Protein–RNA interactions for Protein: Q9BR11

ZSWIM1, Zinc finger SWIM domain-containing protein 1, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1Q9BR11 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 SNORA63D-201ENST00000364359 132 ntBASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 MIR539-201ENST00000365690 78 ntBASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 Y_RNA.542-201ENST00000384641 111 ntBASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 SNORA20-201ENST00000384662 132 ntBASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 MIR597-201ENST00000384968 97 ntBASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 SNORD72-201ENST00000390994 80 ntBASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 RNU6-460P-201ENST00000391158 108 ntBASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 RNU2-51P-201ENST00000410708 197 ntBASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 RNU6-62P-201ENST00000516526 102 ntBASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 RNU6-504P-201ENST00000516568 104 ntBASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 MIR548AI-201ENST00000579940 88 ntBASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ZSWIM1Q9BR11 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 RNU6-888P-201ENST00000363010 101 ntBASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 U8.2-201ENST00000363156 134 ntBASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 MIR624-201ENST00000385217 97 ntBASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 SNORA48.1-201ENST00000390879 135 ntBASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 RNA5SP109-201ENST00000391010 116 ntBASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 RNU11-3P-201ENST00000391111 133 ntBASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 snoU13.26-201ENST00000459452 105 ntBASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 AC090142.3-201ENST00000519012 385 ntBASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 AP001328.1-201ENST00000528550 176 ntBASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 U7.2-201ENST00000607576 63 ntBASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 MIR8054-201ENST00000620877 86 ntBASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ZSWIM1Q9BR11 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 Y_RNA.218-201ENST00000364218 104 ntBASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 RNU6-1168P-201ENST00000390831 104 ntBASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 Y_RNA.584-201ENST00000391090 114 ntBASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 RN7SKP192-201ENST00000411291 327 ntBASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 HMGN2P38-201ENST00000423806 265 ntBASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 HMGN2P3-201ENST00000433603 273 ntBASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 HMGN2P5-201ENST00000436882 273 ntBASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 AC011753.1-201ENST00000451001 220 ntBASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 MIR5094-201ENST00000578766 85 ntBASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 AC131055.1-201ENST00000584626 316 ntBASIC2.11□□□□□ -2.07
ZSWIM1Q9BR11 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 RNU6-1336P-201ENST00000383886 109 ntBASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 MIR548A2-201ENST00000384956 97 ntBASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 MIR524-201ENST00000385242 87 ntBASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 SNRPGP14-201ENST00000435400 219 ntBASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 AC008267.6-201ENST00000441664 139 ntBASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 RNU6-971P-201ENST00000516920 106 ntBASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 SUB1P4-201ENST00000566062 339 ntBASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 SNORD14A-201ENST00000606526 91 ntBASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 AC006441.5-201ENST00000612680 209 ntBASIC2.1□□□□□ -2.07
ZSWIM1Q9BR11 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 Y_RNA.120-201ENST00000363304 110 ntBASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 RNU6-915P-201ENST00000364943 103 ntBASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 SNORD50B-201ENST00000364995 70 ntBASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 RNU6-1292P-201ENST00000383856 107 ntBASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 SNORD61-201ENST00000384252 73 ntBASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 RNU6-440P-201ENST00000390882 105 ntBASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 RNA5SP127-201ENST00000411051 133 ntBASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 SNORA31.10-201ENST00000516482 106 ntBASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 MIR4769-201ENST00000584126 77 ntBASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 SNORA28-201ENST00000606769 126 ntBASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 AC245884.12-201ENST00000615364 59 ntBASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.09□□□□□ -2.07
ZSWIM1Q9BR11 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
ZSWIM1Q9BR11 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 AL442644.1-201ENST00000454390 3105 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 SNORD68-201ENST00000363214 84 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 SNORD116-14-201ENST00000383894 92 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 SNORD116-17-201ENST00000383929 92 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 SNORD116-15-201ENST00000384445 92 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 SNORD116-19-201ENST00000384729 92 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 MLLT10P1-201ENST00000418346 262 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 CYCSP49-201ENST00000420810 319 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 SNRPGP13-201ENST00000442212 177 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-313P-201ENST00000516317 112 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 RNVU1-2-201ENST00000516326 135 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 AL365222.1-201ENST00000614661 98 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.08□□□□□ -2.08
ZSWIM1Q9BR11 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 MIRLET7C-201ENST00000362160 84 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 Y_RNA.71-201ENST00000362892 104 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 363.8 ms