 393 ntBASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-1299P-201ENST00000516316 100 ntBASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 RNA5SP153-201ENST00000516498 76 ntBASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 Pinc.1-201ENST00000616452 154 ntBASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.14□□□□□ -2.07
PCDHGA2Q9Y5H1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 MIR378A-201ENST00000362177 66 ntBASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU4-84P-201ENST00000364200 139 ntBASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 Y_RNA.355-201ENST00000365462 98 ntBASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 Y_RNA.432-201ENST00000384087 111 ntBASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 MIR499A-201ENST00000384903 122 ntBASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 Y_RNA.622-201ENST00000411091 108 ntBASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 SEPT7P4-201ENST00000437076 306 ntBASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 AL513423.1-201ENST00000621695 132 ntBASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 AC027279.3-201ENST00000625055 122 ntBASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PCDHGA2Q9Y5H1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHGA2Q9Y5H1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PCDHGA2Q9Y5H1 MIRLET7C-201ENST00000362160 84 ntBASIC2.12□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-1084P-201ENST00000362498 107 ntBASIC2.12□□□□□ -2.07
PCDHGA2Q9Y5H1 RNY1P10-201ENST00000363268 113 ntBASIC2.12□□□□□ -2.07
PCDHGA2Q9Y5H1 SNORD50B-201ENST00000364995 70 ntBASIC2.12□□□□□ -2.07
PCDHGA2Q9Y5H1 SNORA26-201ENST00000391286 122 ntBASIC2.12□□□□□ -2.07
PCDHGA2Q9Y5H1 SNORA79-201ENST00000408376 140 ntBASIC2.12□□□□□ -2.07
PCDHGA2Q9Y5H1 HMGN2P32-201ENST00000444648 269 ntBASIC2.12□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-197P-201ENST00000516680 100 ntBASIC2.12□□□□□ -2.07
PCDHGA2Q9Y5H1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.12□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-1123P-201ENST00000362347 106 ntBASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 Y_RNA.272-201ENST00000364696 102 ntBASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 snoU2-30.1-201ENST00000365012 70 ntBASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-643P-201ENST00000384018 107 ntBASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-239P-201ENST00000390990 99 ntBASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-321P-201ENST00000410912 106 ntBASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 CYCTP-201ENST00000504253 315 ntBASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 RNA5SP445-201ENST00000515889 115 ntBASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 AC097639.2-201ENST00000603159 172 ntBASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 AC021506.2-201ENST00000612354 169 ntBASIC2.11□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU6-424P-201ENST00000384367 105 ntBASIC2.1□□□□□ -2.07
PCDHGA2Q9Y5H1 MIR802-201ENST00000390235 94 ntBASIC2.1□□□□□ -2.07
PCDHGA2Q9Y5H1 JTBP1-201ENST00000441314 247 ntBASIC2.1□□□□□ -2.07
PCDHGA2Q9Y5H1 AC245517.4-201ENST00000448601 281 ntBASIC2.1□□□□□ -2.07
PCDHGA2Q9Y5H1 AC107027.2-201ENST00000512197 115 ntBASIC2.1□□□□□ -2.07
PCDHGA2Q9Y5H1 RNU7-121P-201ENST00000516604 62 ntBASIC2.1□□□□□ -2.07
PCDHGA2Q9Y5H1 SNORD45.4-201ENST00000516629 73 ntBASIC2.1□□□□□ -2.07
PCDHGA2Q9Y5H1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.09□□□□□ -2.07
PCDHGA2Q9Y5H1 MIR424-201ENST00000362227 98 ntBASIC2.09□□□□□ -2.07
PCDHGA2Q9Y5H1 Y_RNA.634-201ENST00000364811 113 ntBASIC2.09□□□□□ -2.07
PCDHGA2Q9Y5H1 Y_RNA.336-201ENST00000365307 109 ntBASIC2.09□□□□□ -2.07
PCDHGA2Q9Y5H1 Y_RNA.486-201ENST00000384398 107 ntBASIC2.09□□□□□ -2.07
PCDHGA2Q9Y5H1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PCDHGA2Q9Y5H1 SNORD72-201ENST00000390994 80 ntBASIC2.09□□□□□ -2.07
PCDHGA2Q9Y5H1 Y_RNA.580-201ENST00000391004 95 ntBASIC2.09□□□□□ -2.07
PCDHGA2Q9Y5H1 AC099513.1-201ENST00000490423 301 ntBASIC2.09□□□□□ -2.07
PCDHGA2Q9Y5H1 RNA5SP168-201ENST00000516642 112 ntBASIC2.09□□□□□ -2.07
PCDHGA2Q9Y5H1 MIR3144-201ENST00000579460 79 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms