Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RNU6-252P-201ENST00000363232 107 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 MTND4P25-201ENST00000441039 533 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 MIR4490-201ENST00000582647 84 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.45□□□□□ -2.64
CHD7Q9P2D1 RNU6-701P-201ENST00000384059 107 ntBASIC-1.45□□□□□ -2.64
CHD7Q9P2D1 RNU6-378P-201ENST00000384324 107 ntBASIC-1.45□□□□□ -2.64
CHD7Q9P2D1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.45□□□□□ -2.64
CHD7Q9P2D1 MIR4438-201ENST00000585271 93 ntBASIC-1.45□□□□□ -2.64
CHD7Q9P2D1 U6.73-201ENST00000619194 103 ntBASIC-1.45□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.45□□□□□ -2.64
CHD7Q9P2D1 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.45□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.623-201ENST00000411128 95 ntBASIC-1.45□□□□□ -2.64
CHD7Q9P2D1 SNRPGP14-201ENST00000435400 219 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 AL353691.2-201ENST00000443795 59 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 SEPT14P24-201ENST00000447236 180 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 SEPT14P4-201ENST00000513445 186 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 AC091178.2-201ENST00000584401 117 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 AC092608.3-201ENST00000625017 386 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 RNU6-79P-201ENST00000362511 107 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 RNU6-223P-201ENST00000362830 107 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 Z98949.2-201ENST00000440996 144 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 AC116353.2-201ENST00000505332 712 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 MTND5P40-201ENST00000559945 246 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 AC012531.4-201ENST00000616509 177 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 U4.1-201ENST00000620349 87 ntBASIC-1.46□□□□□ -2.64
CHD7Q9P2D1 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 MTND1P21-201ENST00000412991 285 ntBASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 AL358944.1-201ENST00000528537 144 ntBASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 MTND3P13-201ENST00000574391 343 ntBASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 AC011374.2-201ENST00000607135 526 ntBASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 AC091948.2-201ENST00000636510 279 ntBASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 AL603914.1-201ENST00000401964 204 ntBASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 RNU6-221P-201ENST00000459541 99 ntBASIC-1.47□□□□□ -2.64
CHD7Q9P2D1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.47□□□□□ -2.65
CHD7Q9P2D1 HMGN2P32-201ENST00000444648 269 ntBASIC-1.47□□□□□ -2.65
CHD7Q9P2D1 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.48□□□□□ -2.65
CHD7Q9P2D1 RNU6-291P-201ENST00000384720 107 ntBASIC-1.48□□□□□ -2.65
CHD7Q9P2D1 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.48□□□□□ -2.65
CHD7Q9P2D1 SNRPGP8-201ENST00000454064 226 ntBASIC-1.48□□□□□ -2.65
CHD7Q9P2D1 SNORD123-201ENST00000459473 70 ntBASIC-1.48□□□□□ -2.65
CHD7Q9P2D1 FGF7P4-201ENST00000509595 295 ntBASIC-1.48□□□□□ -2.65
CHD7Q9P2D1 FTX_4.1-201ENST00000616291 147 ntBASIC-1.48□□□□□ -2.65
CHD7Q9P2D1 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.48□□□□□ -2.65
CHD7Q9P2D1 snoZ196.1-201ENST00000625269 89 ntBASIC-1.48□□□□□ -2.65
CHD7Q9P2D1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-1.49□□□□□ -2.65
CHD7Q9P2D1 AC108059.2-201ENST00000434626 151 ntBASIC-1.49□□□□□ -2.65
CHD7Q9P2D1 BNIP3P9-201ENST00000603714 553 ntBASIC-1.49□□□□□ -2.65
CHD7Q9P2D1 MIR626-201ENST00000385032 94 ntBASIC-1.49□□□□□ -2.65
CHD7Q9P2D1 AL035461.1-201ENST00000421490 332 ntBASIC-1.49□□□□□ -2.65
CHD7Q9P2D1 AC236972.2-201ENST00000434979 310 ntBASIC-1.49□□□□□ -2.65
CHD7Q9P2D1 AC026414.1-201ENST00000504046 698 ntBASIC-1.49□□□□□ -2.65
CHD7Q9P2D1 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.49□□□□□ -2.65
CHD7Q9P2D1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.49□□□□□ -2.65
CHD7Q9P2D1 AL137161.1-201ENST00000532231 390 ntBASIC-1.49□□□□□ -2.65
CHD7Q9P2D1 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 RNU6-571P-201ENST00000384128 107 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 MIR586-201ENST00000385035 97 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 RNU2-29P-201ENST00000410423 189 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 RPL30P16-201ENST00000419341 429 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 AC244670.1-201ENST00000436879 112 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 NDUFA5P7-201ENST00000452914 242 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 LARP7P2-201ENST00000575306 125 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 AC080013.3-201ENST00000606839 578 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 SNORA62.4-201ENST00000365504 151 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 MTATP6P18-201ENST00000417994 673 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 AC090616.4-201ENST00000448026 115 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 snoU13.8-201ENST00000458890 104 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 RNU7-182P-201ENST00000459009 62 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 MIR4791-201ENST00000607666 84 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 RNU4-55P-201ENST00000410731 137 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 RNU6-847P-201ENST00000411115 108 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 Y_RNA.687-201ENST00000516558 91 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 AC090616.2-202ENST00000584248 222 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 AL450270.1-201ENST00000606160 391 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 MIR6773-201ENST00000612812 74 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.5□□□□□ -2.65
CHD7Q9P2D1 Y_RNA.33-201ENST00000362591 102 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 RNU6-552P-201ENST00000362869 119 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 RNU6-395P-201ENST00000365662 106 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 MIR599-201ENST00000385069 95 ntBASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
CHD7Q9P2D1 RNU6-966P-201ENST00000516479 104 ntBASIC-1.51□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms