Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC067747.1-201ENST00000608026 250 ntBASIC2.76□□□□□ -1.97
PCDHA4Q9UN74 MIR3670-4-201ENST00000612260 65 ntBASIC2.76□□□□□ -1.97
PCDHA4Q9UN74 MIR1291-201ENST00000627649 87 ntBASIC2.76□□□□□ -1.97
PCDHA4Q9UN74 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PCDHA4Q9UN74 Y_RNA.37-201ENST00000362606 108 ntBASIC2.75□□□□□ -1.97
PCDHA4Q9UN74 RNU6-1019P-201ENST00000364424 107 ntBASIC2.75□□□□□ -1.97
PCDHA4Q9UN74 Y_RNA.528-201ENST00000384575 108 ntBASIC2.75□□□□□ -1.97
PCDHA4Q9UN74 SNORA67.4-201ENST00000384688 142 ntBASIC2.75□□□□□ -1.97
PCDHA4Q9UN74 AC026436.1-201ENST00000510537 270 ntBASIC2.75□□□□□ -1.97
PCDHA4Q9UN74 MIR3613-201ENST00000579844 87 ntBASIC2.75□□□□□ -1.97
PCDHA4Q9UN74 AC103810.6-201ENST00000606708 136 ntBASIC2.75□□□□□ -1.97
PCDHA4Q9UN74 AL137067.1-201ENST00000615933 120 ntBASIC2.75□□□□□ -1.97
PCDHA4Q9UN74 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.75□□□□□ -1.97
PCDHA4Q9UN74 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 MIR21-201ENST00000362134 72 ntBASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 RNU1-91P-201ENST00000364746 163 ntBASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 SNORA2.2-201ENST00000365473 135 ntBASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 Y_RNA.366-201ENST00000365540 102 ntBASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 MIR23A-201ENST00000385245 73 ntBASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 RNA5SP136-201ENST00000410906 107 ntBASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 HMGN2P32-201ENST00000444648 269 ntBASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 RPS26P48-201ENST00000491713 339 ntBASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 AC234781.5-201ENST00000508429 271 ntBASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.74□□□□□ -1.97
PCDHA4Q9UN74 AC080100.1-201ENST00000624239 5356 ntBASIC2.73□□□□□ -1.97
PCDHA4Q9UN74 MIR6073-201ENST00000352083 89 ntBASIC2.73□□□□□ -1.97
PCDHA4Q9UN74 RNU6-147P-201ENST00000383983 107 ntBASIC2.73□□□□□ -1.97
PCDHA4Q9UN74 AL445646.1-201ENST00000431784 216 ntBASIC2.73□□□□□ -1.97
PCDHA4Q9UN74 STAG3L5P-204ENST00000443759 179 ntBASIC2.73□□□□□ -1.97
PCDHA4Q9UN74 RNA5SP137-201ENST00000516833 135 ntBASIC2.73□□□□□ -1.97
PCDHA4Q9UN74 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHA4Q9UN74 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHA4Q9UN74 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PCDHA4Q9UN74 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.72□□□□□ -1.97
PCDHA4Q9UN74 RNU6-938P-201ENST00000411285 103 ntBASIC2.72□□□□□ -1.97
PCDHA4Q9UN74 SNORA31.10-201ENST00000516482 106 ntBASIC2.72□□□□□ -1.97
PCDHA4Q9UN74 SNORD36C-201ENST00000516733 66 ntBASIC2.72□□□□□ -1.97
PCDHA4Q9UN74 MIR5094-201ENST00000578766 85 ntBASIC2.72□□□□□ -1.97
PCDHA4Q9UN74 SNORA28-201ENST00000606769 126 ntBASIC2.72□□□□□ -1.97
PCDHA4Q9UN74 AC046143.2-201ENST00000609789 160 ntBASIC2.72□□□□□ -1.97
PCDHA4Q9UN74 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDHA4Q9UN74 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHA4Q9UN74 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PCDHA4Q9UN74 MIRLET7C-201ENST00000362160 84 ntBASIC2.71□□□□□ -1.98
PCDHA4Q9UN74 Y_RNA.440-201ENST00000384120 114 ntBASIC2.71□□□□□ -1.98
PCDHA4Q9UN74 AC069257.2-201ENST00000441819 155 ntBASIC2.71□□□□□ -1.98
PCDHA4Q9UN74 UBE2DNL-203ENST00000474922 222 ntBASIC2.71□□□□□ -1.98
PCDHA4Q9UN74 AC114811.1-201ENST00000507207 168 ntBASIC2.71□□□□□ -1.98
PCDHA4Q9UN74 RNU6-240P-201ENST00000516098 97 ntBASIC2.71□□□□□ -1.98
PCDHA4Q9UN74 ZNF720P1-201ENST00000562403 1939 ntBASIC2.71□□□□□ -1.98
PCDHA4Q9UN74 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.7□□□□□ -1.98
PCDHA4Q9UN74 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PCDHA4Q9UN74 MIR597-201ENST00000384968 97 ntBASIC2.7□□□□□ -1.98
PCDHA4Q9UN74 MIR1283-2-201ENST00000408621 87 ntBASIC2.7□□□□□ -1.98
PCDHA4Q9UN74 RNA5SP492-201ENST00000411330 114 ntBASIC2.7□□□□□ -1.98
PCDHA4Q9UN74 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.7□□□□□ -1.98
PCDHA4Q9UN74 COX6CP6-201ENST00000490840 228 ntBASIC2.7□□□□□ -1.98
PCDHA4Q9UN74 RNU6-1116P-201ENST00000517269 99 ntBASIC2.7□□□□□ -1.98
PCDHA4Q9UN74 AC015726.2-201ENST00000620112 122 ntBASIC2.7□□□□□ -1.98
PCDHA4Q9UN74 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PCDHA4Q9UN74 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
PCDHA4Q9UN74 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 AC008555.8-201ENST00000623602 2168 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 RNA5SP289-201ENST00000362332 137 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 RNU6-1298P-201ENST00000362456 101 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 SNORA38-201ENST00000363946 132 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 SNORD56.5-201ENST00000364281 72 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 SNORD114-30-201ENST00000364448 72 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 RNU6-163P-201ENST00000384396 106 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 MIR570-201ENST00000384917 97 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 RNU11-3P-201ENST00000391111 133 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 AC087499.4-201ENST00000448505 178 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 RNA5SP24-201ENST00000516478 95 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 AP003484.1-201ENST00000530974 250 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 MIR4679-2-201ENST00000578358 77 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 AC010297.1-201ENST00000623948 149 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 AC027279.3-201ENST00000625055 122 ntBASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
PCDHA4Q9UN74 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PCDHA4Q9UN74 MIR449A-201ENST00000362113 91 ntBASIC2.68□□□□□ -1.98
PCDHA4Q9UN74 RNU6-349P-201ENST00000362402 107 ntBASIC2.68□□□□□ -1.98
PCDHA4Q9UN74 RNU4-82P-201ENST00000362443 140 ntBASIC2.68□□□□□ -1.98
PCDHA4Q9UN74 HSPE1P9-201ENST00000440046 311 ntBASIC2.68□□□□□ -1.98
PCDHA4Q9UN74 MIR5007-201ENST00000583098 95 ntBASIC2.68□□□□□ -1.98
PCDHA4Q9UN74 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PCDHA4Q9UN74 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PCDHA4Q9UN74 SNORA63D-201ENST00000364359 132 ntBASIC2.67□□□□□ -1.98
PCDHA4Q9UN74 Y_RNA.281-201ENST00000364774 94 ntBASIC2.67□□□□□ -1.98
PCDHA4Q9UN74 RNU1-51P-201ENST00000365345 176 ntBASIC2.67□□□□□ -1.98
PCDHA4Q9UN74 SNORD38C-201ENST00000384381 69 ntBASIC2.67□□□□□ -1.98
PCDHA4Q9UN74 RNA5SP181-201ENST00000410246 98 ntBASIC2.67□□□□□ -1.98
PCDHA4Q9UN74 RN7SKP200-201ENST00000410564 320 ntBASIC2.67□□□□□ -1.98
PCDHA4Q9UN74 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.67□□□□□ -1.98
PCDHA4Q9UN74 RNU7-70P-201ENST00000516941 66 ntBASIC2.67□□□□□ -1.98
PCDHA4Q9UN74 AC007012.1-201ENST00000567192 175 ntBASIC2.67□□□□□ -1.98
PCDHA4Q9UN74 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
PCDHA4Q9UN74 AL442644.1-201ENST00000454390 3105 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms