Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 HMGN2P34-201ENST00000437647 269 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 AC233266.1-201ENST00000454518 96 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 RPL39P34-201ENST00000477141 156 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 AC011406.1-201ENST00000512440 370 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 RNA5SP281-201ENST00000516504 135 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 RNU6-94P-201ENST00000607728 107 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 AC242852.1-201ENST00000612151 96 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 AC244015.1-201ENST00000622301 99 ntBASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.66□□□□□ -1.98
CNKSR3Q6P9H4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CNKSR3Q6P9H4 MIR1289-2-201ENST00000408360 111 ntBASIC2.65□□□□□ -1.99
CNKSR3Q6P9H4 RNU6-240P-201ENST00000516098 97 ntBASIC2.65□□□□□ -1.99
CNKSR3Q6P9H4 RNU6-991P-201ENST00000516168 107 ntBASIC2.65□□□□□ -1.99
CNKSR3Q6P9H4 AC015712.3-201ENST00000559380 164 ntBASIC2.65□□□□□ -1.99
CNKSR3Q6P9H4 MIR4658-201ENST00000584344 65 ntBASIC2.65□□□□□ -1.99
CNKSR3Q6P9H4 AC016717.2-201ENST00000609089 5141 ntBASIC2.65□□□□□ -1.99
CNKSR3Q6P9H4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CNKSR3Q6P9H4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 SNORA25B-201ENST00000365507 128 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 MT-TI-201ENST00000387365 69 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 RNU6-440P-201ENST00000390882 105 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 SNORA26.2-201ENST00000390922 122 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 RPS12P2-201ENST00000439728 269 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 SNRPGP13-201ENST00000442212 177 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 RPS26P48-201ENST00000491713 339 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 SNORA4.4-201ENST00000515921 135 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 RNU7-99P-201ENST00000516271 62 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 MIR5197-201ENST00000583721 112 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 AC046143.2-201ENST00000609789 160 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 MIR1291-201ENST00000627649 87 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 U6.108-201ENST00000637764 58 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 AL596211.1-201ENST00000569873 2277 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.64□□□□□ -1.99
CNKSR3Q6P9H4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 RNU1-91P-201ENST00000364746 163 ntBASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 MIR181B1-201ENST00000385240 110 ntBASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 MIR764-201ENST00000390811 85 ntBASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 RNA5SP210-201ENST00000391034 120 ntBASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 RNA5SP467-201ENST00000391274 118 ntBASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 AL591806.2-201ENST00000433122 173 ntBASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 HMGN2P3-201ENST00000433603 273 ntBASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 HMGN2P5-201ENST00000436882 273 ntBASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 AC108210.2-201ENST00000503681 201 ntBASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 MIR5092-201ENST00000583139 88 ntBASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 AL161431.1-201ENST00000618966 4205 ntBASIC2.63□□□□□ -1.99
CNKSR3Q6P9H4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 SNORD114-1-201ENST00000362705 72 ntBASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 snoU2-30.2-201ENST00000362805 70 ntBASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 Y_RNA.198-201ENST00000364013 98 ntBASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 Y_RNA.362-201ENST00000365518 110 ntBASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 SNORA19.1-201ENST00000410656 129 ntBASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 RNU6-109P-201ENST00000516364 107 ntBASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 SNORA40.13-201ENST00000516379 120 ntBASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 RNU6-184P-201ENST00000516514 107 ntBASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 RNU6-667P-201ENST00000517186 102 ntBASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 MIR6079-201ENST00000635807 62 ntBASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 AL589743.1-201ENST00000551932 2712 ntBASIC2.62□□□□□ -1.99
CNKSR3Q6P9H4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.61□□□□□ -1.99
CNKSR3Q6P9H4 MIR126-201ENST00000362291 85 ntBASIC2.61□□□□□ -1.99
CNKSR3Q6P9H4 Y_RNA.49-201ENST00000362714 112 ntBASIC2.61□□□□□ -1.99
CNKSR3Q6P9H4 Y_RNA.267-201ENST00000364679 109 ntBASIC2.61□□□□□ -1.99
CNKSR3Q6P9H4 MIR590-201ENST00000385008 97 ntBASIC2.61□□□□□ -1.99
CNKSR3Q6P9H4 AC018868.1-201ENST00000491307 315 ntBASIC2.61□□□□□ -1.99
CNKSR3Q6P9H4 AC026436.1-201ENST00000510537 270 ntBASIC2.61□□□□□ -1.99
CNKSR3Q6P9H4 RNU6-830P-201ENST00000516353 107 ntBASIC2.61□□□□□ -1.99
CNKSR3Q6P9H4 RNY4P20-201ENST00000516678 93 ntBASIC2.61□□□□□ -1.99
CNKSR3Q6P9H4 RNU6-341P-201ENST00000516973 96 ntBASIC2.61□□□□□ -1.99
CNKSR3Q6P9H4 AC007229.1-201ENST00000590455 412 ntBASIC2.61□□□□□ -1.99
CNKSR3Q6P9H4 AC018630.2-201ENST00000534866 2403 ntBASIC2.61□□□□□ -1.99
CNKSR3Q6P9H4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CNKSR3Q6P9H4 ZNF271P-202ENST00000465539 1970 ntBASIC2.6□□□□□ -1.99
CNKSR3Q6P9H4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CNKSR3Q6P9H4 SNORA33-201ENST00000363664 130 ntBASIC2.6□□□□□ -1.99
CNKSR3Q6P9H4 Y_RNA.558-201ENST00000384685 113 ntBASIC2.6□□□□□ -1.99
CNKSR3Q6P9H4 RNY1P7-201ENST00000384743 110 ntBASIC2.6□□□□□ -1.99
CNKSR3Q6P9H4 MIR522-201ENST00000385071 87 ntBASIC2.6□□□□□ -1.99
CNKSR3Q6P9H4 RNU6-482P-201ENST00000391068 107 ntBASIC2.6□□□□□ -1.99
CNKSR3Q6P9H4 RPS15AP28-201ENST00000435088 386 ntBASIC2.6□□□□□ -1.99
CNKSR3Q6P9H4 MIR338-201ENST00000636369 67 ntBASIC2.6□□□□□ -1.99
CNKSR3Q6P9H4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CNKSR3Q6P9H4 RNU6-349P-201ENST00000362402 107 ntBASIC2.59□□□□□ -1.99
CNKSR3Q6P9H4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.59□□□□□ -1.99
CNKSR3Q6P9H4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.59□□□□□ -1.99
CNKSR3Q6P9H4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.59□□□□□ -1.99
CNKSR3Q6P9H4 MIR5009-201ENST00000578736 100 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms