Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-53P-201ENST00000365367 106 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 SNORA63.7-201ENST00000365579 123 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 Y_RNA.483-201ENST00000384380 101 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 Y_RNA.494-201ENST00000384432 111 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 Y_RNA.526-201ENST00000384572 110 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 AL451046.2-201ENST00000403074 277 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 MIR1185-1-201ENST00000408598 86 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 BTF3P11-201ENST00000426582 477 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 RNU6-437P-201ENST00000459408 95 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 Y_RNA.641-201ENST00000459414 105 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 SNORD124-201ENST00000459577 104 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 COX6CP14-201ENST00000469580 174 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 SNORD111.1-201ENST00000516421 86 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 AP003716.2-201ENST00000528260 108 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 AL355297.3-201ENST00000604082 446 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 snoU18.1-201ENST00000629629 71 ntBASIC0.72□□□□□ -2.29
LINC00477Q96M19 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
LINC00477Q96M19 RNU4-90P-201ENST00000362773 141 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 Y_RNA.376-201ENST00000365638 108 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 RNU6-472P-201ENST00000384299 107 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 RNU6-482P-201ENST00000391068 107 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 RNU6-131P-201ENST00000391144 107 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 MIR548F4-201ENST00000408515 105 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 RNU6-710P-201ENST00000410424 105 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 RNU6-1203P-201ENST00000410703 110 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 RNU6-1054P-201ENST00000411293 104 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 AC005534.2-201ENST00000431047 433 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 DEFB108E-201ENST00000524692 240 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.71□□□□□ -2.3
LINC00477Q96M19 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.71□□□□□ -2.3
LINC00477Q96M19 MIR4643-201ENST00000577473 78 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 MIR548AR-201ENST00000582191 57 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 PRELID3BP2-201ENST00000605362 201 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 AL020996.3-201ENST00000606617 222 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 AL021707.8-201ENST00000609428 183 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 AL391903.3-201ENST00000612158 163 ntBASIC0.71□□□□□ -2.3
LINC00477Q96M19 HSBP1P2-201ENST00000299671 229 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 RNU6-1084P-201ENST00000362498 107 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 Y_RNA.202-201ENST00000364083 110 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 RNU6-268P-201ENST00000364174 107 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 Y_RNA.237-201ENST00000364439 102 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 Y_RNA.327-201ENST00000365201 102 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 Y_RNA.380-201ENST00000365663 111 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 MIR562-201ENST00000384894 95 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 RNU6-1109P-201ENST00000391187 107 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 AC002429.1-201ENST00000437672 148 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 SNORD123-201ENST00000459473 70 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.7□□□□□ -2.3
LINC00477Q96M19 SNORD79.1-201ENST00000516069 84 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 RN7SKP164-201ENST00000516138 266 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 RNA5SP458-201ENST00000516188 119 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 RNU6-1338P-201ENST00000516328 91 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 SNORA40.15-201ENST00000516884 107 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 RNU7-181P-201ENST00000517234 74 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 AC007751.1-201ENST00000529260 376 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 MIR3124-201ENST00000582636 67 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 MIR4769-201ENST00000584126 77 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 AC008507.4-201ENST00000585464 127 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 AC211469.2-201ENST00000605461 205 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 AC013791.1-201ENST00000616619 62 ntBASIC0.7□□□□□ -2.3
LINC00477Q96M19 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.7□□□□□ -2.3
LINC00477Q96M19 RNU6-238P-201ENST00000363313 106 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 RNU6-654P-201ENST00000364373 107 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 Y_RNA.276-201ENST00000364732 109 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 Y_RNA.396-201ENST00000383949 103 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 RNU6-1105P-201ENST00000384774 107 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 MIR19B1-201ENST00000384829 87 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 RNA5SP95-201ENST00000410319 137 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 RNU2-64P-201ENST00000411315 191 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 AC005840.1-201ENST00000498412 377 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 RNU2-31P-201ENST00000516954 155 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 SNORA74.3-201ENST00000517108 154 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 MIR4698-201ENST00000577795 80 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 MIR4764-201ENST00000580680 88 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 AL049861.1-201ENST00000603130 150 ntBASIC0.69□□□□□ -2.3
LINC00477Q96M19 RNU6-674P-201ENST00000363831 107 ntBASIC0.68□□□□□ -2.3
LINC00477Q96M19 snoU2-30.1-201ENST00000365012 70 ntBASIC0.68□□□□□ -2.3
LINC00477Q96M19 RNU6-1335P-201ENST00000365426 107 ntBASIC0.68□□□□□ -2.3
LINC00477Q96M19 MIR568-201ENST00000385036 95 ntBASIC0.68□□□□□ -2.3
LINC00477Q96M19 MT-TT-201ENST00000387460 66 ntBASIC0.68□□□□□ -2.3
LINC00477Q96M19 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.68□□□□□ -2.3
LINC00477Q96M19 AL731563.1-201ENST00000442202 214 ntBASIC0.68□□□□□ -2.3
LINC00477Q96M19 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.68□□□□□ -2.3
LINC00477Q96M19 RNU4-57P-201ENST00000515980 135 ntBASIC0.68□□□□□ -2.3
LINC00477Q96M19 RNU7-25P-201ENST00000516544 62 ntBASIC0.68□□□□□ -2.3
LINC00477Q96M19 RNU6-635P-201ENST00000516651 102 ntBASIC0.68□□□□□ -2.3
LINC00477Q96M19 RNU7-116P-201ENST00000516940 62 ntBASIC0.68□□□□□ -2.3
LINC00477Q96M19 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
LINC00477Q96M19 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
LINC00477Q96M19 RNU6-740P-201ENST00000364734 105 ntBASIC0.67□□□□□ -2.3
LINC00477Q96M19 RNU6-639P-201ENST00000384074 107 ntBASIC0.67□□□□□ -2.3
LINC00477Q96M19 MIR606-201ENST00000384851 96 ntBASIC0.67□□□□□ -2.3
LINC00477Q96M19 MIR452-201ENST00000385020 85 ntBASIC0.67□□□□□ -2.3
LINC00477Q96M19 MIR146A-201ENST00000385201 99 ntBASIC0.67□□□□□ -2.3
LINC00477Q96M19 AC090844.1-201ENST00000422019 156 ntBASIC0.67□□□□□ -2.3
LINC00477Q96M19 RNU7-21P-201ENST00000459430 62 ntBASIC0.67□□□□□ -2.3
LINC00477Q96M19 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.67□□□□□ -2.3
LINC00477Q96M19 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.67□□□□□ -2.3
LINC00477Q96M19 SERF1AP1-201ENST00000514575 187 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms