Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CNOT11Q9UKZ1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
CNOT11Q9UKZ1 MIR126-201ENST00000362291 85 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 RNU1-112P-201ENST00000364401 164 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 Y_RNA.290-201ENST00000364879 114 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 Y_RNA.298-201ENST00000364960 107 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 Y_RNA.500-201ENST00000384466 111 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 MIR548D2-201ENST00000384955 97 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 MIR218-1-201ENST00000384999 110 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
CNOT11Q9UKZ1 RNU6-816P-201ENST00000390914 107 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 RNU6-1268P-201ENST00000391214 107 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 RNU6-1239P-201ENST00000391310 107 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 RNA5SP21-201ENST00000410917 96 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 SNX2P2-201ENST00000424553 323 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 RPL39P39-201ENST00000455840 151 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 RNU6-126P-201ENST00000516685 103 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 RNU7-6P-201ENST00000516845 62 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 RNU7-70P-201ENST00000516941 66 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 DEFB131E-201ENST00000532329 154 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 MIR5197-201ENST00000583721 112 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 AC008507.4-201ENST00000585464 127 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 IGLL4P-201ENST00000614590 133 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 AC006435.5-201ENST00000624486 112 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 MIR2052-201ENST00000636055 55 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.53□□□□□ -2
CNOT11Q9UKZ1 MAPK10-266ENST00000641066 6555 ntBASIC2.53□□□□□ -2
CNOT11Q9UKZ1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 MIR302B-201ENST00000362188 73 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 SNORA67.1-201ENST00000364749 141 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 Y_RNA.510-201ENST00000384511 114 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 Y_RNA.531-201ENST00000384589 121 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 RNU6-644P-201ENST00000391155 98 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 MIR548O-201ENST00000408583 114 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 RNU7-26P-201ENST00000458980 63 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 RNU6-991P-201ENST00000516168 107 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 RNU7-25P-201ENST00000516544 62 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 SNORD36C-201ENST00000516733 66 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 uc_338.14-201ENST00000613162 166 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.52□□□□□ -2.01
CNOT11Q9UKZ1 Y_RNA.244-201ENST00000364484 109 ntBASIC2.51□□□□□ -2.01
CNOT11Q9UKZ1 SNORD24-201ENST00000383884 75 ntBASIC2.51□□□□□ -2.01
CNOT11Q9UKZ1 RNU6-813P-201ENST00000384691 107 ntBASIC2.51□□□□□ -2.01
CNOT11Q9UKZ1 MIR9-1-201ENST00000385198 89 ntBASIC2.51□□□□□ -2.01
CNOT11Q9UKZ1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.51□□□□□ -2.01
CNOT11Q9UKZ1 AC009238.1-201ENST00000442165 424 ntBASIC2.51□□□□□ -2.01
CNOT11Q9UKZ1 AC009237.6-201ENST00000446969 424 ntBASIC2.51□□□□□ -2.01
CNOT11Q9UKZ1 RNU6-65P-201ENST00000516332 98 ntBASIC2.51□□□□□ -2.01
CNOT11Q9UKZ1 SNORA31.11-201ENST00000516528 139 ntBASIC2.51□□□□□ -2.01
CNOT11Q9UKZ1 RNU6-586P-201ENST00000517265 104 ntBASIC2.51□□□□□ -2.01
CNOT11Q9UKZ1 MIR4319-201ENST00000577285 85 ntBASIC2.51□□□□□ -2.01
CNOT11Q9UKZ1 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
CNOT11Q9UKZ1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 AC062016.1-201ENST00000355719 319 ntBASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 RNU6-349P-201ENST00000362402 107 ntBASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 Y_RNA.93-201ENST00000363066 109 ntBASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 Y_RNA.466-201ENST00000384294 113 ntBASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 RNA5SP467-201ENST00000391274 118 ntBASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 SCARNA23-201ENST00000516060 130 ntBASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 AC002984.1-201ENST00000591692 448 ntBASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 AL162726.3-218ENST00000636401 95 ntBASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.5□□□□□ -2.01
CNOT11Q9UKZ1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 SNORD68-201ENST00000363214 84 ntBASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 RNU4-36P-201ENST00000364294 144 ntBASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 AC108938.1-201ENST00000451204 136 ntBASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 SNORD109B-201ENST00000458961 67 ntBASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 SNORD109A-201ENST00000459128 67 ntBASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 RPS26P48-201ENST00000491713 339 ntBASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 RNU2-35P-201ENST00000516446 142 ntBASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 U7.3-201ENST00000616123 62 ntBASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 AC012531.4-201ENST00000616509 177 ntBASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CNOT11Q9UKZ1 Y_RNA.78-201ENST00000362970 110 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 RNU1-72P-201ENST00000362976 153 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 SNORA33-201ENST00000363664 130 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 RNU1-133P-201ENST00000364867 167 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 RNU6-1189P-201ENST00000383958 107 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 RNY1P6-201ENST00000384193 109 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 SNORA80E-201ENST00000384744 137 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 MIR520G-201ENST00000385064 90 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 RNA5SP210-201ENST00000391034 120 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 RNA5SP184-201ENST00000411071 108 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 AC060773.1-201ENST00000421698 310 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 AC011753.1-201ENST00000451001 220 ntBASIC2.48□□□□□ -2.01
CNOT11Q9UKZ1 AC113410.1-201ENST00000505029 247 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms