Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 MIR22-201ENST00000362190 85 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 MIR422A-201ENST00000362286 90 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 Y_RNA.190-201ENST00000363964 101 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 SNORA54-201ENST00000384281 123 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 SNORA7.5-201ENST00000410672 110 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 POLR2J4-204ENST00000418424 324 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 MRPL35P3-201ENST00000421557 364 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 AL353813.1-201ENST00000440700 253 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 AC091826.1-201ENST00000514065 313 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 AC007536.1-201ENST00000533382 349 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 ZNF861P-201ENST00000588126 639 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 AL162274.2-201ENST00000614406 332 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 AC091304.10-201ENST00000641554 121 ntBASIC3.09□□□□□ -1.91
PCDHGC4Q9Y5F7 SNORA25.6-201ENST00000364121 118 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 Y_RNA.244-201ENST00000364484 109 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 Y_RNA.299-201ENST00000364973 94 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-163P-201ENST00000384396 106 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-679P-201ENST00000391003 106 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 RNA5SP109-201ENST00000391010 116 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 MIR1262-201ENST00000408276 93 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 RN7SKP220-201ENST00000410611 288 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-402P-201ENST00000410678 103 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 RN7SL20P-201ENST00000488827 297 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 RNA5SP341-201ENST00000516261 117 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 AC092881.1-201ENST00000638218 2733 ntBASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHGC4Q9Y5F7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-787P-201ENST00000384032 107 ntBASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-675P-201ENST00000384236 104 ntBASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-220P-201ENST00000390919 107 ntBASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU4-69P-201ENST00000410677 143 ntBASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 COTL1P1-201ENST00000422309 375 ntBASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 STAG3L5P-204ENST00000443759 179 ntBASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 RPL23AP63-201ENST00000498752 471 ntBASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 AC090821.2-201ENST00000523552 176 ntBASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 AC006386.2-201ENST00000624491 75 ntBASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 AC012005.1-201ENST00000624575 75 ntBASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 MIR7153-201ENST00000637758 57 ntBASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHGC4Q9Y5F7 Y_RNA.171-201ENST00000363760 102 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 RNA5SP493-201ENST00000364115 91 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 Y_RNA.221-201ENST00000364248 96 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORA71.1-201ENST00000364523 117 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD45B-201ENST00000364617 72 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD116-22-201ENST00000384430 92 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 AC003685.2-201ENST00000422795 395 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU2-11P-201ENST00000459191 187 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU7-113P-201ENST00000459273 62 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU7-45P-201ENST00000459460 63 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 MIR3124-201ENST00000582636 67 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 MIR4325-201ENST00000583049 90 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 AC007318.2-201ENST00000620999 243 ntBASIC3.06□□□□□ -1.92
PCDHGC4Q9Y5F7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 AC073325.2-201ENST00000339545 159 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-34-201ENST00000362441 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-12-201ENST00000362583 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-29-201ENST00000362834 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-9-201ENST00000362912 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-21-201ENST00000362963 81 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-14-201ENST00000363090 81 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 Y_RNA.96-201ENST00000363092 109 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-13-201ENST00000363358 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-41-201ENST00000363608 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-11-201ENST00000363616 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-5-201ENST00000363633 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-39-201ENST00000363694 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-4-201ENST00000363810 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-16-201ENST00000363887 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-6-201ENST00000363942 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-42-201ENST00000364273 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-15-201ENST00000364809 81 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-1-201ENST00000364961 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-26-201ENST00000365067 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-10-201ENST00000365073 81 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-43-201ENST00000365503 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 SNORD115-36-201ENST00000365629 82 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-805P-201ENST00000365643 106 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU6-267P-201ENST00000516714 103 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 RNU7-181P-201ENST00000517234 74 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.05□□□□□ -1.92
PCDHGC4Q9Y5F7 AC096644.4-201ENST00000563417 2912 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms