Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 Y_RNA.98-201ENST00000363109 102 ntBASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 RNA5SP42-201ENST00000364278 115 ntBASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 RNA5SP138-201ENST00000365098 114 ntBASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 Y_RNA.537-201ENST00000384626 109 ntBASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
MS4A4AQ96JQ5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
MS4A4AQ96JQ5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.93□□□□□ -1.78
MS4A4AQ96JQ5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
MS4A4AQ96JQ5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
MS4A4AQ96JQ5 MIR513A2-201ENST00000385249 127 ntBASIC3.93□□□□□ -1.78
MS4A4AQ96JQ5 RNU6-220P-201ENST00000390919 107 ntBASIC3.93□□□□□ -1.78
MS4A4AQ96JQ5 RNA5SP306-201ENST00000411087 107 ntBASIC3.93□□□□□ -1.78
MS4A4AQ96JQ5 U4atac.1-201ENST00000618345 95 ntBASIC3.93□□□□□ -1.78
MS4A4AQ96JQ5 AC012676.2-201ENST00000619258 186 ntBASIC3.93□□□□□ -1.78
MS4A4AQ96JQ5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
MS4A4AQ96JQ5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.93□□□□□ -1.78
MS4A4AQ96JQ5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
MS4A4AQ96JQ5 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
MS4A4AQ96JQ5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MS4A4AQ96JQ5 RNU6-342P-201ENST00000384521 104 ntBASIC3.92□□□□□ -1.78
MS4A4AQ96JQ5 MIR181B2-201ENST00000385004 89 ntBASIC3.92□□□□□ -1.78
MS4A4AQ96JQ5 RNU6-1307P-201ENST00000391012 103 ntBASIC3.92□□□□□ -1.78
MS4A4AQ96JQ5 CST9LP2-201ENST00000437612 320 ntBASIC3.92□□□□□ -1.78
MS4A4AQ96JQ5 RPS29P31-201ENST00000446147 164 ntBASIC3.92□□□□□ -1.78
MS4A4AQ96JQ5 AC090255.1-201ENST00000495779 349 ntBASIC3.92□□□□□ -1.78
MS4A4AQ96JQ5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.92□□□□□ -1.78
MS4A4AQ96JQ5 AC026271.5-201ENST00000577873 130 ntBASIC3.92□□□□□ -1.78
MS4A4AQ96JQ5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.92□□□□□ -1.78
MS4A4AQ96JQ5 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 RNU6-1086P-201ENST00000410930 100 ntBASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 RNU7-48P-201ENST00000458875 63 ntBASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 SNORA25.13-201ENST00000516395 103 ntBASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 SNORD67.1-201ENST00000516618 108 ntBASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 FAM106DP-201ENST00000586416 501 ntBASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 AL449363.1-201ENST00000617815 186 ntBASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MS4A4AQ96JQ5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
MS4A4AQ96JQ5 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
MS4A4AQ96JQ5 SNORA40.18-201ENST00000391200 128 ntBASIC3.9□□□□□ -1.79
MS4A4AQ96JQ5 AC006483.1-201ENST00000487308 313 ntBASIC3.9□□□□□ -1.79
MS4A4AQ96JQ5 AC006023.1-201ENST00000603944 259 ntBASIC3.9□□□□□ -1.79
MS4A4AQ96JQ5 RNVU1-4-201ENST00000612985 164 ntBASIC3.9□□□□□ -1.79
MS4A4AQ96JQ5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MS4A4AQ96JQ5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 RNU6-301P-201ENST00000384277 107 ntBASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 SNORD123-201ENST00000459473 70 ntBASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 RPS29P12-201ENST00000460178 152 ntBASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 RNU7-79P-201ENST00000516082 62 ntBASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 RNU6-539P-201ENST00000516665 103 ntBASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 MIR548AR-201ENST00000582191 57 ntBASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 RPL12P50-201ENST00000603116 116 ntBASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 MIR7106-201ENST00000612419 65 ntBASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 AP001362.1-201ENST00000625165 124 ntBASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
MS4A4AQ96JQ5 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
MS4A4AQ96JQ5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
MS4A4AQ96JQ5 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
MS4A4AQ96JQ5 RNA5SP126-201ENST00000365092 109 ntBASIC3.88□□□□□ -1.79
MS4A4AQ96JQ5 RNU6-1321P-201ENST00000390905 107 ntBASIC3.88□□□□□ -1.79
MS4A4AQ96JQ5 RNU6-871P-201ENST00000516122 100 ntBASIC3.88□□□□□ -1.79
MS4A4AQ96JQ5 MAPK10-253ENST00000641010 4072 ntBASIC3.88□□□□□ -1.79
MS4A4AQ96JQ5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
MS4A4AQ96JQ5 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
MS4A4AQ96JQ5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
MS4A4AQ96JQ5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
MS4A4AQ96JQ5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.87□□□□□ -1.79
MS4A4AQ96JQ5 MIR29C-201ENST00000385231 88 ntBASIC3.87□□□□□ -1.79
MS4A4AQ96JQ5 HSPE1P9-201ENST00000440046 311 ntBASIC3.87□□□□□ -1.79
MS4A4AQ96JQ5 AC026333.2-201ENST00000542164 106 ntBASIC3.87□□□□□ -1.79
MS4A4AQ96JQ5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MS4A4AQ96JQ5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MS4A4AQ96JQ5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
MS4A4AQ96JQ5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.87□□□□□ -1.79
MS4A4AQ96JQ5 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
MS4A4AQ96JQ5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
MS4A4AQ96JQ5 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
MS4A4AQ96JQ5 RNU1-18P-201ENST00000363062 164 ntBASIC3.86□□□□□ -1.79
MS4A4AQ96JQ5 SNORA5B-201ENST00000363786 132 ntBASIC3.86□□□□□ -1.79
MS4A4AQ96JQ5 SNORD6-201ENST00000365444 73 ntBASIC3.86□□□□□ -1.79
MS4A4AQ96JQ5 MIR591-201ENST00000385290 95 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms