Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 Y_RNA.441-201ENST00000384123 112 ntBASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 RNA5SP109-201ENST00000391010 116 ntBASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 Y_RNA.622-201ENST00000411091 108 ntBASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 AL356379.1-201ENST00000414105 126 ntBASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 RNVU1-2-201ENST00000516326 135 ntBASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 RNU6-341P-201ENST00000516973 96 ntBASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 AC024995.1-201ENST00000523014 93 ntBASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 AC084364.2-201ENST00000546924 395 ntBASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 AC022217.4-201ENST00000604389 163 ntBASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 AL021707.8-201ENST00000609428 183 ntBASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SLC44A5Q8NCS7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 SNORA1B-201ENST00000362535 133 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 Y_RNA.272-201ENST00000364696 102 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 RNU6-1130P-201ENST00000365434 107 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 Y_RNA.398-201ENST00000383952 99 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 MIR515-2-201ENST00000384883 83 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 MIR515-1-201ENST00000384884 83 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 RNA5SP496-201ENST00000391240 109 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 MIR1323-201ENST00000408090 73 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 MIR548M-201ENST00000408260 86 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 RN7SKP101-201ENST00000411376 320 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 AC004965.1-201ENST00000413033 213 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 AL121914.1-201ENST00000450188 156 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 AL359851.1-201ENST00000569460 4997 ntBASIC1.91□□□□□ -2.1
SLC44A5Q8NCS7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SLC44A5Q8NCS7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
SLC44A5Q8NCS7 RNU6-818P-201ENST00000364837 108 ntBASIC1.9□□□□□ -2.11
SLC44A5Q8NCS7 Y_RNA.506-201ENST00000384494 102 ntBASIC1.9□□□□□ -2.11
SLC44A5Q8NCS7 RNU6-1228P-201ENST00000391014 107 ntBASIC1.9□□□□□ -2.11
SLC44A5Q8NCS7 AL512604.1-201ENST00000404812 257 ntBASIC1.9□□□□□ -2.11
SLC44A5Q8NCS7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.9□□□□□ -2.11
SLC44A5Q8NCS7 AC245047.4-201ENST00000433189 144 ntBASIC1.9□□□□□ -2.11
SLC44A5Q8NCS7 RPS27P1-201ENST00000450552 247 ntBASIC1.9□□□□□ -2.11
SLC44A5Q8NCS7 SNRPGP8-201ENST00000454064 226 ntBASIC1.9□□□□□ -2.11
SLC44A5Q8NCS7 RNU6-346P-201ENST00000516288 111 ntBASIC1.9□□□□□ -2.11
SLC44A5Q8NCS7 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
SLC44A5Q8NCS7 MIR3133-201ENST00000583157 78 ntBASIC1.9□□□□□ -2.11
SLC44A5Q8NCS7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 RNU4-84P-201ENST00000364200 139 ntBASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 Y_RNA.253-201ENST00000364562 112 ntBASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 RNU6-187P-201ENST00000384139 106 ntBASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 RNU6-125P-201ENST00000384505 107 ntBASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 MIR15B-201ENST00000385045 98 ntBASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 MIR1276-201ENST00000408707 83 ntBASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 SNORD11-201ENST00000459124 84 ntBASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 NDUFA4P2-201ENST00000489989 244 ntBASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 MIR4431-201ENST00000579990 94 ntBASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 uc_338.20-201ENST00000621563 178 ntBASIC1.89□□□□□ -2.11
SLC44A5Q8NCS7 SNORD45.3-201ENST00000363836 72 ntBASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 RNU1-42P-201ENST00000364033 160 ntBASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 Y_RNA.357-201ENST00000365487 109 ntBASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 SNORD116-18-201ENST00000383961 92 ntBASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 SNORA12.1-201ENST00000390873 148 ntBASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 RNA5SP501-201ENST00000410990 112 ntBASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 AC006461.1-201ENST00000412637 326 ntBASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 AL049830.1-201ENST00000468034 425 ntBASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 MIR2681-201ENST00000581814 105 ntBASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 AC069114.2-201ENST00000604699 304 ntBASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 JPX_2.1-201ENST00000614161 69 ntBASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 AL591926.4-201ENST00000616895 298 ntBASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SLC44A5Q8NCS7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 RNU6-1019P-201ENST00000364424 107 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 RNU6-392P-201ENST00000364926 101 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 RNU6-728P-201ENST00000365375 104 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 RNA5SP465-201ENST00000391195 109 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 RNU11-5P-201ENST00000391216 129 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 MLLT10P1-201ENST00000418346 262 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 AC245047.3-201ENST00000429428 127 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 SNRPGP10-201ENST00000432323 225 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 AC009474.2-201ENST00000451383 136 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 RNA5SP233-201ENST00000459153 113 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 HMGN1P7-201ENST00000491722 313 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 RNU7-200P-201ENST00000516105 62 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 AC024614.2-201ENST00000577584 372 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 MIR6504-201ENST00000613520 61 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 uc_338.4-201ENST00000616635 176 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 ZNF702P-202ENST00000434269 1966 ntBASIC1.87□□□□□ -2.11
SLC44A5Q8NCS7 MIR126-201ENST00000362291 85 ntBASIC1.86□□□□□ -2.11
SLC44A5Q8NCS7 RNA5SP276-201ENST00000362580 94 ntBASIC1.86□□□□□ -2.11
SLC44A5Q8NCS7 RNU6-643P-201ENST00000384018 107 ntBASIC1.86□□□□□ -2.11
SLC44A5Q8NCS7 RNU6-746P-201ENST00000384112 109 ntBASIC1.86□□□□□ -2.11
SLC44A5Q8NCS7 RNY3P5-201ENST00000384127 102 ntBASIC1.86□□□□□ -2.11
SLC44A5Q8NCS7 MIR562-201ENST00000384894 95 ntBASIC1.86□□□□□ -2.11
SLC44A5Q8NCS7 RNA5SP450-201ENST00000411206 102 ntBASIC1.86□□□□□ -2.11
SLC44A5Q8NCS7 RNU7-94P-201ENST00000459576 63 ntBASIC1.86□□□□□ -2.11
SLC44A5Q8NCS7 SNORA31.10-201ENST00000516482 106 ntBASIC1.86□□□□□ -2.11
SLC44A5Q8NCS7 RNU2-56P-201ENST00000516826 190 ntBASIC1.86□□□□□ -2.11
SLC44A5Q8NCS7 AP002004.2-201ENST00000531656 154 ntBASIC1.86□□□□□ -2.11
SLC44A5Q8NCS7 SNORD53B-201ENST00000577887 78 ntBASIC1.86□□□□□ -2.11
SLC44A5Q8NCS7 SNORA4-201ENST00000584302 138 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms