Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RNU6-887P-201ENST00000410660 100 ntBASIC3.47□□□□□ -1.85
HLA-CQ95604 RNA5SP306-201ENST00000411087 107 ntBASIC3.47□□□□□ -1.85
HLA-CQ95604 RPL23AP63-201ENST00000498752 471 ntBASIC3.47□□□□□ -1.85
HLA-CQ95604 AC008885.1-201ENST00000514930 301 ntBASIC3.47□□□□□ -1.85
HLA-CQ95604 MIR4777-201ENST00000583710 86 ntBASIC3.47□□□□□ -1.85
HLA-CQ95604 AC096720.1-201ENST00000604441 183 ntBASIC3.47□□□□□ -1.85
HLA-CQ95604 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.47□□□□□ -1.85
HLA-CQ95604 MIR6841-201ENST00000637129 72 ntBASIC3.47□□□□□ -1.85
HLA-CQ95604 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
HLA-CQ95604 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
HLA-CQ95604 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HLA-CQ95604 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-CQ95604 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-CQ95604 RNU4-82P-201ENST00000362443 140 ntBASIC3.46□□□□□ -1.86
HLA-CQ95604 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-CQ95604 SNORD21-201ENST00000383953 95 ntBASIC3.46□□□□□ -1.86
HLA-CQ95604 RNU6-1201P-201ENST00000384227 107 ntBASIC3.46□□□□□ -1.86
HLA-CQ95604 AL034345.1-201ENST00000407768 123 ntBASIC3.46□□□□□ -1.86
HLA-CQ95604 AL353813.1-201ENST00000440700 253 ntBASIC3.46□□□□□ -1.86
HLA-CQ95604 RNU7-170P-201ENST00000459303 61 ntBASIC3.46□□□□□ -1.86
HLA-CQ95604 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.46□□□□□ -1.86
HLA-CQ95604 ELOCP29-201ENST00000588193 334 ntBASIC3.46□□□□□ -1.86
HLA-CQ95604 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HLA-CQ95604 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-CQ95604 Y_RNA.430-201ENST00000384081 110 ntBASIC3.45□□□□□ -1.86
HLA-CQ95604 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-CQ95604 DNAJC19P9-201ENST00000555084 351 ntBASIC3.45□□□□□ -1.86
HLA-CQ95604 U7.8-201ENST00000619968 63 ntBASIC3.45□□□□□ -1.86
HLA-CQ95604 U6.98-201ENST00000637157 84 ntBASIC3.45□□□□□ -1.86
HLA-CQ95604 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-CQ95604 MAPK10-373ENST00000641983 6772 ntBASIC3.45□□□□□ -1.86
HLA-CQ95604 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HLA-CQ95604 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-CQ95604 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-CQ95604 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-CQ95604 MAPK10-362ENST00000641864 4484 ntBASIC3.44□□□□□ -1.86
HLA-CQ95604 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-CQ95604 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-CQ95604 RNU6-1313P-201ENST00000362622 102 ntBASIC3.44□□□□□ -1.86
HLA-CQ95604 SNORA54-201ENST00000384281 123 ntBASIC3.44□□□□□ -1.86
HLA-CQ95604 MIR452-201ENST00000385020 85 ntBASIC3.44□□□□□ -1.86
HLA-CQ95604 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HLA-CQ95604 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-CQ95604 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-CQ95604 SNORA70.19-201ENST00000516717 90 ntBASIC3.44□□□□□ -1.86
HLA-CQ95604 AC092435.3-201ENST00000565538 3654 ntBASIC3.44□□□□□ -1.86
HLA-CQ95604 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-CQ95604 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-CQ95604 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-CQ95604 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-CQ95604 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-CQ95604 SNORA22.1-201ENST00000362701 134 ntBASIC3.43□□□□□ -1.86
HLA-CQ95604 SNORA24-201ENST00000384096 131 ntBASIC3.43□□□□□ -1.86
HLA-CQ95604 Y_RNA.494-201ENST00000384432 111 ntBASIC3.43□□□□□ -1.86
HLA-CQ95604 RNU6-279P-201ENST00000391297 101 ntBASIC3.43□□□□□ -1.86
HLA-CQ95604 MIR1255A-201ENST00000408338 113 ntBASIC3.43□□□□□ -1.86
HLA-CQ95604 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-CQ95604 AC007336.1-201ENST00000576365 3828 ntBASIC3.43□□□□□ -1.86
HLA-CQ95604 MIR486-1-201ENST00000612171 68 ntBASIC3.43□□□□□ -1.86
HLA-CQ95604 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-CQ95604 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-CQ95604 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-CQ95604 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-CQ95604 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
HLA-CQ95604 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
HLA-CQ95604 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HLA-CQ95604 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HLA-CQ95604 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-CQ95604 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-CQ95604 RNU1-58P-201ENST00000362413 163 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 SNORD116-10-201ENST00000363791 102 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 SNORD115-35-201ENST00000365122 82 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 RNU6-979P-201ENST00000383896 107 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 SNORA7.5-201ENST00000410672 110 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 RNA5SP225-201ENST00000410874 135 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 RNA5SP508-201ENST00000411327 119 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 BTF3P4-201ENST00000418852 495 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 AC022018.1-201ENST00000430685 241 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-CQ95604 RNU7-171P-201ENST00000459581 62 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 Y_RNA.659-201ENST00000515994 113 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 RNU6-162P-201ENST00000516228 103 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 RNU6-1116P-201ENST00000517269 99 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 AL513534.2-201ENST00000603836 250 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 AC022513.1-201ENST00000624512 117 ntBASIC3.42□□□□□ -1.86
HLA-CQ95604 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-CQ95604 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HLA-CQ95604 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HLA-CQ95604 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-CQ95604 Y_RNA.171-201ENST00000363760 102 ntBASIC3.41□□□□□ -1.86
HLA-CQ95604 SNORA71.1-201ENST00000364523 117 ntBASIC3.41□□□□□ -1.86
HLA-CQ95604 SNORA1.1-201ENST00000364671 133 ntBASIC3.41□□□□□ -1.86
HLA-CQ95604 RNU2-40P-201ENST00000410833 196 ntBASIC3.41□□□□□ -1.86
HLA-CQ95604 EEF1A1P41-201ENST00000414667 207 ntBASIC3.41□□□□□ -1.86
HLA-CQ95604 SNORA31.10-201ENST00000516482 106 ntBASIC3.41□□□□□ -1.86
HLA-CQ95604 RNA5SP33-201ENST00000516687 98 ntBASIC3.41□□□□□ -1.86
HLA-CQ95604 RNU7-181P-201ENST00000517234 74 ntBASIC3.41□□□□□ -1.86
HLA-CQ95604 NDUFB9P3-201ENST00000521269 501 ntBASIC3.41□□□□□ -1.86
HLA-CQ95604 MIR4666B-201ENST00000578142 81 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms