Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 Y_RNA.700-201ENST00000516806 100 ntBASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 AC022559.1-201ENST00000520905 205 ntBASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 AC087685.1-201ENST00000587507 141 ntBASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 AL391903.3-201ENST00000612158 163 ntBASIC1.97□□□□□ -2.09
CDK5RAP3Q96JB5 MIR660-201ENST00000385235 97 ntBASIC1.96□□□□□ -2.1
CDK5RAP3Q96JB5 MIR802-201ENST00000390235 94 ntBASIC1.96□□□□□ -2.1
CDK5RAP3Q96JB5 U8.13-201ENST00000390842 128 ntBASIC1.96□□□□□ -2.1
CDK5RAP3Q96JB5 MIR934-201ENST00000401241 83 ntBASIC1.96□□□□□ -2.1
CDK5RAP3Q96JB5 Y_RNA.797-201ENST00000515977 94 ntBASIC1.96□□□□□ -2.1
CDK5RAP3Q96JB5 RNU7-149P-201ENST00000516739 59 ntBASIC1.96□□□□□ -2.1
CDK5RAP3Q96JB5 AP002392.1-201ENST00000537692 208 ntBASIC1.96□□□□□ -2.1
CDK5RAP3Q96JB5 MIR4778-201ENST00000577635 80 ntBASIC1.96□□□□□ -2.1
CDK5RAP3Q96JB5 MIR4744-201ENST00000581563 82 ntBASIC1.96□□□□□ -2.1
CDK5RAP3Q96JB5 Y_RNA.182-201ENST00000363880 111 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 SNORD14E-201ENST00000364009 85 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 Y_RNA.785-201ENST00000384290 109 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 MIR194-1-201ENST00000384892 85 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 SNORD72-201ENST00000390994 80 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-1228P-201ENST00000391014 107 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 Y_RNA.622-201ENST00000411091 108 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 AC004965.1-201ENST00000413033 213 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 AC093850.1-201ENST00000454121 251 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 snoU13.9-201ENST00000458927 103 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 snoU13.15-201ENST00000459407 104 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-295P-201ENST00000516901 104 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 AC008507.4-201ENST00000585464 127 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 MIR6845-201ENST00000613182 61 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 Pinc.1-201ENST00000616452 154 ntBASIC1.95□□□□□ -2.1
CDK5RAP3Q96JB5 ICE2P2-201ENST00000483823 2787 ntBASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-1123P-201ENST00000362347 106 ntBASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 Y_RNA.121-201ENST00000363309 113 ntBASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 RNY3P5-201ENST00000384127 102 ntBASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 MIR1261-201ENST00000408659 82 ntBASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 snoU13.26-201ENST00000459452 105 ntBASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 SNORD77.4-201ENST00000516158 81 ntBASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 SUMO2P16-201ENST00000519475 264 ntBASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 MIR4285-201ENST00000581001 85 ntBASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 AC004792.1-201ENST00000614523 137 ntBASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 AC027279.3-201ENST00000625055 122 ntBASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDK5RAP3Q96JB5 Y_RNA.233-201ENST00000364407 101 ntBASIC1.93□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-578P-201ENST00000390980 103 ntBASIC1.93□□□□□ -2.1
CDK5RAP3Q96JB5 MIR891A-201ENST00000401237 79 ntBASIC1.93□□□□□ -2.1
CDK5RAP3Q96JB5 AL161935.2-201ENST00000414627 60 ntBASIC1.93□□□□□ -2.1
CDK5RAP3Q96JB5 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.93□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-182P-201ENST00000516970 105 ntBASIC1.93□□□□□ -2.1
CDK5RAP3Q96JB5 SNORA77B-201ENST00000578179 125 ntBASIC1.93□□□□□ -2.1
CDK5RAP3Q96JB5 AC072026.1-201ENST00000605023 201 ntBASIC1.93□□□□□ -2.1
CDK5RAP3Q96JB5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.93□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-833P-201ENST00000363486 107 ntBASIC1.92□□□□□ -2.1
CDK5RAP3Q96JB5 Y_RNA.435-201ENST00000384095 112 ntBASIC1.92□□□□□ -2.1
CDK5RAP3Q96JB5 HMGN2P32-201ENST00000444648 269 ntBASIC1.92□□□□□ -2.1
CDK5RAP3Q96JB5 AL121914.1-201ENST00000450188 156 ntBASIC1.92□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-561P-201ENST00000516222 102 ntBASIC1.92□□□□□ -2.1
CDK5RAP3Q96JB5 AC109810.1-201ENST00000534066 224 ntBASIC1.92□□□□□ -2.1
CDK5RAP3Q96JB5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.92□□□□□ -2.1
CDK5RAP3Q96JB5 AC108706.1-201ENST00000611053 297 ntBASIC1.92□□□□□ -2.1
CDK5RAP3Q96JB5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.92□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-1138P-201ENST00000365359 106 ntBASIC1.91□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-728P-201ENST00000365375 104 ntBASIC1.91□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-442P-201ENST00000383968 104 ntBASIC1.91□□□□□ -2.1
CDK5RAP3Q96JB5 MIR513A1-201ENST00000385138 129 ntBASIC1.91□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-907P-201ENST00000390924 102 ntBASIC1.91□□□□□ -2.1
CDK5RAP3Q96JB5 SNRPGP8-201ENST00000454064 226 ntBASIC1.91□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-1219P-201ENST00000516143 112 ntBASIC1.91□□□□□ -2.1
CDK5RAP3Q96JB5 RNU6-1299P-201ENST00000516316 100 ntBASIC1.91□□□□□ -2.1
CDK5RAP3Q96JB5 DEFB122-202ENST00000569013 197 ntBASIC1.91□□□□□ -2.1
CDK5RAP3Q96JB5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.91□□□□□ -2.1
CDK5RAP3Q96JB5 MIR8081-201ENST00000611533 95 ntBASIC1.91□□□□□ -2.1
CDK5RAP3Q96JB5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.91□□□□□ -2.1
CDK5RAP3Q96JB5 SNORD45.3-201ENST00000363836 72 ntBASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 Y_RNA.242-201ENST00000364473 110 ntBASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 Y_RNA.336-201ENST00000365307 109 ntBASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 RNA5SP259-201ENST00000365541 109 ntBASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 Y_RNA.412-201ENST00000384001 104 ntBASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 MIR1289-2-201ENST00000408360 111 ntBASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 HSPE1P24-201ENST00000450782 238 ntBASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 RNU7-120P-201ENST00000459334 63 ntBASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 MIR4662B-201ENST00000579498 81 ntBASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 MIR502-201ENST00000606349 86 ntBASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 AC106754.2-201ENST00000623006 233 ntBASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 U6.106-201ENST00000636360 105 ntBASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-275P-201ENST00000364910 107 ntBASIC1.89□□□□□ -2.11
CDK5RAP3Q96JB5 Y_RNA.432-201ENST00000384087 111 ntBASIC1.89□□□□□ -2.11
CDK5RAP3Q96JB5 Y_RNA.486-201ENST00000384398 107 ntBASIC1.89□□□□□ -2.11
CDK5RAP3Q96JB5 MIR15B-201ENST00000385045 98 ntBASIC1.89□□□□□ -2.11
CDK5RAP3Q96JB5 RN7SKP51-201ENST00000410781 304 ntBASIC1.89□□□□□ -2.11
CDK5RAP3Q96JB5 RNU2-55P-201ENST00000411146 174 ntBASIC1.89□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-970P-201ENST00000516312 107 ntBASIC1.89□□□□□ -2.11
CDK5RAP3Q96JB5 SNORA25.15-201ENST00000516487 89 ntBASIC1.89□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-861P-201ENST00000516745 106 ntBASIC1.89□□□□□ -2.11
CDK5RAP3Q96JB5 RNU6-250P-201ENST00000516958 103 ntBASIC1.89□□□□□ -2.11
CDK5RAP3Q96JB5 MIR8063-201ENST00000621930 81 ntBASIC1.89□□□□□ -2.11
CDK5RAP3Q96JB5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms