Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CHAMP1Q96JM3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CHAMP1Q96JM3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.53□□□□□ -2
CHAMP1Q96JM3 RNU6-1234P-201ENST00000516877 103 ntBASIC2.53□□□□□ -2
CHAMP1Q96JM3 AC084364.2-201ENST00000546924 395 ntBASIC2.53□□□□□ -2
CHAMP1Q96JM3 SNRPGP19-201ENST00000603826 189 ntBASIC2.53□□□□□ -2
CHAMP1Q96JM3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.53□□□□□ -2
CHAMP1Q96JM3 TUG1_4.1-201ENST00000619464 181 ntBASIC2.53□□□□□ -2
CHAMP1Q96JM3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CHAMP1Q96JM3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CHAMP1Q96JM3 Y_RNA.116-201ENST00000363292 103 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 Y_RNA.261-201ENST00000364631 102 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 SNORA25.9-201ENST00000365087 128 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 MIR597-201ENST00000384968 97 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 RNU6-1154P-201ENST00000391001 104 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 RNA5SP109-201ENST00000391010 116 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 RNU6-1211P-201ENST00000459179 105 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 RNU6-313P-201ENST00000516317 112 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 RNU6-365P-201ENST00000517113 106 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 RNU2-60P-201ENST00000517290 128 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 AP001328.1-201ENST00000528550 176 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 AL365205.2-201ENST00000594586 68 ntBASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CHAMP1Q96JM3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 Y_RNA.127-201ENST00000363386 109 ntBASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 U8.5-201ENST00000364528 136 ntBASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 RNU6-915P-201ENST00000364943 103 ntBASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 SNORD50B-201ENST00000364995 70 ntBASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 MIR539-201ENST00000365690 78 ntBASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 SNORA1-201ENST00000384107 130 ntBASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 SNORD61-201ENST00000384252 73 ntBASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 MIR548A2-201ENST00000384956 97 ntBASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 Y_RNA.584-201ENST00000391090 114 ntBASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 RNU2-56P-201ENST00000516826 190 ntBASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 AC087685.1-201ENST00000587507 141 ntBASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHAMP1Q96JM3 RNU6-1290P-201ENST00000362957 109 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 SNORA38-201ENST00000363946 132 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 RNA5SP205-201ENST00000364653 136 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 SNORD116-14-201ENST00000383894 92 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 SNORD116-17-201ENST00000383929 92 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 SNORD116-15-201ENST00000384445 92 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 SNORD116-19-201ENST00000384729 92 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 MIR518A2-201ENST00000384966 87 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 HMGN2P39-201ENST00000398005 273 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 SNORA11.4-201ENST00000408823 129 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 MLLT10P1-201ENST00000418346 262 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 AC245047.3-201ENST00000429428 127 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 AC008267.6-201ENST00000441664 139 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 Y_RNA.666-201ENST00000516187 112 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 SNORA31.10-201ENST00000516482 106 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 Y_RNA.686-201ENST00000516548 134 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 AC090142.3-201ENST00000519012 385 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 AC131055.1-201ENST00000584626 316 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 U7.2-201ENST00000607576 63 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 AC009831.4-201ENST00000620744 325 ntBASIC2.5□□□□□ -2.01
CHAMP1Q96JM3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 MIRLET7G-201ENST00000362280 84 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 U8.1-201ENST00000362843 134 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 RNU6-888P-201ENST00000363010 101 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 RNU6-80P-201ENST00000384195 107 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 MIR624-201ENST00000385217 97 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 RNU11-3P-201ENST00000391111 133 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 AL023284.1-201ENST00000403956 276 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 SNRPGP14-201ENST00000435400 219 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 AL021397.1-201ENST00000451806 248 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 RNU6-504P-201ENST00000516568 104 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 MIR5094-201ENST00000578766 85 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 MIR5194-201ENST00000582634 120 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 MIR8054-201ENST00000620877 86 ntBASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHAMP1Q96JM3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.48□□□□□ -2.01
CHAMP1Q96JM3 Y_RNA.120-201ENST00000363304 110 ntBASIC2.48□□□□□ -2.01
CHAMP1Q96JM3 Y_RNA.280-201ENST00000364765 112 ntBASIC2.48□□□□□ -2.01
CHAMP1Q96JM3 RNA5SP138-201ENST00000365098 114 ntBASIC2.48□□□□□ -2.01
CHAMP1Q96JM3 SNORD24-201ENST00000383884 75 ntBASIC2.48□□□□□ -2.01
CHAMP1Q96JM3 RNU6-735P-201ENST00000410612 107 ntBASIC2.48□□□□□ -2.01
CHAMP1Q96JM3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.48□□□□□ -2.01
CHAMP1Q96JM3 RNA5SP82-201ENST00000516707 92 ntBASIC2.48□□□□□ -2.01
CHAMP1Q96JM3 AC069114.2-201ENST00000604699 304 ntBASIC2.48□□□□□ -2.01
CHAMP1Q96JM3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.48□□□□□ -2.01
CHAMP1Q96JM3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.48□□□□□ -2.01
CHAMP1Q96JM3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CHAMP1Q96JM3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.47□□□□□ -2.01
CHAMP1Q96JM3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CHAMP1Q96JM3 SNORD68-201ENST00000363214 84 ntBASIC2.47□□□□□ -2.01
CHAMP1Q96JM3 SNORA63D-201ENST00000364359 132 ntBASIC2.47□□□□□ -2.01
CHAMP1Q96JM3 Y_RNA.294-201ENST00000364916 102 ntBASIC2.47□□□□□ -2.01
CHAMP1Q96JM3 RNU6-440P-201ENST00000390882 105 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 262.5 ms