Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RPS27P29-201ENST00000463110 252 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 RNA5SP380-201ENST00000517190 98 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.35□□□□□ -1.87
RNF135Q8IUD6 MIR4305-201ENST00000583252 102 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 UBL5P2-201ENST00000583788 219 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 ELOCP29-201ENST00000588193 334 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
RNF135Q8IUD6 MAPK10-266ENST00000641066 6555 ntBASIC3.35□□□□□ -1.87
RNF135Q8IUD6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RNF135Q8IUD6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF135Q8IUD6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
RNF135Q8IUD6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF135Q8IUD6 RNU1-133P-201ENST00000364867 167 ntBASIC3.34□□□□□ -1.87
RNF135Q8IUD6 SNORA54-201ENST00000384281 123 ntBASIC3.34□□□□□ -1.87
RNF135Q8IUD6 EEF1A1P41-201ENST00000414667 207 ntBASIC3.34□□□□□ -1.87
RNF135Q8IUD6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.34□□□□□ -1.87
RNF135Q8IUD6 RNU7-26P-201ENST00000458980 63 ntBASIC3.34□□□□□ -1.87
RNF135Q8IUD6 SNORD36C-201ENST00000516733 66 ntBASIC3.34□□□□□ -1.87
RNF135Q8IUD6 RNU7-6P-201ENST00000516845 62 ntBASIC3.34□□□□□ -1.87
RNF135Q8IUD6 U7.3-201ENST00000616123 62 ntBASIC3.34□□□□□ -1.87
RNF135Q8IUD6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
RNF135Q8IUD6 ICE2P2-201ENST00000483823 2787 ntBASIC3.34□□□□□ -1.88
RNF135Q8IUD6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF135Q8IUD6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF135Q8IUD6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
RNF135Q8IUD6 Y_RNA.10-201ENST00000362371 110 ntBASIC3.33□□□□□ -1.88
RNF135Q8IUD6 RNU6-1296P-201ENST00000383879 107 ntBASIC3.33□□□□□ -1.88
RNF135Q8IUD6 RNU6-787P-201ENST00000384032 107 ntBASIC3.33□□□□□ -1.88
RNF135Q8IUD6 SNORA7.4-201ENST00000384249 137 ntBASIC3.33□□□□□ -1.88
RNF135Q8IUD6 RNA5SP109-201ENST00000391010 116 ntBASIC3.33□□□□□ -1.88
RNF135Q8IUD6 RNU6-644P-201ENST00000391155 98 ntBASIC3.33□□□□□ -1.88
RNF135Q8IUD6 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF135Q8IUD6 RN7SL442P-201ENST00000473804 320 ntBASIC3.33□□□□□ -1.88
RNF135Q8IUD6 RNU6-162P-201ENST00000516228 103 ntBASIC3.33□□□□□ -1.88
RNF135Q8IUD6 uc_338.1-201ENST00000612113 180 ntBASIC3.33□□□□□ -1.88
RNF135Q8IUD6 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.33□□□□□ -1.88
RNF135Q8IUD6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF135Q8IUD6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF135Q8IUD6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RNF135Q8IUD6 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
RNF135Q8IUD6 RNU6-1125P-201ENST00000363601 107 ntBASIC3.32□□□□□ -1.88
RNF135Q8IUD6 SNORA38-201ENST00000363946 132 ntBASIC3.32□□□□□ -1.88
RNF135Q8IUD6 SNORA71.1-201ENST00000364523 117 ntBASIC3.32□□□□□ -1.88
RNF135Q8IUD6 Y_RNA.440-201ENST00000384120 114 ntBASIC3.32□□□□□ -1.88
RNF135Q8IUD6 RNU6-279P-201ENST00000391297 101 ntBASIC3.32□□□□□ -1.88
RNF135Q8IUD6 RNU6-938P-201ENST00000411285 103 ntBASIC3.32□□□□□ -1.88
RNF135Q8IUD6 RNU2-35P-201ENST00000516446 142 ntBASIC3.32□□□□□ -1.88
RNF135Q8IUD6 MIR4319-201ENST00000577285 85 ntBASIC3.32□□□□□ -1.88
RNF135Q8IUD6 MIR3126-201ENST00000577443 74 ntBASIC3.32□□□□□ -1.88
RNF135Q8IUD6 AC022513.1-201ENST00000624512 117 ntBASIC3.32□□□□□ -1.88
RNF135Q8IUD6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RNF135Q8IUD6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.31□□□□□ -1.88
RNF135Q8IUD6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
RNF135Q8IUD6 Y_RNA.531-201ENST00000384589 121 ntBASIC3.31□□□□□ -1.88
RNF135Q8IUD6 RNA5SP184-201ENST00000411071 108 ntBASIC3.31□□□□□ -1.88
RNF135Q8IUD6 AC096949.1-201ENST00000412047 152 ntBASIC3.31□□□□□ -1.88
RNF135Q8IUD6 AC004941.2-201ENST00000427009 228 ntBASIC3.31□□□□□ -1.88
RNF135Q8IUD6 AC022018.1-201ENST00000430685 241 ntBASIC3.31□□□□□ -1.88
RNF135Q8IUD6 AC113410.1-201ENST00000505029 247 ntBASIC3.31□□□□□ -1.88
RNF135Q8IUD6 RNU6-795P-201ENST00000516323 103 ntBASIC3.31□□□□□ -1.88
RNF135Q8IUD6 AP003484.1-201ENST00000530974 250 ntBASIC3.31□□□□□ -1.88
RNF135Q8IUD6 MIR3683-201ENST00000580847 82 ntBASIC3.31□□□□□ -1.88
RNF135Q8IUD6 AC012531.4-201ENST00000616509 177 ntBASIC3.31□□□□□ -1.88
RNF135Q8IUD6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.3□□□□□ -1.88
RNF135Q8IUD6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.3□□□□□ -1.88
RNF135Q8IUD6 SNORD56.5-201ENST00000364281 72 ntBASIC3.3□□□□□ -1.88
RNF135Q8IUD6 RNU6-675P-201ENST00000384236 104 ntBASIC3.3□□□□□ -1.88
RNF135Q8IUD6 RNA5SP508-201ENST00000411327 119 ntBASIC3.3□□□□□ -1.88
RNF135Q8IUD6 STAG3L5P-204ENST00000443759 179 ntBASIC3.3□□□□□ -1.88
RNF135Q8IUD6 AC087499.4-201ENST00000448505 178 ntBASIC3.3□□□□□ -1.88
RNF135Q8IUD6 SNORA18.7-201ENST00000516910 131 ntBASIC3.3□□□□□ -1.88
RNF135Q8IUD6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RNF135Q8IUD6 MIR2682-201ENST00000580305 110 ntBASIC3.3□□□□□ -1.88
RNF135Q8IUD6 AC005786.1-201ENST00000588553 154 ntBASIC3.3□□□□□ -1.88
RNF135Q8IUD6 RNU6-170P-201ENST00000362832 104 ntBASIC3.29□□□□□ -1.88
RNF135Q8IUD6 Y_RNA.507-201ENST00000384500 99 ntBASIC3.29□□□□□ -1.88
RNF135Q8IUD6 AL451046.2-201ENST00000403074 277 ntBASIC3.29□□□□□ -1.88
RNF135Q8IUD6 AL139132.1-201ENST00000431587 344 ntBASIC3.29□□□□□ -1.88
RNF135Q8IUD6 AC108938.1-201ENST00000451204 136 ntBASIC3.29□□□□□ -1.88
RNF135Q8IUD6 RN7SKP132-201ENST00000516001 208 ntBASIC3.29□□□□□ -1.88
RNF135Q8IUD6 SNORA64.4-201ENST00000516632 81 ntBASIC3.29□□□□□ -1.88
RNF135Q8IUD6 MIR4694-201ENST00000578534 80 ntBASIC3.29□□□□□ -1.88
RNF135Q8IUD6 AC022202.1-201ENST00000613515 211 ntBASIC3.29□□□□□ -1.88
RNF135Q8IUD6 MIR8054-201ENST00000620877 86 ntBASIC3.29□□□□□ -1.88
RNF135Q8IUD6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.29□□□□□ -1.88
RNF135Q8IUD6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.29□□□□□ -1.88
RNF135Q8IUD6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RNF135Q8IUD6 RNU1-58P-201ENST00000362413 163 ntBASIC3.28□□□□□ -1.88
RNF135Q8IUD6 MIR29C-201ENST00000385231 88 ntBASIC3.28□□□□□ -1.88
RNF135Q8IUD6 RNA5SP229-201ENST00000410809 99 ntBASIC3.28□□□□□ -1.88
RNF135Q8IUD6 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF135Q8IUD6 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
RNF135Q8IUD6 AL135938.1-201ENST00000443141 297 ntBASIC3.28□□□□□ -1.88
RNF135Q8IUD6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.28□□□□□ -1.88
RNF135Q8IUD6 AC114811.1-201ENST00000507207 168 ntBASIC3.28□□□□□ -1.88
RNF135Q8IUD6 AC104027.1-201ENST00000521887 300 ntBASIC3.28□□□□□ -1.88
RNF135Q8IUD6 SNORA28-201ENST00000606769 126 ntBASIC3.28□□□□□ -1.88
RNF135Q8IUD6 AC087741.2-201ENST00000619415 172 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms