Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 MIR1304-201ENST00000408243 91 ntBASIC1.87□□□□□ -2.11
MEIS3Q99687 RNU4-62P-201ENST00000410125 130 ntBASIC1.87□□□□□ -2.11
MEIS3Q99687 AC108667.1-201ENST00000428618 249 ntBASIC1.87□□□□□ -2.11
MEIS3Q99687 RPS27P1-201ENST00000450552 247 ntBASIC1.87□□□□□ -2.11
MEIS3Q99687 AC011753.1-201ENST00000451001 220 ntBASIC1.87□□□□□ -2.11
MEIS3Q99687 SNORD11-201ENST00000459124 84 ntBASIC1.87□□□□□ -2.11
MEIS3Q99687 RNU2-34P-201ENST00000516534 121 ntBASIC1.87□□□□□ -2.11
MEIS3Q99687 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.87□□□□□ -2.11
MEIS3Q99687 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.87□□□□□ -2.11
MEIS3Q99687 SNORD53B-201ENST00000577887 78 ntBASIC1.87□□□□□ -2.11
MEIS3Q99687 AC006435.5-201ENST00000624486 112 ntBASIC1.87□□□□□ -2.11
MEIS3Q99687 MIR338-201ENST00000636369 67 ntBASIC1.87□□□□□ -2.11
MEIS3Q99687 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.87□□□□□ -2.11
MEIS3Q99687 snoU2-30.2-201ENST00000362805 70 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 RNU6-1081P-201ENST00000384537 107 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 MIR517C-201ENST00000385103 95 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 RNU6-1168P-201ENST00000390831 104 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 AL354695.1-201ENST00000427935 228 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 RNU7-107P-201ENST00000459121 61 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 NDUFA4P2-201ENST00000489989 244 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 RNU6-1333P-201ENST00000516162 93 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 Y_RNA.686-201ENST00000516548 134 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 MIR5688-201ENST00000580619 83 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 MIR378D2-201ENST00000580636 98 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 AC011603.4-201ENST00000611325 277 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 AC245884.12-201ENST00000615364 59 ntBASIC1.86□□□□□ -2.11
MEIS3Q99687 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
MEIS3Q99687 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
MEIS3Q99687 RNU6-862P-201ENST00000362804 105 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 RNU1-96P-201ENST00000364163 162 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 Y_RNA.251-201ENST00000364551 99 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 Y_RNA.432-201ENST00000384087 111 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 Y_RNA.486-201ENST00000384398 107 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 RNU6-482P-201ENST00000391068 107 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 SNORA67.6-201ENST00000391093 99 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 RNU4-43P-201ENST00000410628 137 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 MLLT10P1-201ENST00000418346 262 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 RNU6-313P-201ENST00000516317 112 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 RNU6-62P-201ENST00000516526 102 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.85□□□□□ -2.11
MEIS3Q99687 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 uc_338.4-201ENST00000616635 176 ntBASIC1.85□□□□□ -2.11
MEIS3Q99687 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
MEIS3Q99687 RNU6-235P-201ENST00000362644 107 ntBASIC1.84□□□□□ -2.11
MEIS3Q99687 RNU6-978P-201ENST00000364371 103 ntBASIC1.84□□□□□ -2.11
MEIS3Q99687 SNORD72-201ENST00000390994 80 ntBASIC1.84□□□□□ -2.11
MEIS3Q99687 RNA5SP496-201ENST00000391240 109 ntBASIC1.84□□□□□ -2.11
MEIS3Q99687 AC009238.1-201ENST00000442165 424 ntBASIC1.84□□□□□ -2.11
MEIS3Q99687 AC009237.6-201ENST00000446969 424 ntBASIC1.84□□□□□ -2.11
MEIS3Q99687 RNU6-1299P-201ENST00000516316 100 ntBASIC1.84□□□□□ -2.11
MEIS3Q99687 RNU6-479P-201ENST00000516348 105 ntBASIC1.84□□□□□ -2.11
MEIS3Q99687 RNU6-197P-201ENST00000516680 100 ntBASIC1.84□□□□□ -2.11
MEIS3Q99687 RNU7-149P-201ENST00000516739 59 ntBASIC1.84□□□□□ -2.11
MEIS3Q99687 Pinc.1-201ENST00000616452 154 ntBASIC1.84□□□□□ -2.11
MEIS3Q99687 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
MEIS3Q99687 MTND5P32-201ENST00000560711 1802 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 U8.1-201ENST00000362843 134 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 RNA5SP493-201ENST00000364115 91 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 RNU6-1164P-201ENST00000364428 107 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 Y_RNA.253-201ENST00000364562 112 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 Y_RNA.634-201ENST00000364811 113 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 RNU6-915P-201ENST00000364943 103 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 RNY3P5-201ENST00000384127 102 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 MIR562-201ENST00000384894 95 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 RNU2-70P-201ENST00000410718 179 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.83□□□□□ -2.12
MEIS3Q99687 AC099677.2-201ENST00000436385 175 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 AL606517.2-201ENST00000442855 241 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 SNORD77.4-201ENST00000516158 81 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 RNU7-99P-201ENST00000516271 62 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 AC091178.2-201ENST00000584401 117 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 SNORD14A-201ENST00000606526 91 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 AC022513.1-201ENST00000624512 117 ntBASIC1.83□□□□□ -2.12
MEIS3Q99687 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.83□□□□□ -2.12
MEIS3Q99687 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.83□□□□□ -2.12
MEIS3Q99687 SNORA1B-201ENST00000362535 133 ntBASIC1.82□□□□□ -2.12
MEIS3Q99687 SNORA8-201ENST00000384574 139 ntBASIC1.82□□□□□ -2.12
MEIS3Q99687 SNORA75.5-201ENST00000391291 81 ntBASIC1.82□□□□□ -2.12
MEIS3Q99687 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.82□□□□□ -2.12
MEIS3Q99687 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.82□□□□□ -2.12
MEIS3Q99687 AL163195.1-201ENST00000496941 348 ntBASIC1.82□□□□□ -2.12
MEIS3Q99687 MRPS17P9-201ENST00000511924 393 ntBASIC1.82□□□□□ -2.12
MEIS3Q99687 SNORA31.24-201ENST00000517232 57 ntBASIC1.82□□□□□ -2.12
MEIS3Q99687 AP001328.1-201ENST00000528550 176 ntBASIC1.82□□□□□ -2.12
MEIS3Q99687 AC007229.1-201ENST00000590455 412 ntBASIC1.82□□□□□ -2.12
MEIS3Q99687 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.82□□□□□ -2.12
MEIS3Q99687 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.82□□□□□ -2.12
MEIS3Q99687 MIR6079-201ENST00000635807 62 ntBASIC1.82□□□□□ -2.12
MEIS3Q99687 MIR203B-201ENST00000636080 86 ntBASIC1.82□□□□□ -2.12
MEIS3Q99687 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
MEIS3Q99687 Y_RNA.127-201ENST00000363386 109 ntBASIC1.81□□□□□ -2.12
MEIS3Q99687 SNORA3A-201ENST00000364113 130 ntBASIC1.81□□□□□ -2.12
MEIS3Q99687 RNU1-148P-201ENST00000384472 162 ntBASIC1.81□□□□□ -2.12
MEIS3Q99687 SNORD20-201ENST00000384550 80 ntBASIC1.81□□□□□ -2.12
MEIS3Q99687 RNA5SP323-201ENST00000391094 133 ntBASIC1.81□□□□□ -2.12
MEIS3Q99687 SNORA79-201ENST00000408376 140 ntBASIC1.81□□□□□ -2.12
MEIS3Q99687 SRIP3-201ENST00000413200 219 ntBASIC1.81□□□□□ -2.12
MEIS3Q99687 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
MEIS3Q99687 SNRPGP10-201ENST00000432323 225 ntBASIC1.81□□□□□ -2.12
MEIS3Q99687 ATP5J2P3-201ENST00000451550 258 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms