Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 MIR4422-201ENST00000581938 83 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 RNU2-4P-201ENST00000606190 192 ntBASIC2.6□□□□□ -1.99
ZNF428Q96B54 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
ZNF428Q96B54 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
ZNF428Q96B54 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
ZNF428Q96B54 SNORD68-201ENST00000363214 84 ntBASIC2.59□□□□□ -1.99
ZNF428Q96B54 RNU6-1209P-201ENST00000363655 107 ntBASIC2.59□□□□□ -1.99
ZNF428Q96B54 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.59□□□□□ -1.99
ZNF428Q96B54 RNA5SP168-201ENST00000516642 112 ntBASIC2.59□□□□□ -1.99
ZNF428Q96B54 AL021707.8-201ENST00000609428 183 ntBASIC2.59□□□□□ -1.99
ZNF428Q96B54 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.59□□□□□ -1.99
ZNF428Q96B54 SNORD3E-202ENST00000627253 216 ntBASIC2.59□□□□□ -1.99
ZNF428Q96B54 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.58□□□□□ -2
ZNF428Q96B54 Y_RNA.8-201ENST00000362353 102 ntBASIC2.58□□□□□ -2
ZNF428Q96B54 Y_RNA.226-201ENST00000364337 114 ntBASIC2.58□□□□□ -2
ZNF428Q96B54 RNU6-1130P-201ENST00000365434 107 ntBASIC2.58□□□□□ -2
ZNF428Q96B54 Y_RNA.506-201ENST00000384494 102 ntBASIC2.58□□□□□ -2
ZNF428Q96B54 RNU6-1135P-201ENST00000411083 103 ntBASIC2.58□□□□□ -2
ZNF428Q96B54 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.58□□□□□ -2
ZNF428Q96B54 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.58□□□□□ -2
ZNF428Q96B54 MRPS18CP4-201ENST00000535821 231 ntBASIC2.58□□□□□ -2
ZNF428Q96B54 Z83818.1-201ENST00000603584 150 ntBASIC2.58□□□□□ -2
ZNF428Q96B54 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
ZNF428Q96B54 MIRLET7C-201ENST00000362160 84 ntBASIC2.57□□□□□ -2
ZNF428Q96B54 Y_RNA.4-201ENST00000362333 112 ntBASIC2.57□□□□□ -2
ZNF428Q96B54 RNA5SP160-201ENST00000364866 120 ntBASIC2.57□□□□□ -2
ZNF428Q96B54 RNU4-17P-201ENST00000365598 141 ntBASIC2.57□□□□□ -2
ZNF428Q96B54 Y_RNA.412-201ENST00000384001 104 ntBASIC2.57□□□□□ -2
ZNF428Q96B54 MT-TT-201ENST00000387460 66 ntBASIC2.57□□□□□ -2
ZNF428Q96B54 SNORA26-201ENST00000391286 122 ntBASIC2.57□□□□□ -2
ZNF428Q96B54 RNU6-383P-201ENST00000410864 94 ntBASIC2.57□□□□□ -2
ZNF428Q96B54 AC245517.4-201ENST00000448601 281 ntBASIC2.57□□□□□ -2
ZNF428Q96B54 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.57□□□□□ -2
ZNF428Q96B54 AC015688.6-201ENST00000577737 104 ntBASIC2.57□□□□□ -2
ZNF428Q96B54 MIR6845-201ENST00000613182 61 ntBASIC2.57□□□□□ -2
ZNF428Q96B54 U6.106-201ENST00000636360 105 ntBASIC2.57□□□□□ -2
ZNF428Q96B54 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZNF428Q96B54 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZNF428Q96B54 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
ZNF428Q96B54 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZNF428Q96B54 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.56□□□□□ -2
ZNF428Q96B54 Y_RNA.121-201ENST00000363309 113 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 RNU6-1138P-201ENST00000365359 106 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 Y_RNA.398-201ENST00000383952 99 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 MIR452-201ENST00000385020 85 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 MIR676-201ENST00000390702 67 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 MIR1278-201ENST00000408753 81 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 RNU4-61P-201ENST00000411243 107 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 RNU6-717P-201ENST00000459076 104 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 SNORD11-201ENST00000459124 84 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 RNA5SP458-201ENST00000516188 119 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 RNU6-561P-201ENST00000516222 102 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 RPL23AP91-201ENST00000569211 455 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 MIR5089-201ENST00000580047 84 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 AL359851.1-201ENST00000569460 4997 ntBASIC2.56□□□□□ -2
ZNF428Q96B54 RNU6-1084P-201ENST00000362498 107 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 SNORD14E-201ENST00000364009 85 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 Y_RNA.338-201ENST00000365320 114 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 RNU6-163P-201ENST00000384396 106 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 MIR616-201ENST00000385293 97 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 U8.13-201ENST00000390842 128 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 RNU6-381P-201ENST00000391259 108 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
ZNF428Q96B54 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 MIR1287-201ENST00000408492 90 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
ZNF428Q96B54 ICE2P2-201ENST00000483823 2787 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 RNA5SP445-201ENST00000515889 115 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 RNU7-12P-201ENST00000516030 62 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 RNU6-295P-201ENST00000516901 104 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 MIR8081-201ENST00000611533 95 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 uc_338.4-201ENST00000616635 176 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 U2.22-201ENST00000636441 106 ntBASIC2.55□□□□□ -2
ZNF428Q96B54 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF428Q96B54 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ZNF428Q96B54 Y_RNA.24-201ENST00000362508 103 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 RNU6-199P-201ENST00000362954 107 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 Y_RNA.140-201ENST00000363474 103 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 Y_RNA.240-201ENST00000364469 95 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 RNU6-442P-201ENST00000383968 104 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 Y_RNA.571-201ENST00000384753 98 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 MIR513A1-201ENST00000385138 129 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 MIR802-201ENST00000390235 94 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 RNU6-1228P-201ENST00000391014 107 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 RNU1-78P-201ENST00000391248 165 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 HMGN2P38-201ENST00000423806 265 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 RNU6-322P-201ENST00000516010 103 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 RNU6-1212P-201ENST00000517023 104 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 AP000553.5-201ENST00000641933 54 ntBASIC2.54□□□□□ -2
ZNF428Q96B54 AL157777.2-201ENST00000258070 137 ntBASIC2.53□□□□□ -2
ZNF428Q96B54 Y_RNA.508-201ENST00000384502 114 ntBASIC2.53□□□□□ -2
ZNF428Q96B54 RNU6-1065P-201ENST00000384513 106 ntBASIC2.53□□□□□ -2
ZNF428Q96B54 SNORA12.1-201ENST00000390873 148 ntBASIC2.53□□□□□ -2
ZNF428Q96B54 U8.16-201ENST00000391279 133 ntBASIC2.53□□□□□ -2
ZNF428Q96B54 AC245047.8-201ENST00000456455 284 ntBASIC2.53□□□□□ -2
ZNF428Q96B54 RNA5SP272-201ENST00000516095 111 ntBASIC2.53□□□□□ -2
ZNF428Q96B54 AC002984.1-201ENST00000591692 448 ntBASIC2.53□□□□□ -2
ZNF428Q96B54 AL353997.5-201ENST00000618886 171 ntBASIC2.53□□□□□ -2
ZNF428Q96B54 RNY1P11-201ENST00000363759 113 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms