Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL049830.1-201ENST00000468034 425 ntBASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-162P-201ENST00000516228 103 ntBASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 RNU6-795P-201ENST00000516323 103 ntBASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 MIR4694-201ENST00000578534 80 ntBASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 MIR4762-201ENST00000585261 75 ntBASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 MIR338-201ENST00000636369 67 ntBASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.91□□□□□ -1.94
SHKBP1Q8TBC3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-859P-201ENST00000362728 107 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-170P-201ENST00000362832 104 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 SNORD14E-201ENST00000364009 85 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-242P-201ENST00000384359 107 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 Y_RNA.507-201ENST00000384500 99 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 MIR9-1-201ENST00000385198 89 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 RNA5SP21-201ENST00000410917 96 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 RNU7-80P-201ENST00000459562 61 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-521P-201ENST00000516663 105 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 SNORA18.7-201ENST00000516910 131 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 AP003484.1-201ENST00000530974 250 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 AP002004.2-201ENST00000531656 154 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.9□□□□□ -1.95
SHKBP1Q8TBC3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-661P-201ENST00000362409 107 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 SNORD115-19-201ENST00000363098 82 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 SNORD115-18-201ENST00000363293 82 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-832P-201ENST00000363319 107 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 U8.5-201ENST00000364528 136 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 SNORD115-17-201ENST00000364612 82 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 RNU4-16P-201ENST00000364737 141 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-279P-201ENST00000391297 101 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 RNU2-48P-201ENST00000410694 191 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 MICF-203ENST00000432679 129 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 MIR4778-201ENST00000577635 80 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 MIR548Z-201ENST00000584743 97 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 Y_RNA.773-201ENST00000607168 90 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 MIR1255B1-201ENST00000636325 63 ntBASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SHKBP1Q8TBC3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-363P-201ENST00000362895 105 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 SNORD68-201ENST00000363214 84 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 RNU1-23P-201ENST00000363361 144 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 Y_RNA.360-201ENST00000365512 102 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 Y_RNA.454-201ENST00000384224 113 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 MIR512-1-201ENST00000384913 84 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 MIR95-201ENST00000385072 81 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 AC087499.4-201ENST00000448505 178 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 MIR4474-201ENST00000579189 78 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 AL353149.1-201ENST00000610667 244 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 UCA1.1-201ENST00000620952 75 ntBASIC2.88□□□□□ -1.95
SHKBP1Q8TBC3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-979P-201ENST00000383896 107 ntBASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 MIR218-1-201ENST00000384999 110 ntBASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-733P-201ENST00000410759 104 ntBASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 AL161788.1-201ENST00000441805 169 ntBASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 RN7SL499P-201ENST00000481141 276 ntBASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 RPS23P4-201ENST00000487908 423 ntBASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 RNU1-142P-201ENST00000516682 145 ntBASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 AC078899.2-201ENST00000595282 212 ntBASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 AL161431.1-201ENST00000618966 4205 ntBASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SHKBP1Q8TBC3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-1084P-201ENST00000362498 107 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-1125P-201ENST00000363601 107 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 Y_RNA.155-201ENST00000363632 101 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 snoU2-30.1-201ENST00000365012 70 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-1296P-201ENST00000383879 107 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 RNA5SP144-201ENST00000410846 116 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 AL353813.1-201ENST00000440700 253 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 AC006483.1-201ENST00000487308 313 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 SNORD45.4-201ENST00000516629 73 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 SCARNA3-201ENST00000517097 143 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 MIR5588-201ENST00000581890 63 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 MIR5739-201ENST00000619803 80 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 AC095038.3-201ENST00000634439 195 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 MIR203B-201ENST00000636080 86 ntBASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
SHKBP1Q8TBC3 RNU4-67P-201ENST00000364569 141 ntBASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 Y_RNA.336-201ENST00000365307 109 ntBASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 RNU6-409P-201ENST00000384114 104 ntBASIC2.85□□□□□ -1.95
SHKBP1Q8TBC3 MIR605-201ENST00000385078 83 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms