Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CDPF1Q6NVV7 SNORD77B-201ENST00000391112 67 ntBASIC2.6□□□□□ -1.99
CDPF1Q6NVV7 SNORA7.5-201ENST00000410672 110 ntBASIC2.6□□□□□ -1.99
CDPF1Q6NVV7 UBBP3-201ENST00000445497 241 ntBASIC2.6□□□□□ -1.99
CDPF1Q6NVV7 RN7SL323P-201ENST00000494712 295 ntBASIC2.6□□□□□ -1.99
CDPF1Q6NVV7 RNU2-13P-201ENST00000515909 113 ntBASIC2.6□□□□□ -1.99
CDPF1Q6NVV7 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.6□□□□□ -1.99
CDPF1Q6NVV7 RNA5SP168-201ENST00000516642 112 ntBASIC2.6□□□□□ -1.99
CDPF1Q6NVV7 AC026403.1-201ENST00000518938 295 ntBASIC2.6□□□□□ -1.99
CDPF1Q6NVV7 MIR6841-201ENST00000637129 72 ntBASIC2.6□□□□□ -1.99
CDPF1Q6NVV7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDPF1Q6NVV7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 SNORA63.1-201ENST00000362493 131 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 RNU6-228P-201ENST00000362700 106 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 SNORA22.1-201ENST00000362701 134 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 SNORD115-3-201ENST00000363100 82 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 Y_RNA.370-201ENST00000365589 108 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 RNU6-1124P-201ENST00000384169 107 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 RNA5SP261-201ENST00000410536 106 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 RN7SKP192-201ENST00000411291 327 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 RPL23AP83-201ENST00000434984 473 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 HSPE1P9-201ENST00000440046 311 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 RNA5SP395-201ENST00000516567 118 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 RNU7-53P-201ENST00000516705 60 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 MIR548Z-201ENST00000584743 97 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 AC103810.6-201ENST00000606708 136 ntBASIC2.59□□□□□ -1.99
CDPF1Q6NVV7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CDPF1Q6NVV7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CDPF1Q6NVV7 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.58□□□□□ -2
CDPF1Q6NVV7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CDPF1Q6NVV7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CDPF1Q6NVV7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.58□□□□□ -2
CDPF1Q6NVV7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CDPF1Q6NVV7 RNA5SP119-201ENST00000362715 117 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 Y_RNA.95-201ENST00000363079 95 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 RNA5SP72-201ENST00000364442 117 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 Y_RNA.430-201ENST00000384081 110 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 RNU6-1201P-201ENST00000384227 107 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 RNU6-675P-201ENST00000384236 104 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 Y_RNA.470-201ENST00000384307 117 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 RNU6-616P-201ENST00000384353 107 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 SNORA46-201ENST00000384762 135 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 MIR452-201ENST00000385020 85 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC2.58□□□□□ -2
CDPF1Q6NVV7 MIR887-201ENST00000401258 79 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 AC092427.1-202ENST00000430569 476 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 RNU7-12P-201ENST00000516030 62 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 RNA5SP33-201ENST00000516687 98 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 MIR5094-201ENST00000578766 85 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 MIR548AE2-201ENST00000583456 67 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 AC091304.10-201ENST00000641554 121 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CDPF1Q6NVV7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.58□□□□□ -2
CDPF1Q6NVV7 AC096644.4-201ENST00000563417 2912 ntBASIC2.58□□□□□ -2
CDPF1Q6NVV7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
CDPF1Q6NVV7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CDPF1Q6NVV7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CDPF1Q6NVV7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.57□□□□□ -2
CDPF1Q6NVV7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CDPF1Q6NVV7 SNORA24-201ENST00000384096 131 ntBASIC2.57□□□□□ -2
CDPF1Q6NVV7 RNU6-242P-201ENST00000384359 107 ntBASIC2.57□□□□□ -2
CDPF1Q6NVV7 SNORA26.6-201ENST00000391256 115 ntBASIC2.57□□□□□ -2
CDPF1Q6NVV7 BTF3P4-201ENST00000418852 495 ntBASIC2.57□□□□□ -2
CDPF1Q6NVV7 UQCRHP3-201ENST00000451503 251 ntBASIC2.57□□□□□ -2
CDPF1Q6NVV7 RPL39P39-201ENST00000455840 151 ntBASIC2.57□□□□□ -2
CDPF1Q6NVV7 MIR1270-201ENST00000459320 83 ntBASIC2.57□□□□□ -2
CDPF1Q6NVV7 Y_RNA.705-201ENST00000516862 110 ntBASIC2.57□□□□□ -2
CDPF1Q6NVV7 RNU6-958P-201ENST00000516995 106 ntBASIC2.57□□□□□ -2
CDPF1Q6NVV7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.57□□□□□ -2
CDPF1Q6NVV7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.57□□□□□ -2
CDPF1Q6NVV7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.57□□□□□ -2
CDPF1Q6NVV7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.57□□□□□ -2
CDPF1Q6NVV7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.57□□□□□ -2
CDPF1Q6NVV7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
CDPF1Q6NVV7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.56□□□□□ -2
CDPF1Q6NVV7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.56□□□□□ -2
CDPF1Q6NVV7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CDPF1Q6NVV7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.56□□□□□ -2
CDPF1Q6NVV7 SNORA71.3-201ENST00000362582 128 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 SNORA70.4-201ENST00000365509 134 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 SNORD116-22-201ENST00000384430 92 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 MIR136-201ENST00000385207 82 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 MIR199A2-201ENST00000385289 110 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 BX510359.4-201ENST00000423750 193 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.56□□□□□ -2
CDPF1Q6NVV7 PRSS3P4-201ENST00000453323 162 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 RPS29P29-201ENST00000456396 171 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 RNU7-67P-201ENST00000459003 62 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 RNA5SP367-201ENST00000516557 118 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 RNU6-521P-201ENST00000516663 105 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 AC087499.8-201ENST00000578406 226 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 AC091167.4-201ENST00000605079 184 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 AC012314.7-201ENST00000619693 93 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 AC073476.4-201ENST00000628409 72 ntBASIC2.56□□□□□ -2
CDPF1Q6NVV7 RNU6-1276P-201ENST00000365372 104 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 RNU1-109P-201ENST00000383960 147 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 SNORA5A-201ENST00000384111 134 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 RNU6-1031P-201ENST00000384773 107 ntBASIC2.55□□□□□ -2
CDPF1Q6NVV7 MIR30B-201ENST00000384850 88 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms