Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 SNORD115-25-201ENST00000362619 82 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-1169P-201ENST00000363537 103 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SKP103-201ENST00000363848 320 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 SNORD60-201ENST00000383903 83 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 SNORA70-201ENST00000384436 135 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 Y_RNA.500-201ENST00000384466 111 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR519E-201ENST00000385075 84 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 MT-TY-201ENST00000387409 66 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-220P-201ENST00000390919 107 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 CYP2C59P-201ENST00000457790 269 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 snoU13.29-201ENST00000459370 104 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SL75P-201ENST00000461926 281 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RPS17P15-201ENST00000475609 349 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 AC006539.1-201ENST00000481419 501 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SL591P-201ENST00000496150 292 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-916P-201ENST00000516088 109 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU1-41P-201ENST00000516161 162 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU1-48P-201ENST00000516400 162 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 Y_RNA.699-201ENST00000516803 93 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP34-201ENST00000516887 130 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 IGHV1-14-201ENST00000523391 241 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 AP004607.2-201ENST00000533949 322 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 AC010547.6-201ENST00000571789 193 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR3935-201ENST00000583472 104 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RMST_2.1-201ENST00000617263 136 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR6740-201ENST00000618268 113 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 AC090517.3-201ENST00000625170 141 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 Z82217.1-201ENST00000625157 8149 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 MAPK10-320ENST00000641462 6696 ntBASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
KRTAP4-4Q9BYR3 DOCK11P1-201ENST00000553480 5932 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP388-201ENST00000362584 119 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP319-201ENST00000362768 119 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-403P-201ENST00000363163 104 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP132-201ENST00000364725 118 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP211-201ENST00000365516 117 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 SNORA56-201ENST00000383966 129 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU1-106P-201ENST00000384382 164 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 SNORA25-201ENST00000384384 134 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU6-1340P-201ENST00000384438 107 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 Y_RNA.566-201ENST00000384735 101 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR130A-201ENST00000385274 89 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 MIR591-201ENST00000385290 95 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP91-201ENST00000390902 119 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 AL133270.1-201ENST00000402635 279 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 MRM2-202ENST00000407040 582 ntTSL 3 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNY3P8-201ENST00000411366 126 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RHEBP3-201ENST00000411920 351 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 CST2P1-201ENST00000425770 87 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 AL606517.2-201ENST00000442855 241 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 AC244505.6-201ENST00000452829 130 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SL583P-201ENST00000475692 287 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 BX284632.1-201ENST00000478218 541 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RN7SL570P-201ENST00000484405 292 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 PHBP14-201ENST00000512887 367 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNA5SP445-201ENST00000515889 115 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 RNU7-12P-201ENST00000516030 62 ntBASIC1□□□□□ -2.25
KRTAP4-4Q9BYR3 SCARNA18.1-201ENST00000516330 83 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms