Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 RNU6-235P-201ENST00000362644 107 ntBASIC2.4□□□□□ -2.03
SHCBP1Q8NEM2 Y_RNA.267-201ENST00000364679 109 ntBASIC2.4□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-160P-201ENST00000384591 107 ntBASIC2.4□□□□□ -2.03
SHCBP1Q8NEM2 SNRPGP10-201ENST00000432323 225 ntBASIC2.4□□□□□ -2.03
SHCBP1Q8NEM2 MRPS17P9-201ENST00000511924 393 ntBASIC2.4□□□□□ -2.03
SHCBP1Q8NEM2 RNU1-142P-201ENST00000516682 145 ntBASIC2.4□□□□□ -2.03
SHCBP1Q8NEM2 RNU2-60P-201ENST00000517290 128 ntBASIC2.4□□□□□ -2.03
SHCBP1Q8NEM2 AC007751.1-201ENST00000529260 376 ntBASIC2.4□□□□□ -2.03
SHCBP1Q8NEM2 AC131055.1-201ENST00000584626 316 ntBASIC2.4□□□□□ -2.03
SHCBP1Q8NEM2 MIR6840-201ENST00000611937 71 ntBASIC2.4□□□□□ -2.03
SHCBP1Q8NEM2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
SHCBP1Q8NEM2 Y_RNA.120-201ENST00000363304 110 ntBASIC2.39□□□□□ -2.03
SHCBP1Q8NEM2 Y_RNA.280-201ENST00000364765 112 ntBASIC2.39□□□□□ -2.03
SHCBP1Q8NEM2 Y_RNA.563-201ENST00000384707 108 ntBASIC2.39□□□□□ -2.03
SHCBP1Q8NEM2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SHCBP1Q8NEM2 SNORD72-201ENST00000390994 80 ntBASIC2.39□□□□□ -2.03
SHCBP1Q8NEM2 RPS26P45-201ENST00000471748 340 ntBASIC2.39□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-126P-201ENST00000516685 103 ntBASIC2.39□□□□□ -2.03
SHCBP1Q8NEM2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SHCBP1Q8NEM2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SHCBP1Q8NEM2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
SHCBP1Q8NEM2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 SNORA8-201ENST00000384574 139 ntBASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 RNA5SP323-201ENST00000391094 133 ntBASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 RNU11-5P-201ENST00000391216 129 ntBASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 MLLT10P1-201ENST00000418346 262 ntBASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 AL158823.1-201ENST00000418441 478 ntBASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-365P-201ENST00000517113 106 ntBASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 AL358944.1-201ENST00000528537 144 ntBASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 AC090049.2-201ENST00000550377 109 ntBASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 Y_RNA.757-201ENST00000578934 114 ntBASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 AL365205.2-201ENST00000594586 68 ntBASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 AL591926.4-201ENST00000616895 298 ntBASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.38□□□□□ -2.03
SHCBP1Q8NEM2 SNORA1B-201ENST00000362535 133 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-862P-201ENST00000362804 105 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-508P-201ENST00000363231 103 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 RNA5SP493-201ENST00000364115 91 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-1325P-201ENST00000364905 105 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 RNA5SP182-201ENST00000516064 82 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 RN7SKP179-201ENST00000516126 217 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 Y_RNA.692-201ENST00000516627 105 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 Y_RNA.712-201ENST00000517011 92 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 CYCSP26-201ENST00000534107 320 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 MIR3169-201ENST00000578032 83 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 AC008507.4-201ENST00000585464 127 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 MIR6845-201ENST00000613182 61 ntBASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
SHCBP1Q8NEM2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 MIR126-201ENST00000362291 85 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-834P-201ENST00000362367 110 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-1164P-201ENST00000364428 107 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-44P-201ENST00000384045 107 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 SNORA1-201ENST00000384107 130 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 RNU1-148P-201ENST00000384472 162 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 AC019129.1-201ENST00000403786 261 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 RNA5SP127-201ENST00000411051 133 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 CST2P1-201ENST00000425770 87 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 AC099677.2-201ENST00000436385 175 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 AL163195.1-201ENST00000496941 348 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-919P-201ENST00000516731 104 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 AC024995.1-201ENST00000523014 93 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 MIR3121-201ENST00000579680 77 ntBASIC2.36□□□□□ -2.03
SHCBP1Q8NEM2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 Y_RNA.52-201ENST00000362760 96 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 Y_RNA.140-201ENST00000363474 103 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 SNORD61-201ENST00000384252 73 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 MIR515-2-201ENST00000384883 83 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 MIR515-1-201ENST00000384884 83 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 MIR624-201ENST00000385217 97 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 AL035461.1-201ENST00000421490 332 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 AL158147.1-201ENST00000443970 75 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-772P-201ENST00000516042 105 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 SNORA18.4-201ENST00000516440 124 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-504P-201ENST00000516568 104 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 Y_RNA.690-201ENST00000516603 95 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 AC022513.1-201ENST00000624512 117 ntBASIC2.35□□□□□ -2.03
SHCBP1Q8NEM2 Y_RNA.114-201ENST00000363265 113 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-309P-201ENST00000364573 106 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 MIR522-201ENST00000385071 87 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 MIR891A-201ENST00000401237 79 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 AL603914.1-201ENST00000401964 204 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 RNA5SP247-201ENST00000411181 105 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 AL049830.1-201ENST00000468034 425 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 Y_RNA.666-201ENST00000516187 112 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 RNU6-1270P-201ENST00000517128 108 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 AP002004.2-201ENST00000531656 154 ntBASIC2.34□□□□□ -2.03
SHCBP1Q8NEM2 MIR3129-201ENST00000581095 76 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms