Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 Y_RNA.621-201ENST00000411065 96 ntBASIC2.12□□□□□ -2.07
HAPLN3Q96S86 RNU7-94P-201ENST00000459576 63 ntBASIC2.12□□□□□ -2.07
HAPLN3Q96S86 RPS27P21-201ENST00000486977 252 ntBASIC2.12□□□□□ -2.07
HAPLN3Q96S86 RNU7-149P-201ENST00000516739 59 ntBASIC2.12□□□□□ -2.07
HAPLN3Q96S86 AL160236.1-201ENST00000556317 195 ntBASIC2.12□□□□□ -2.07
HAPLN3Q96S86 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HAPLN3Q96S86 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
HAPLN3Q96S86 RNU6-1019P-201ENST00000364424 107 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 Y_RNA.267-201ENST00000364679 109 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 Y_RNA.634-201ENST00000364811 113 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 RNU6-22P-201ENST00000384355 107 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 SNORA40-201ENST00000388090 126 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 SNORA48.1-201ENST00000390879 135 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 AL606517.2-201ENST00000442855 241 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 HMGN1P7-201ENST00000491722 313 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 RNU6-548P-201ENST00000517083 115 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 AC078899.2-201ENST00000595282 212 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 AC069114.2-201ENST00000604699 304 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 AL365222.1-201ENST00000614661 98 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 U1.36-201ENST00000620684 176 ntBASIC2.11□□□□□ -2.07
HAPLN3Q96S86 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
HAPLN3Q96S86 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
HAPLN3Q96S86 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HAPLN3Q96S86 SNORA1B-201ENST00000362535 133 ntBASIC2.1□□□□□ -2.07
HAPLN3Q96S86 RNU6-1138P-201ENST00000365359 106 ntBASIC2.1□□□□□ -2.07
HAPLN3Q96S86 SNORA12.1-201ENST00000390873 148 ntBASIC2.1□□□□□ -2.07
HAPLN3Q96S86 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
HAPLN3Q96S86 AC069257.2-201ENST00000441819 155 ntBASIC2.1□□□□□ -2.07
HAPLN3Q96S86 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
HAPLN3Q96S86 RNA5SP153-201ENST00000516498 76 ntBASIC2.1□□□□□ -2.07
HAPLN3Q96S86 RNU6-971P-201ENST00000516920 106 ntBASIC2.1□□□□□ -2.07
HAPLN3Q96S86 AC097639.2-201ENST00000603159 172 ntBASIC2.1□□□□□ -2.07
HAPLN3Q96S86 AC022217.4-201ENST00000604389 163 ntBASIC2.1□□□□□ -2.07
HAPLN3Q96S86 Pinc.1-201ENST00000616452 154 ntBASIC2.1□□□□□ -2.07
HAPLN3Q96S86 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HAPLN3Q96S86 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
HAPLN3Q96S86 Y_RNA.218-201ENST00000364218 104 ntBASIC2.09□□□□□ -2.07
HAPLN3Q96S86 SNORA75.5-201ENST00000391291 81 ntBASIC2.09□□□□□ -2.07
HAPLN3Q96S86 SNORA79-201ENST00000408376 140 ntBASIC2.09□□□□□ -2.07
HAPLN3Q96S86 RNA5SP450-201ENST00000411206 102 ntBASIC2.09□□□□□ -2.07
HAPLN3Q96S86 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.09□□□□□ -2.07
HAPLN3Q96S86 OR9P1P-201ENST00000496431 281 ntBASIC2.09□□□□□ -2.07
HAPLN3Q96S86 RNU1-40P-201ENST00000516816 164 ntBASIC2.09□□□□□ -2.07
HAPLN3Q96S86 RNU1-97P-201ENST00000516872 164 ntBASIC2.09□□□□□ -2.07
HAPLN3Q96S86 AL358944.1-201ENST00000528537 144 ntBASIC2.09□□□□□ -2.07
HAPLN3Q96S86 MIR5094-201ENST00000578766 85 ntBASIC2.09□□□□□ -2.07
HAPLN3Q96S86 JPX_2.1-201ENST00000614161 69 ntBASIC2.09□□□□□ -2.07
HAPLN3Q96S86 AL591926.4-201ENST00000616895 298 ntBASIC2.09□□□□□ -2.07
HAPLN3Q96S86 AL353997.5-201ENST00000618886 171 ntBASIC2.09□□□□□ -2.07
HAPLN3Q96S86 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.08□□□□□ -2.08
HAPLN3Q96S86 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HAPLN3Q96S86 Y_RNA.66-201ENST00000362862 102 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 SNORD72-201ENST00000390994 80 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 SNORD23.1-201ENST00000408212 104 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 RNU2-70P-201ENST00000410718 179 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 RNA5SP501-201ENST00000410990 112 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HAPLN3Q96S86 SNRPGP10-201ENST00000432323 225 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 MRPS17P9-201ENST00000511924 393 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 RNA5SP364-201ENST00000516938 78 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 RNU2-19P-201ENST00000517288 84 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 AC084364.2-201ENST00000546924 395 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.08□□□□□ -2.08
HAPLN3Q96S86 AC012493.3-201ENST00000604494 112 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 Y_RNA.783-201ENST00000613546 102 ntBASIC2.08□□□□□ -2.08
HAPLN3Q96S86 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
HAPLN3Q96S86 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
HAPLN3Q96S86 SNORA22C-201ENST00000384614 134 ntBASIC2.07□□□□□ -2.08
HAPLN3Q96S86 AC019129.1-201ENST00000403786 261 ntBASIC2.07□□□□□ -2.08
HAPLN3Q96S86 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.07□□□□□ -2.08
HAPLN3Q96S86 AC023449.1-201ENST00000454464 154 ntBASIC2.07□□□□□ -2.08
HAPLN3Q96S86 AL049830.1-201ENST00000468034 425 ntBASIC2.07□□□□□ -2.08
HAPLN3Q96S86 RNVU1-2-201ENST00000516326 135 ntBASIC2.07□□□□□ -2.08
HAPLN3Q96S86 SUB1P4-201ENST00000566062 339 ntBASIC2.07□□□□□ -2.08
HAPLN3Q96S86 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HAPLN3Q96S86 MIR126-201ENST00000362291 85 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 Y_RNA.261-201ENST00000364631 102 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 MIR522-201ENST00000385071 87 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 RNU6-1168P-201ENST00000390831 104 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 RNA5SP109-201ENST00000391010 116 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 RNU2-51P-201ENST00000410708 197 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 AC245047.4-201ENST00000433189 144 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 RNU6-1211P-201ENST00000459179 105 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 AC055731.1-201ENST00000474387 401 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 RNU6-479P-201ENST00000516348 105 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 RNU6-1234P-201ENST00000516877 103 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 MIR548AI-201ENST00000579940 88 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 MIR5089-201ENST00000580047 84 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 AC008507.4-201ENST00000585464 127 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 AP001340.1-201ENST00000624405 217 ntBASIC2.06□□□□□ -2.08
HAPLN3Q96S86 Y_RNA.71-201ENST00000362892 104 ntBASIC2.05□□□□□ -2.08
HAPLN3Q96S86 RNU6-1081P-201ENST00000384537 107 ntBASIC2.05□□□□□ -2.08
HAPLN3Q96S86 MIR764-201ENST00000390811 85 ntBASIC2.05□□□□□ -2.08
HAPLN3Q96S86 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.05□□□□□ -2.08
HAPLN3Q96S86 MLLT10P1-201ENST00000418346 262 ntBASIC2.05□□□□□ -2.08
HAPLN3Q96S86 FTH1P12-201ENST00000432137 551 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 143.7 ms