Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 AC008267.6-201ENST00000441664 139 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 RNU1-131P-201ENST00000458943 161 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 AC108729.3-201ENST00000513484 108 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 RNU6-1234P-201ENST00000516877 103 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 AC011604.1-201ENST00000545978 196 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 MIR4287-201ENST00000579398 78 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 MIR378D2-201ENST00000580636 98 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 AL021707.8-201ENST00000609428 183 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 AC011603.4-201ENST00000611325 277 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 MIR6845-201ENST00000613182 61 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 U6.73-201ENST00000619194 103 ntBASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.03□□□□□ -2.08
VCPIP1Q96JH7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
VCPIP1Q96JH7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 Y_RNA.71-201ENST00000362892 104 ntBASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 RNY1P11-201ENST00000363759 113 ntBASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 Y_RNA.218-201ENST00000364218 104 ntBASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 RNU6-1082P-201ENST00000364574 107 ntBASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 Y_RNA.432-201ENST00000384087 111 ntBASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 Y_RNA.621-201ENST00000411065 96 ntBASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 AC023449.1-201ENST00000454464 154 ntBASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 RNU6-1041P-201ENST00000516254 102 ntBASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 RNU6-1299P-201ENST00000516316 100 ntBASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 RNU2-56P-201ENST00000516826 190 ntBASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 MIR2681-201ENST00000581814 105 ntBASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 TUG1_4.1-201ENST00000619464 181 ntBASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VCPIP1Q96JH7 RNU6-1209P-201ENST00000363655 107 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 SNORD50B-201ENST00000364995 70 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 MIR539-201ENST00000365690 78 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 RNU6-1336P-201ENST00000383886 109 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 SNORA75.5-201ENST00000391291 81 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 RNA5SP450-201ENST00000411206 102 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 AC011406.1-201ENST00000512440 370 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 RNU6-1333P-201ENST00000516162 93 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 RNU6-1146P-201ENST00000516282 102 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 RNU6-197P-201ENST00000516680 100 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 AP001328.1-201ENST00000528550 176 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 AC120024.3-201ENST00000603167 156 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 AC073413.2-201ENST00000604332 360 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 uc_338.4-201ENST00000616635 176 ntBASIC2.01□□□□□ -2.09
VCPIP1Q96JH7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
VCPIP1Q96JH7 Y_RNA.127-201ENST00000363386 109 ntBASIC2□□□□□ -2.09
VCPIP1Q96JH7 RNU6-484P-201ENST00000384016 107 ntBASIC2□□□□□ -2.09
VCPIP1Q96JH7 RNU2-70P-201ENST00000410718 179 ntBASIC2□□□□□ -2.09
VCPIP1Q96JH7 RNU2-40P-201ENST00000410833 196 ntBASIC2□□□□□ -2.09
VCPIP1Q96JH7 RNA5SP489-201ENST00000410986 109 ntBASIC2□□□□□ -2.09
VCPIP1Q96JH7 RNU2-55P-201ENST00000411146 174 ntBASIC2□□□□□ -2.09
VCPIP1Q96JH7 AC233266.1-201ENST00000454518 96 ntBASIC2□□□□□ -2.09
VCPIP1Q96JH7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2□□□□□ -2.09
VCPIP1Q96JH7 RNU6-1053P-201ENST00000515930 101 ntBASIC2□□□□□ -2.09
VCPIP1Q96JH7 RNA5SP364-201ENST00000516938 78 ntBASIC2□□□□□ -2.09
VCPIP1Q96JH7 AC090142.3-201ENST00000519012 385 ntBASIC2□□□□□ -2.09
VCPIP1Q96JH7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2□□□□□ -2.09
VCPIP1Q96JH7 AC242852.1-201ENST00000612151 96 ntBASIC2□□□□□ -2.09
VCPIP1Q96JH7 AC244015.1-201ENST00000622301 99 ntBASIC2□□□□□ -2.09
VCPIP1Q96JH7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VCPIP1Q96JH7 snoU2-30.2-201ENST00000362805 70 ntBASIC1.99□□□□□ -2.09
VCPIP1Q96JH7 SNORA33-201ENST00000363664 130 ntBASIC1.99□□□□□ -2.09
VCPIP1Q96JH7 Y_RNA.796-201ENST00000364268 102 ntBASIC1.99□□□□□ -2.09
VCPIP1Q96JH7 Y_RNA.799-201ENST00000364992 102 ntBASIC1.99□□□□□ -2.09
VCPIP1Q96JH7 RNU6-597P-201ENST00000365620 102 ntBASIC1.99□□□□□ -2.09
VCPIP1Q96JH7 RNA5SP467-201ENST00000391274 118 ntBASIC1.99□□□□□ -2.09
VCPIP1Q96JH7 AC019129.1-201ENST00000403786 261 ntBASIC1.99□□□□□ -2.09
VCPIP1Q96JH7 AC099677.2-201ENST00000436385 175 ntBASIC1.99□□□□□ -2.09
VCPIP1Q96JH7 MIR4498-201ENST00000577599 66 ntBASIC1.99□□□□□ -2.09
VCPIP1Q96JH7 AL359881.1-201ENST00000602916 267 ntBASIC1.99□□□□□ -2.09
VCPIP1Q96JH7 JPX_2.1-201ENST00000614161 69 ntBASIC1.99□□□□□ -2.09
VCPIP1Q96JH7 RNU6-862P-201ENST00000362804 105 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 Y_RNA.91-201ENST00000363042 107 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 RNU1-96P-201ENST00000364163 162 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 SNORA25.7-201ENST00000364375 127 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 Y_RNA.251-201ENST00000364551 99 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 RNA5SP205-201ENST00000364653 136 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 SNORD116-14-201ENST00000383894 92 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 SNORD116-17-201ENST00000383929 92 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 SNORD116-15-201ENST00000384445 92 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 SNORD116-19-201ENST00000384729 92 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 Y_RNA.584-201ENST00000391090 114 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 RNA5SP465-201ENST00000391195 109 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 AL117342.1-201ENST00000404861 406 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 AC245047.4-201ENST00000433189 144 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 AL353689.1-201ENST00000438895 199 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 ATP5J2P3-201ENST00000451550 258 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 SNORD11-201ENST00000459124 84 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 RN7SL274P-201ENST00000492268 272 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 RNA5SP182-201ENST00000516064 82 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 SNORD77.4-201ENST00000516158 81 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 RNU7-99P-201ENST00000516271 62 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 RNVU1-2-201ENST00000516326 135 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 SNRPGP19-201ENST00000603826 189 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 Pinc.1-201ENST00000616452 154 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 AP001340.1-201ENST00000624405 217 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 MIR338-201ENST00000636369 67 ntBASIC1.98□□□□□ -2.09
VCPIP1Q96JH7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms