Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
AP4E1Q9UPM8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
AP4E1Q9UPM8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
AP4E1Q9UPM8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
AP4E1Q9UPM8 MIR488-201ENST00000365739 83 ntBASIC2.79□□□□□ -1.96
AP4E1Q9UPM8 MIR548D2-201ENST00000384955 97 ntBASIC2.79□□□□□ -1.96
AP4E1Q9UPM8 MIR590-201ENST00000385008 97 ntBASIC2.79□□□□□ -1.96
AP4E1Q9UPM8 RNU6-440P-201ENST00000390882 105 ntBASIC2.79□□□□□ -1.96
AP4E1Q9UPM8 AC087499.4-201ENST00000448505 178 ntBASIC2.79□□□□□ -1.96
AP4E1Q9UPM8 RNU7-70P-201ENST00000516941 66 ntBASIC2.79□□□□□ -1.96
AP4E1Q9UPM8 RNU6-844P-201ENST00000517175 102 ntBASIC2.79□□□□□ -1.96
AP4E1Q9UPM8 MIR4635-201ENST00000583759 79 ntBASIC2.79□□□□□ -1.96
AP4E1Q9UPM8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.79□□□□□ -1.96
AP4E1Q9UPM8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 RNA5SP109-201ENST00000391010 116 ntBASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 U8.17-201ENST00000391292 132 ntBASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 RNU6-109P-201ENST00000516364 107 ntBASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 RNU2-35P-201ENST00000516446 142 ntBASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 RNU6-184P-201ENST00000516514 107 ntBASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 RNU7-28P-201ENST00000516759 62 ntBASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 SNORA18.7-201ENST00000516910 131 ntBASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 MIR3683-201ENST00000580847 82 ntBASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 MIR4305-201ENST00000583252 102 ntBASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
AP4E1Q9UPM8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 Y_RNA.78-201ENST00000362970 110 ntBASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 RNU6-23P-201ENST00000363283 107 ntBASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 Y_RNA.265-201ENST00000364677 108 ntBASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 AC092427.1-202ENST00000430569 476 ntBASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 AL445687.1-201ENST00000439946 251 ntBASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 RN7SKP132-201ENST00000516001 208 ntBASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 RNU6-158P-201ENST00000517104 100 ntBASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 AL033523.1-201ENST00000605153 153 ntBASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 Y_RNA.818-201ENST00000618813 71 ntBASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 AC006386.2-201ENST00000624491 75 ntBASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 AC012005.1-201ENST00000624575 75 ntBASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
AP4E1Q9UPM8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 MIRLET7C-201ENST00000362160 84 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 Y_RNA.351-201ENST00000365436 96 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 Y_RNA.558-201ENST00000384685 113 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 MIR9-1-201ENST00000385198 89 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 MIR759-201ENST00000390224 91 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 COTL1P1-201ENST00000422309 375 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 UBBP3-201ENST00000445497 241 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 RNU7-80P-201ENST00000459562 61 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 RNU6-904P-201ENST00000516206 101 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 RNU6-762P-201ENST00000517107 102 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 EIF4BP1-201ENST00000554881 351 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 MIR3163-201ENST00000581592 73 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 ELOCP29-201ENST00000588193 334 ntBASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP4E1Q9UPM8 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 SNORD56.5-201ENST00000364281 72 ntBASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 AL627390.1-201ENST00000396055 340 ntBASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 STAG3L5P-204ENST00000443759 179 ntBASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 AC114811.1-201ENST00000507207 168 ntBASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 SNORA31.4-201ENST00000516049 129 ntBASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 RNU6-1116P-201ENST00000517269 99 ntBASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 GTF3AP2-201ENST00000557014 266 ntBASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 HSPE1P19-201ENST00000603327 295 ntBASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 MIR8054-201ENST00000620877 86 ntBASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 AL596211.1-201ENST00000569873 2277 ntBASIC2.75□□□□□ -1.97
AP4E1Q9UPM8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
AP4E1Q9UPM8 RNU4-16P-201ENST00000364737 141 ntBASIC2.74□□□□□ -1.97
AP4E1Q9UPM8 Y_RNA.454-201ENST00000384224 113 ntBASIC2.74□□□□□ -1.97
AP4E1Q9UPM8 RNY4P29-201ENST00000410801 97 ntBASIC2.74□□□□□ -1.97
AP4E1Q9UPM8 SNORA59A-201ENST00000459326 152 ntBASIC2.74□□□□□ -1.97
AP4E1Q9UPM8 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.74□□□□□ -1.97
AP4E1Q9UPM8 RNU6-970P-201ENST00000516312 107 ntBASIC2.74□□□□□ -1.97
AP4E1Q9UPM8 AC078899.2-201ENST00000595282 212 ntBASIC2.74□□□□□ -1.97
AP4E1Q9UPM8 AL162726.3-218ENST00000636401 95 ntBASIC2.74□□□□□ -1.97
AP4E1Q9UPM8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
AP4E1Q9UPM8 Y_RNA.388-201ENST00000383919 113 ntBASIC2.73□□□□□ -1.97
AP4E1Q9UPM8 RNU1-109P-201ENST00000383960 147 ntBASIC2.73□□□□□ -1.97
AP4E1Q9UPM8 SNORA11.4-201ENST00000408823 129 ntBASIC2.73□□□□□ -1.97
AP4E1Q9UPM8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.73□□□□□ -1.97
AP4E1Q9UPM8 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.73□□□□□ -1.97
AP4E1Q9UPM8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.73□□□□□ -1.97
AP4E1Q9UPM8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.73□□□□□ -1.97
AP4E1Q9UPM8 AC141557.1-201ENST00000540982 400 ntBASIC2.73□□□□□ -1.97
AP4E1Q9UPM8 MIR7106-201ENST00000612419 65 ntBASIC2.73□□□□□ -1.97
AP4E1Q9UPM8 AL449363.1-201ENST00000617815 186 ntBASIC2.73□□□□□ -1.97
AP4E1Q9UPM8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
AP4E1Q9UPM8 AL365361.1-201ENST00000566942 3481 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms