Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 SNORA63D-201ENST00000364359 132 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 Y_RNA.400-201ENST00000383963 111 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 MIR17-201ENST00000385012 84 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 Y_RNA.622-201ENST00000411091 108 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 RPS27P21-201ENST00000486977 252 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 RNU6-406P-201ENST00000516470 107 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 RNA5SP153-201ENST00000516498 76 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 RNU6-197P-201ENST00000516680 100 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 MIR4419B-201ENST00000577260 68 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 MIR5094-201ENST00000578766 85 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 MIR4762-201ENST00000585261 75 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 AL591926.4-201ENST00000616895 298 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 Y_RNA.778-201ENST00000620203 90 ntBASIC2.19□□□□□ -2.06
UBE3BQ7Z3V4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 U8.5-201ENST00000364528 136 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 Y_RNA.432-201ENST00000384087 111 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 AC006461.1-201ENST00000412637 326 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 AC245047.3-201ENST00000429428 127 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 SNRPGP10-201ENST00000432323 225 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 OR9P1P-201ENST00000496431 281 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 RNU6-1299P-201ENST00000516316 100 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 RNVU1-2-201ENST00000516326 135 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 RNU6-126P-201ENST00000516685 103 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 RNU2-56P-201ENST00000516826 190 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 RNA5SP364-201ENST00000516938 78 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 SUB1P4-201ENST00000566062 339 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 MIR4662B-201ENST00000579498 81 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 AC087685.1-201ENST00000587507 141 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 DNAJC19P2-201ENST00000593340 302 ntBASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.18□□□□□ -2.06
UBE3BQ7Z3V4 MIR522-201ENST00000385071 87 ntBASIC2.17□□□□□ -2.06
UBE3BQ7Z3V4 RNA5SP109-201ENST00000391010 116 ntBASIC2.17□□□□□ -2.06
UBE3BQ7Z3V4 SNORA79-201ENST00000408376 140 ntBASIC2.17□□□□□ -2.06
UBE3BQ7Z3V4 AL356379.1-201ENST00000414105 126 ntBASIC2.17□□□□□ -2.06
UBE3BQ7Z3V4 FTH1P12-201ENST00000432137 551 ntBASIC2.17□□□□□ -2.06
UBE3BQ7Z3V4 RNU6-346P-201ENST00000516288 111 ntBASIC2.17□□□□□ -2.06
UBE3BQ7Z3V4 RNU7-149P-201ENST00000516739 59 ntBASIC2.17□□□□□ -2.06
UBE3BQ7Z3V4 RNU7-28P-201ENST00000516759 62 ntBASIC2.17□□□□□ -2.06
UBE3BQ7Z3V4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.17□□□□□ -2.06
UBE3BQ7Z3V4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.17□□□□□ -2.06
UBE3BQ7Z3V4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
UBE3BQ7Z3V4 MIR613-201ENST00000385248 95 ntBASIC2.16□□□□□ -2.06
UBE3BQ7Z3V4 RNA5SP482-201ENST00000391269 118 ntBASIC2.16□□□□□ -2.06
UBE3BQ7Z3V4 RNU2-40P-201ENST00000410833 196 ntBASIC2.16□□□□□ -2.06
UBE3BQ7Z3V4 RNA5SP501-201ENST00000410990 112 ntBASIC2.16□□□□□ -2.06
UBE3BQ7Z3V4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.16□□□□□ -2.06
UBE3BQ7Z3V4 RNU6-789P-201ENST00000517105 102 ntBASIC2.16□□□□□ -2.06
UBE3BQ7Z3V4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.16□□□□□ -2.06
UBE3BQ7Z3V4 AC008507.4-201ENST00000585464 127 ntBASIC2.16□□□□□ -2.06
UBE3BQ7Z3V4 MIR8054-201ENST00000620877 86 ntBASIC2.16□□□□□ -2.06
UBE3BQ7Z3V4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
UBE3BQ7Z3V4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
UBE3BQ7Z3V4 MIR126-201ENST00000362291 85 ntBASIC2.15□□□□□ -2.07
UBE3BQ7Z3V4 RNU6-597P-201ENST00000365620 102 ntBASIC2.15□□□□□ -2.07
UBE3BQ7Z3V4 Y_RNA.393-201ENST00000383936 102 ntBASIC2.15□□□□□ -2.07
UBE3BQ7Z3V4 RNA5SP450-201ENST00000411206 102 ntBASIC2.15□□□□□ -2.07
UBE3BQ7Z3V4 RN7SL274P-201ENST00000492268 272 ntBASIC2.15□□□□□ -2.07
UBE3BQ7Z3V4 RNA5SP458-201ENST00000516188 119 ntBASIC2.15□□□□□ -2.07
UBE3BQ7Z3V4 SNORA31.10-201ENST00000516482 106 ntBASIC2.15□□□□□ -2.07
UBE3BQ7Z3V4 SNORD116-25-201ENST00000516517 92 ntBASIC2.15□□□□□ -2.07
UBE3BQ7Z3V4 Y_RNA.714-201ENST00000517065 90 ntBASIC2.15□□□□□ -2.07
UBE3BQ7Z3V4 MIR3646-201ENST00000578301 84 ntBASIC2.15□□□□□ -2.07
UBE3BQ7Z3V4 MIR378D2-201ENST00000580636 98 ntBASIC2.15□□□□□ -2.07
UBE3BQ7Z3V4 Pinc.1-201ENST00000616452 154 ntBASIC2.15□□□□□ -2.07
UBE3BQ7Z3V4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 ZNF702P-202ENST00000434269 1966 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 RNU6-457P-201ENST00000363999 107 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 RNU6-151P-201ENST00000364158 107 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 RNU6-704P-201ENST00000364162 103 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 Y_RNA.215-201ENST00000364204 112 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 RNU6-978P-201ENST00000364371 103 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 Y_RNA.242-201ENST00000364473 110 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 Y_RNA.634-201ENST00000364811 113 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 SNORA12.1-201ENST00000390873 148 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 RNU6-440P-201ENST00000390882 105 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 SNORA26-201ENST00000391286 122 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 RNA5SP489-201ENST00000410986 109 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 AC108667.1-201ENST00000428618 249 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 MIR4255-201ENST00000579351 72 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 MIR4287-201ENST00000579398 78 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 MIR3910-1-201ENST00000580936 111 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 AP000942.3-201ENST00000603702 160 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 U1.36-201ENST00000620684 176 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 MIR3658-201ENST00000636291 56 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 AC245060.5-201ENST00000610778 3293 ntBASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
UBE3BQ7Z3V4 RNU6-112P-201ENST00000363599 104 ntBASIC2.13□□□□□ -2.07
UBE3BQ7Z3V4 RNU6-818P-201ENST00000364837 108 ntBASIC2.13□□□□□ -2.07
UBE3BQ7Z3V4 Y_RNA.486-201ENST00000384398 107 ntBASIC2.13□□□□□ -2.07
UBE3BQ7Z3V4 RNU6-296P-201ENST00000384608 107 ntBASIC2.13□□□□□ -2.07
UBE3BQ7Z3V4 RNU6-768P-201ENST00000384683 107 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 408.9 ms