Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 MIR424-201ENST00000362227 98 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 RNU6-1123P-201ENST00000362347 106 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 SNORD50B-201ENST00000364995 70 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 Y_RNA.338-201ENST00000365320 114 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 Y_RNA.357-201ENST00000365487 109 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 RNU6-643P-201ENST00000384018 107 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 RNU4-52P-201ENST00000384209 138 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 MIR660-201ENST00000385235 97 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 MIR891A-201ENST00000401237 79 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 RNA5SP338-201ENST00000410495 85 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 RNU2-70P-201ENST00000410718 179 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 RN7SKP51-201ENST00000410781 304 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 AL356379.1-201ENST00000414105 126 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 AC107027.2-201ENST00000512197 115 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 RNU6-197P-201ENST00000516680 100 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 AC009831.4-201ENST00000620744 325 ntBASIC2.09□□□□□ -2.07
CCM2LQ9NUG4 RNU6-833P-201ENST00000363486 107 ntBASIC2.08□□□□□ -2.08
CCM2LQ9NUG4 SNORD72-201ENST00000390994 80 ntBASIC2.08□□□□□ -2.08
CCM2LQ9NUG4 SEPT7P4-201ENST00000437076 306 ntBASIC2.08□□□□□ -2.08
CCM2LQ9NUG4 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
CCM2LQ9NUG4 AC114811.1-201ENST00000507207 168 ntBASIC2.08□□□□□ -2.08
CCM2LQ9NUG4 RNU7-12P-201ENST00000516030 62 ntBASIC2.08□□□□□ -2.08
CCM2LQ9NUG4 RNU6-561P-201ENST00000516222 102 ntBASIC2.08□□□□□ -2.08
CCM2LQ9NUG4 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
CCM2LQ9NUG4 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
CCM2LQ9NUG4 AC046143.2-201ENST00000609789 160 ntBASIC2.08□□□□□ -2.08
CCM2LQ9NUG4 AL627230.6-201ENST00000611129 280 ntBASIC2.08□□□□□ -2.08
CCM2LQ9NUG4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
CCM2LQ9NUG4 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
CCM2LQ9NUG4 JTBP1-201ENST00000441314 247 ntBASIC2.07□□□□□ -2.08
CCM2LQ9NUG4 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
CCM2LQ9NUG4 SNRPGP8-201ENST00000454064 226 ntBASIC2.07□□□□□ -2.08
CCM2LQ9NUG4 HMGN2P23-201ENST00000456759 269 ntBASIC2.07□□□□□ -2.08
CCM2LQ9NUG4 AC074198.2-201ENST00000508153 258 ntBASIC2.07□□□□□ -2.08
CCM2LQ9NUG4 AC097639.2-201ENST00000603159 172 ntBASIC2.07□□□□□ -2.08
CCM2LQ9NUG4 SNORD3E-202ENST00000627253 216 ntBASIC2.07□□□□□ -2.08
CCM2LQ9NUG4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CCM2LQ9NUG4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.06□□□□□ -2.08
CCM2LQ9NUG4 Y_RNA.441-201ENST00000384123 112 ntBASIC2.06□□□□□ -2.08
CCM2LQ9NUG4 RNU6-439P-201ENST00000384188 106 ntBASIC2.06□□□□□ -2.08
CCM2LQ9NUG4 SNORA48.3-201ENST00000391081 134 ntBASIC2.06□□□□□ -2.08
CCM2LQ9NUG4 MIR1267-201ENST00000408723 78 ntBASIC2.06□□□□□ -2.08
CCM2LQ9NUG4 RNU6-1135P-201ENST00000411083 103 ntBASIC2.06□□□□□ -2.08
CCM2LQ9NUG4 RNU5E-9P-201ENST00000411164 104 ntBASIC2.06□□□□□ -2.08
CCM2LQ9NUG4 RPL23AP42-201ENST00000471152 471 ntBASIC2.06□□□□□ -2.08
CCM2LQ9NUG4 RNU6-365P-201ENST00000517113 106 ntBASIC2.06□□□□□ -2.08
CCM2LQ9NUG4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CCM2LQ9NUG4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCM2LQ9NUG4 Y_RNA.4-201ENST00000362333 112 ntBASIC2.05□□□□□ -2.08
CCM2LQ9NUG4 RNU4-84P-201ENST00000364200 139 ntBASIC2.05□□□□□ -2.08
CCM2LQ9NUG4 Y_RNA.634-201ENST00000364811 113 ntBASIC2.05□□□□□ -2.08
CCM2LQ9NUG4 AC006461.1-201ENST00000412637 326 ntBASIC2.05□□□□□ -2.08
CCM2LQ9NUG4 RNU6-1116P-201ENST00000517269 99 ntBASIC2.05□□□□□ -2.08
CCM2LQ9NUG4 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
CCM2LQ9NUG4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.04□□□□□ -2.08
CCM2LQ9NUG4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCM2LQ9NUG4 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
CCM2LQ9NUG4 Y_RNA.464-201ENST00000384282 110 ntBASIC2.04□□□□□ -2.08
CCM2LQ9NUG4 Y_RNA.486-201ENST00000384398 107 ntBASIC2.04□□□□□ -2.08
CCM2LQ9NUG4 MIR452-201ENST00000385020 85 ntBASIC2.04□□□□□ -2.08
CCM2LQ9NUG4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CCM2LQ9NUG4 MIR514B-201ENST00000516774 80 ntBASIC2.04□□□□□ -2.08
CCM2LQ9NUG4 SNORA44.1-201ENST00000517031 108 ntBASIC2.04□□□□□ -2.08
CCM2LQ9NUG4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.04□□□□□ -2.08
CCM2LQ9NUG4 MIR8074-201ENST00000615081 81 ntBASIC2.04□□□□□ -2.08
CCM2LQ9NUG4 Y_RNA.91-201ENST00000363042 107 ntBASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 Y_RNA.272-201ENST00000364696 102 ntBASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 SNORD24-201ENST00000383884 75 ntBASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 RNU6-203P-201ENST00000384038 104 ntBASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 SNORD38C-201ENST00000384381 69 ntBASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 RNU6-239P-201ENST00000390990 99 ntBASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 RNU6-504P-201ENST00000516568 104 ntBASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 AC006441.5-201ENST00000612680 209 ntBASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CCM2LQ9NUG4 Y_RNA.337-201ENST00000365312 102 ntBASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 MIR194-1-201ENST00000384892 85 ntBASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 AC004965.1-201ENST00000413033 213 ntBASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 AL161935.2-201ENST00000414627 60 ntBASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 SNRPGP13-201ENST00000442212 177 ntBASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 RNA5SP200-201ENST00000516360 103 ntBASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 MIR4778-201ENST00000577635 80 ntBASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 MIR378D2-201ENST00000580636 98 ntBASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 AC002984.1-201ENST00000591692 448 ntBASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 MIR7111-201ENST00000619751 72 ntBASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.02□□□□□ -2.09
CCM2LQ9NUG4 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CCM2LQ9NUG4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 206.9 ms