Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 MIR4509-2-201ENST00000583920 94 ntBASIC-1.03□□□□□ -2.57
VPS25Q9BRG1 MIR4509-1-201ENST00000618224 94 ntBASIC-1.03□□□□□ -2.57
VPS25Q9BRG1 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.04□□□□□ -2.58
VPS25Q9BRG1 RNA5SP257-201ENST00000363023 116 ntBASIC-1.04□□□□□ -2.58
VPS25Q9BRG1 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.04□□□□□ -2.58
VPS25Q9BRG1 Y_RNA.167-201ENST00000363735 109 ntBASIC-1.04□□□□□ -2.58
VPS25Q9BRG1 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.04□□□□□ -2.58
VPS25Q9BRG1 RNU4-20P-201ENST00000365601 151 ntBASIC-1.04□□□□□ -2.58
VPS25Q9BRG1 MTCO1P20-201ENST00000425366 358 ntBASIC-1.04□□□□□ -2.58
VPS25Q9BRG1 AL033528.1-201ENST00000453780 140 ntBASIC-1.04□□□□□ -2.58
VPS25Q9BRG1 SNORA25.16-201ENST00000516741 121 ntBASIC-1.04□□□□□ -2.58
VPS25Q9BRG1 AC055872.1-201ENST00000570978 278 ntBASIC-1.04□□□□□ -2.58
VPS25Q9BRG1 MIR5696-201ENST00000578474 85 ntBASIC-1.04□□□□□ -2.58
VPS25Q9BRG1 AC006441.5-201ENST00000612680 209 ntBASIC-1.04□□□□□ -2.58
VPS25Q9BRG1 RNU6-82P-201ENST00000363970 107 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 Y_RNA.796-201ENST00000364268 102 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 Y_RNA.799-201ENST00000364992 102 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 RNU6-597P-201ENST00000365620 102 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 RNU6-38P-201ENST00000384085 107 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 RNU6-601P-201ENST00000384540 107 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 Y_RNA.547-201ENST00000384654 119 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 RNU4-63P-201ENST00000411313 118 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 MTND1P11-201ENST00000456661 876 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 AC107297.1-201ENST00000459991 176 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 SNORA40.9-201ENST00000515895 93 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 RNA5SP66-201ENST00000517178 101 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 AC087685.1-201ENST00000587507 141 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 JPX_2.1-201ENST00000614161 69 ntBASIC-1.05□□□□□ -2.58
VPS25Q9BRG1 RNU4-73P-201ENST00000363164 141 ntBASIC-1.06□□□□□ -2.58
VPS25Q9BRG1 Y_RNA.508-201ENST00000384502 114 ntBASIC-1.06□□□□□ -2.58
VPS25Q9BRG1 RNY1P7-201ENST00000384743 110 ntBASIC-1.06□□□□□ -2.58
VPS25Q9BRG1 MIR517A-201ENST00000385001 87 ntBASIC-1.06□□□□□ -2.58
VPS25Q9BRG1 MIR122-201ENST00000385044 85 ntBASIC-1.06□□□□□ -2.58
VPS25Q9BRG1 MIR1278-201ENST00000408753 81 ntBASIC-1.06□□□□□ -2.58
VPS25Q9BRG1 MTATP6P13-201ENST00000438531 667 ntBASIC-1.06□□□□□ -2.58
VPS25Q9BRG1 CHEK2P4-201ENST00000450340 246 ntBASIC-1.06□□□□□ -2.58
VPS25Q9BRG1 MIR3913-1-201ENST00000577744 102 ntBASIC-1.06□□□□□ -2.58
VPS25Q9BRG1 AC063944.3-201ENST00000609969 533 ntBASIC-1.06□□□□□ -2.58
VPS25Q9BRG1 RNU6-879P-201ENST00000364328 108 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 RNU4-66P-201ENST00000365199 138 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 RNU6-95P-201ENST00000384697 107 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 MIR513B-201ENST00000385136 84 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 SNORD37.1-201ENST00000390968 65 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 RNU2-61P-201ENST00000411069 191 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 AC006210.1-201ENST00000424882 111 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 AL593851.1-201ENST00000426171 157 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 U8.22-201ENST00000459141 133 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 RNU2-11P-201ENST00000459191 187 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 RNU6-437P-201ENST00000459408 95 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 ACA59.1-201ENST00000515966 143 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 RNU7-161P-201ENST00000517289 62 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 AP000942.4-201ENST00000604811 241 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 AC004467.1-201ENST00000615678 330 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 AC005609.4-201ENST00000625071 447 ntBASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.07□□□□□ -2.58
VPS25Q9BRG1 Y_RNA.112-201ENST00000363250 102 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 RNU6-926P-201ENST00000384075 107 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 SNORD110-201ENST00000408189 75 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 U8.19-201ENST00000459095 133 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 RNU7-104P-201ENST00000459398 79 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 AC074198.2-201ENST00000508153 258 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 MIR3681-201ENST00000580089 72 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 AC018638.8-201ENST00000588755 281 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 AL662814.1-201ENST00000617364 121 ntBASIC-1.08□□□□□ -2.58
VPS25Q9BRG1 SNORD115-34-201ENST00000362441 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-12-201ENST00000362583 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-29-201ENST00000362834 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-9-201ENST00000362912 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-21-201ENST00000362963 81 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-14-201ENST00000363090 81 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 Y_RNA.118-201ENST00000363300 101 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-13-201ENST00000363358 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-41-201ENST00000363608 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-11-201ENST00000363616 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-5-201ENST00000363633 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-39-201ENST00000363694 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-4-201ENST00000363810 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-16-201ENST00000363887 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-6-201ENST00000363942 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-42-201ENST00000364273 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-15-201ENST00000364809 81 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-1-201ENST00000364961 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-26-201ENST00000365067 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-10-201ENST00000365073 81 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-43-201ENST00000365503 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 SNORD115-36-201ENST00000365629 82 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 RNU6-192P-201ENST00000391253 100 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 MIR1912-201ENST00000410389 80 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 RNU6-248P-201ENST00000410720 107 ntBASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.09□□□□□ -2.58
VPS25Q9BRG1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-1.09□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms