Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 SNORD115-10-201ENST00000365073 81 ntBASIC-1.96□□□□□ -2.72
CFAP54Q96N23 RNU6-701P-201ENST00000384059 107 ntBASIC-1.96□□□□□ -2.72
CFAP54Q96N23 MIR525-201ENST00000384978 85 ntBASIC-1.96□□□□□ -2.72
CFAP54Q96N23 AL603914.1-201ENST00000401964 204 ntBASIC-1.96□□□□□ -2.72
CFAP54Q96N23 MTATP6P13-201ENST00000438531 667 ntBASIC-1.96□□□□□ -2.72
CFAP54Q96N23 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.96□□□□□ -2.72
CFAP54Q96N23 AC013437.2-201ENST00000639587 677 ntBASIC-1.96□□□□□ -2.72
CFAP54Q96N23 Y_RNA.588-201ENST00000391254 102 ntBASIC-1.96□□□□□ -2.72
CFAP54Q96N23 RNU4-80P-201ENST00000363200 141 ntBASIC-1.97□□□□□ -2.72
CFAP54Q96N23 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.97□□□□□ -2.72
CFAP54Q96N23 RNU6-865P-201ENST00000364772 107 ntBASIC-1.97□□□□□ -2.72
CFAP54Q96N23 RNU6-437P-201ENST00000459408 95 ntBASIC-1.97□□□□□ -2.72
CFAP54Q96N23 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-1.97□□□□□ -2.72
CFAP54Q96N23 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.97□□□□□ -2.72
CFAP54Q96N23 AC116353.2-201ENST00000505332 712 ntBASIC-1.97□□□□□ -2.72
CFAP54Q96N23 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.97□□□□□ -2.73
CFAP54Q96N23 RNA5SP245-201ENST00000364239 121 ntBASIC-1.97□□□□□ -2.73
CFAP54Q96N23 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.97□□□□□ -2.73
CFAP54Q96N23 SNRPGP14-201ENST00000435400 219 ntBASIC-1.97□□□□□ -2.73
CFAP54Q96N23 Z98949.2-201ENST00000440996 144 ntBASIC-1.97□□□□□ -2.73
CFAP54Q96N23 AL353691.2-201ENST00000443795 59 ntBASIC-1.97□□□□□ -2.73
CFAP54Q96N23 SEPT14P24-201ENST00000447236 180 ntBASIC-1.97□□□□□ -2.73
CFAP54Q96N23 SNRPGP8-201ENST00000454064 226 ntBASIC-1.97□□□□□ -2.73
CFAP54Q96N23 SEPT14P4-201ENST00000513445 186 ntBASIC-1.97□□□□□ -2.73
CFAP54Q96N23 MTND5P40-201ENST00000559945 246 ntBASIC-1.97□□□□□ -2.73
CFAP54Q96N23 BNIP3P9-201ENST00000603714 553 ntBASIC-1.97□□□□□ -2.73
CFAP54Q96N23 RNU6-395P-201ENST00000365662 106 ntBASIC-1.98□□□□□ -2.73
CFAP54Q96N23 RNU6-245P-201ENST00000384020 107 ntBASIC-1.98□□□□□ -2.73
CFAP54Q96N23 MIR652-201ENST00000385278 98 ntBASIC-1.98□□□□□ -2.73
CFAP54Q96N23 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.98□□□□□ -2.73
CFAP54Q96N23 MTND3P13-201ENST00000574391 343 ntBASIC-1.98□□□□□ -2.73
CFAP54Q96N23 RNU6-252P-201ENST00000363232 107 ntBASIC-1.98□□□□□ -2.73
CFAP54Q96N23 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.98□□□□□ -2.73
CFAP54Q96N23 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.98□□□□□ -2.73
CFAP54Q96N23 LARP7P2-201ENST00000575306 125 ntBASIC-1.98□□□□□ -2.73
CFAP54Q96N23 AC080013.3-201ENST00000606839 578 ntBASIC-1.98□□□□□ -2.73
CFAP54Q96N23 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.98□□□□□ -2.73
CFAP54Q96N23 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.98□□□□□ -2.73
CFAP54Q96N23 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 RPL30P16-201ENST00000419341 429 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 RNU6-221P-201ENST00000459541 99 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 AC108081.1-201ENST00000604358 221 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 FTX_4.1-201ENST00000616291 147 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 RNU6-258P-201ENST00000390884 101 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 RNU7-182P-201ENST00000459009 62 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 RNU6-168P-201ENST00000516189 101 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-1.99□□□□□ -2.73
CFAP54Q96N23 Y_RNA.33-201ENST00000362591 102 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 RNU6-552P-201ENST00000362869 119 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 RNU6-291P-201ENST00000384720 107 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.99□□□□□ -2.73
CFAP54Q96N23 AC244670.1-201ENST00000436879 112 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.99□□□□□ -2.73
CFAP54Q96N23 AC091178.2-201ENST00000584401 117 ntBASIC-1.99□□□□□ -2.73
CFAP54Q96N23 MIR626-201ENST00000385032 94 ntBASIC-2□□□□□ -2.73
CFAP54Q96N23 MIR586-201ENST00000385035 97 ntBASIC-2□□□□□ -2.73
CFAP54Q96N23 RNU6-415P-201ENST00000516252 97 ntBASIC-2□□□□□ -2.73
CFAP54Q96N23 MIR4791-201ENST00000607666 84 ntBASIC-2□□□□□ -2.73
CFAP54Q96N23 Y_RNA.781-201ENST00000620301 103 ntBASIC-2□□□□□ -2.73
CFAP54Q96N23 SNORA18-201ENST00000384416 132 ntBASIC-2□□□□□ -2.73
CFAP54Q96N23 RNU6-1179P-201ENST00000384667 107 ntBASIC-2□□□□□ -2.73
CFAP54Q96N23 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-2.01□□□□□ -2.73
CFAP54Q96N23 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-2.01□□□□□ -2.73
CFAP54Q96N23 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-2.01□□□□□ -2.73
CFAP54Q96N23 OSBPL9P5-201ENST00000542581 171 ntBASIC-2.01□□□□□ -2.73
CFAP54Q96N23 MIR4490-201ENST00000582647 84 ntBASIC-2.01□□□□□ -2.73
CFAP54Q96N23 AC011374.2-201ENST00000607135 526 ntBASIC-2.01□□□□□ -2.73
CFAP54Q96N23 Y_RNA.222-201ENST00000364264 102 ntBASIC-2.01□□□□□ -2.73
CFAP54Q96N23 AL139421.1-201ENST00000423010 169 ntBASIC-2.01□□□□□ -2.73
CFAP54Q96N23 AC236972.2-201ENST00000434979 310 ntBASIC-2.01□□□□□ -2.73
CFAP54Q96N23 AC026414.1-201ENST00000504046 698 ntBASIC-2.01□□□□□ -2.73
CFAP54Q96N23 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-2.01□□□□□ -2.73
CFAP54Q96N23 RNU5B-6P-201ENST00000516765 68 ntBASIC-2.01□□□□□ -2.73
CFAP54Q96N23 AL359634.1-202ENST00000404721 284 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 RNU4-55P-201ENST00000410731 137 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 Y_RNA.687-201ENST00000516558 91 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 RNU6-1066P-201ENST00000363573 105 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 Y_RNA.534-201ENST00000384599 112 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 MIR599-201ENST00000385069 95 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 RNU2-29P-201ENST00000410423 189 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 RNU2-28P-201ENST00000410457 189 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 MTATP6P18-201ENST00000417994 673 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 HMGN2P32-201ENST00000444648 269 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 SNORD123-201ENST00000459473 70 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 RNU6-914P-201ENST00000516749 109 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 AC090616.2-202ENST00000584248 222 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 AC026585.1-201ENST00000619582 524 ntBASIC-2.02□□□□□ -2.73
CFAP54Q96N23 SNORA1.2-201ENST00000365189 134 ntBASIC-2.03□□□□□ -2.73
CFAP54Q96N23 SNORA62.4-201ENST00000365504 151 ntBASIC-2.03□□□□□ -2.73
CFAP54Q96N23 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.03□□□□□ -2.73
CFAP54Q96N23 SNORD12C-201ENST00000386307 89 ntBASIC-2.03□□□□□ -2.73
CFAP54Q96N23 AC055872.1-201ENST00000570978 278 ntBASIC-2.03□□□□□ -2.73
CFAP54Q96N23 RNU6-79P-201ENST00000362511 107 ntBASIC-2.03□□□□□ -2.73
CFAP54Q96N23 U3.4-201ENST00000363352 213 ntBASIC-2.03□□□□□ -2.73
CFAP54Q96N23 Y_RNA.519-201ENST00000384553 102 ntBASIC-2.03□□□□□ -2.73
CFAP54Q96N23 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.03□□□□□ -2.73
CFAP54Q96N23 AL450270.1-201ENST00000606160 391 ntBASIC-2.03□□□□□ -2.73
CFAP54Q96N23 AC096586.1-201ENST00000610267 561 ntBASIC-2.03□□□□□ -2.73
CFAP54Q96N23 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-2.03□□□□□ -2.73
CFAP54Q96N23 AL035461.1-201ENST00000421490 332 ntBASIC-2.04□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms