Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.34□□□□□ -2.03
LRFN3Q9BTN0 RNU6-429P-201ENST00000384582 108 ntBASIC2.34□□□□□ -2.03
LRFN3Q9BTN0 MIR562-201ENST00000384894 95 ntBASIC2.34□□□□□ -2.03
LRFN3Q9BTN0 MIR597-201ENST00000384968 97 ntBASIC2.34□□□□□ -2.03
LRFN3Q9BTN0 SNORA48.1-201ENST00000390879 135 ntBASIC2.34□□□□□ -2.03
LRFN3Q9BTN0 RNU2-55P-201ENST00000411146 174 ntBASIC2.34□□□□□ -2.03
LRFN3Q9BTN0 AC097462.1-201ENST00000514125 324 ntBASIC2.34□□□□□ -2.03
LRFN3Q9BTN0 Y_RNA.712-201ENST00000517011 92 ntBASIC2.34□□□□□ -2.03
LRFN3Q9BTN0 AL049861.1-201ENST00000603130 150 ntBASIC2.34□□□□□ -2.03
LRFN3Q9BTN0 RNU6-235P-201ENST00000362644 107 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 RNU1-22P-201ENST00000363334 158 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 RNU4-13P-201ENST00000364019 141 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 RNU6-978P-201ENST00000364371 103 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 RNU6-1019P-201ENST00000364424 107 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 RNU6-136P-201ENST00000384663 107 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 RNU6-1064P-201ENST00000410626 104 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 AP1B1P2-201ENST00000416196 106 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 SNORA9.3-201ENST00000516383 129 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 AL160236.1-201ENST00000556317 195 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 AL929325.1-201ENST00000603096 117 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 AC010297.1-201ENST00000623948 149 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.33□□□□□ -2.04
LRFN3Q9BTN0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 SNORA63.4-201ENST00000362763 126 ntBASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 Y_RNA.432-201ENST00000384087 111 ntBASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 SNORA72-201ENST00000384339 132 ntBASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 RNY4P18-201ENST00000391107 89 ntBASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 MIR1276-201ENST00000408707 83 ntBASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 RNU6-1186P-201ENST00000410429 97 ntBASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 RNA5SP450-201ENST00000411206 102 ntBASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 AL158823.1-201ENST00000418441 478 ntBASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 AC055731.1-201ENST00000474387 401 ntBASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 RNU6-1299P-201ENST00000516316 100 ntBASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 MIR6504-201ENST00000613520 61 ntBASIC2.32□□□□□ -2.04
LRFN3Q9BTN0 SNORA25.7-201ENST00000364375 127 ntBASIC2.31□□□□□ -2.04
LRFN3Q9BTN0 RNU6-1080P-201ENST00000383982 107 ntBASIC2.31□□□□□ -2.04
LRFN3Q9BTN0 RNU1-138P-201ENST00000384093 164 ntBASIC2.31□□□□□ -2.04
LRFN3Q9BTN0 RNU6-1144P-201ENST00000384247 104 ntBASIC2.31□□□□□ -2.04
LRFN3Q9BTN0 SNORA8-201ENST00000384574 139 ntBASIC2.31□□□□□ -2.04
LRFN3Q9BTN0 RNU6-476P-201ENST00000384726 107 ntBASIC2.31□□□□□ -2.04
LRFN3Q9BTN0 PDCD5P2-201ENST00000507570 312 ntBASIC2.31□□□□□ -2.04
LRFN3Q9BTN0 MIR6129-201ENST00000616087 109 ntBASIC2.31□□□□□ -2.04
LRFN3Q9BTN0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.31□□□□□ -2.04
LRFN3Q9BTN0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
LRFN3Q9BTN0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LRFN3Q9BTN0 U8.1-201ENST00000362843 134 ntBASIC2.3□□□□□ -2.04
LRFN3Q9BTN0 RNA5SP467-201ENST00000391274 118 ntBASIC2.3□□□□□ -2.04
LRFN3Q9BTN0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.3□□□□□ -2.04
LRFN3Q9BTN0 AC099677.2-201ENST00000436385 175 ntBASIC2.3□□□□□ -2.04
LRFN3Q9BTN0 Y_RNA.757-201ENST00000578934 114 ntBASIC2.3□□□□□ -2.04
LRFN3Q9BTN0 MIR5007-201ENST00000583098 95 ntBASIC2.3□□□□□ -2.04
LRFN3Q9BTN0 AL049779.4-201ENST00000604500 156 ntBASIC2.3□□□□□ -2.04
LRFN3Q9BTN0 BX248123.2-201ENST00000606318 124 ntBASIC2.3□□□□□ -2.04
LRFN3Q9BTN0 uc_338.4-201ENST00000616635 176 ntBASIC2.3□□□□□ -2.04
LRFN3Q9BTN0 RMST_2.1-201ENST00000617263 136 ntBASIC2.3□□□□□ -2.04
LRFN3Q9BTN0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.3□□□□□ -2.04
LRFN3Q9BTN0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 Y_RNA.120-201ENST00000363304 110 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 Y_RNA.203-201ENST00000364106 102 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 Y_RNA.280-201ENST00000364765 112 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 MIR520G-201ENST00000385064 90 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 RNA5SP501-201ENST00000410990 112 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 RPS4XP11-201ENST00000446897 772 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 RN7SL297P-201ENST00000483161 293 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 RNU6-772P-201ENST00000516042 105 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 RNA5SP153-201ENST00000516498 76 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 Y_RNA.692-201ENST00000516627 105 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 RPL23AP91-201ENST00000569211 455 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 MIR5094-201ENST00000578766 85 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 AC022513.1-201ENST00000624512 117 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 MIR3914-2-201ENST00000637339 95 ntBASIC2.29□□□□□ -2.04
LRFN3Q9BTN0 RNU6-661P-201ENST00000362409 107 ntBASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 Y_RNA.91-201ENST00000363042 107 ntBASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 Y_RNA.634-201ENST00000364811 113 ntBASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 MIR221-201ENST00000385135 110 ntBASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 SNORA40.5-201ENST00000391061 128 ntBASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 RNU4-62P-201ENST00000410125 130 ntBASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 RNU2-70P-201ENST00000410718 179 ntBASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 AL158147.1-201ENST00000443970 75 ntBASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 SNORD11-201ENST00000459124 84 ntBASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 RPS26P45-201ENST00000471748 340 ntBASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 SNORD77.4-201ENST00000516158 81 ntBASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 MIR2681-201ENST00000581814 105 ntBASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
LRFN3Q9BTN0 RNU6-1209P-201ENST00000363655 107 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 SNORA6-201ENST00000384033 151 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 RNU6-950P-201ENST00000384651 107 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 SNORA40.18-201ENST00000391200 128 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 MLLT10P1-201ENST00000418346 262 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 POLR2J4-204ENST00000418424 324 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 AL445646.1-201ENST00000431784 216 ntBASIC2.27□□□□□ -2.05
LRFN3Q9BTN0 Y_RNA.709-201ENST00000516952 92 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms