Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RC3H1Q5TC82 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RC3H1Q5TC82 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
RC3H1Q5TC82 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RC3H1Q5TC82 SNORD68-201ENST00000363214 84 ntBASIC3.66□□□□□ -1.82
RC3H1Q5TC82 Y_RNA.377-201ENST00000365644 108 ntBASIC3.66□□□□□ -1.82
RC3H1Q5TC82 MIR196B-201ENST00000384852 84 ntBASIC3.66□□□□□ -1.82
RC3H1Q5TC82 RNU6-679P-201ENST00000391003 106 ntBASIC3.66□□□□□ -1.82
RC3H1Q5TC82 AC009969.1-201ENST00000438726 172 ntBASIC3.66□□□□□ -1.82
RC3H1Q5TC82 RNU1-41P-201ENST00000516161 162 ntBASIC3.66□□□□□ -1.82
RC3H1Q5TC82 RNU1-48P-201ENST00000516400 162 ntBASIC3.66□□□□□ -1.82
RC3H1Q5TC82 U6.108-201ENST00000637764 58 ntBASIC3.66□□□□□ -1.82
RC3H1Q5TC82 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RC3H1Q5TC82 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
RC3H1Q5TC82 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
RC3H1Q5TC82 AL022718.1-201ENST00000412004 84 ntBASIC3.65□□□□□ -1.83
RC3H1Q5TC82 RNA5SP217-201ENST00000515959 91 ntBASIC3.65□□□□□ -1.83
RC3H1Q5TC82 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RC3H1Q5TC82 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RC3H1Q5TC82 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RC3H1Q5TC82 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RC3H1Q5TC82 MIR342-201ENST00000362212 99 ntBASIC3.64□□□□□ -1.83
RC3H1Q5TC82 U8.5-201ENST00000364528 136 ntBASIC3.64□□□□□ -1.83
RC3H1Q5TC82 snoU2-30.1-201ENST00000365012 70 ntBASIC3.64□□□□□ -1.83
RC3H1Q5TC82 Y_RNA.467-201ENST00000384297 102 ntBASIC3.64□□□□□ -1.83
RC3H1Q5TC82 SNORA67.4-201ENST00000384688 142 ntBASIC3.64□□□□□ -1.83
RC3H1Q5TC82 SNORA7.5-201ENST00000410672 110 ntBASIC3.64□□□□□ -1.83
RC3H1Q5TC82 RNA5SP508-201ENST00000411327 119 ntBASIC3.64□□□□□ -1.83
RC3H1Q5TC82 SNX2P2-201ENST00000424553 323 ntBASIC3.64□□□□□ -1.83
RC3H1Q5TC82 RPL23AP63-201ENST00000498752 471 ntBASIC3.64□□□□□ -1.83
RC3H1Q5TC82 RNU1-142P-201ENST00000516682 145 ntBASIC3.64□□□□□ -1.83
RC3H1Q5TC82 AC006160.2-201ENST00000637708 154 ntBASIC3.64□□□□□ -1.83
RC3H1Q5TC82 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RC3H1Q5TC82 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RC3H1Q5TC82 RNU1-112P-201ENST00000364401 164 ntBASIC3.63□□□□□ -1.83
RC3H1Q5TC82 Y_RNA.299-201ENST00000364973 94 ntBASIC3.63□□□□□ -1.83
RC3H1Q5TC82 Y_RNA.336-201ENST00000365307 109 ntBASIC3.63□□□□□ -1.83
RC3H1Q5TC82 RNU6-652P-201ENST00000365488 107 ntBASIC3.63□□□□□ -1.83
RC3H1Q5TC82 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RC3H1Q5TC82 AL138827.1-201ENST00000402666 306 ntBASIC3.63□□□□□ -1.83
RC3H1Q5TC82 AL035398.1-201ENST00000430869 322 ntBASIC3.63□□□□□ -1.83
RC3H1Q5TC82 AL513328.1-201ENST00000446460 224 ntBASIC3.63□□□□□ -1.83
RC3H1Q5TC82 Y_RNA.659-201ENST00000515994 113 ntBASIC3.63□□□□□ -1.83
RC3H1Q5TC82 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.63□□□□□ -1.83
RC3H1Q5TC82 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RC3H1Q5TC82 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RC3H1Q5TC82 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RC3H1Q5TC82 AC092435.3-201ENST00000565538 3654 ntBASIC3.63□□□□□ -1.83
RC3H1Q5TC82 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
RC3H1Q5TC82 RNU6-859P-201ENST00000362728 107 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 SNORD38C-201ENST00000384381 69 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 RNY1P4-201ENST00000384595 115 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 RNA5SP274-201ENST00000410484 108 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 Y_RNA.611-201ENST00000410682 108 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 RNA5SP21-201ENST00000410917 96 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 RPL32P35-201ENST00000415214 394 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.62□□□□□ -1.83
RC3H1Q5TC82 AL031183.1-201ENST00000457667 207 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 TRBV12-1-201ENST00000479785 344 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 SCARNA17.1-201ENST00000516211 143 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 SCARNA17.2-201ENST00000516334 143 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 SNORD45.4-201ENST00000516629 73 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 AC104027.1-201ENST00000521887 300 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 SCARNA17.4-201ENST00000614296 143 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 MIR338-201ENST00000636369 67 ntBASIC3.62□□□□□ -1.83
RC3H1Q5TC82 AC008264.2-201ENST00000610193 3731 ntBASIC3.61□□□□□ -1.83
RC3H1Q5TC82 CD24P4-201ENST00000382840 243 ntBASIC3.61□□□□□ -1.83
RC3H1Q5TC82 RNU6-1201P-201ENST00000384227 107 ntBASIC3.61□□□□□ -1.83
RC3H1Q5TC82 RNU2-40P-201ENST00000410833 196 ntBASIC3.61□□□□□ -1.83
RC3H1Q5TC82 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.61□□□□□ -1.83
RC3H1Q5TC82 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.61□□□□□ -1.83
RC3H1Q5TC82 RNU7-94P-201ENST00000459576 63 ntBASIC3.61□□□□□ -1.83
RC3H1Q5TC82 RNU6-991P-201ENST00000516168 107 ntBASIC3.61□□□□□ -1.83
RC3H1Q5TC82 RNA5SP380-201ENST00000517190 98 ntBASIC3.61□□□□□ -1.83
RC3H1Q5TC82 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RC3H1Q5TC82 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RC3H1Q5TC82 Y_RNA.4-201ENST00000362333 112 ntBASIC3.6□□□□□ -1.83
RC3H1Q5TC82 RNA5SP68-201ENST00000363885 119 ntBASIC3.6□□□□□ -1.83
RC3H1Q5TC82 RNA5SP293-201ENST00000410527 113 ntBASIC3.6□□□□□ -1.83
RC3H1Q5TC82 RNU4-69P-201ENST00000410677 143 ntBASIC3.6□□□□□ -1.83
RC3H1Q5TC82 SNORA31.4-201ENST00000516049 129 ntBASIC3.6□□□□□ -1.83
RC3H1Q5TC82 RNU6-1041P-201ENST00000516254 102 ntBASIC3.6□□□□□ -1.83
RC3H1Q5TC82 AC021613.1-201ENST00000623880 111 ntBASIC3.6□□□□□ -1.83
RC3H1Q5TC82 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RC3H1Q5TC82 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RC3H1Q5TC82 SNORD116-10-201ENST00000363791 102 ntBASIC3.59□□□□□ -1.83
RC3H1Q5TC82 SNORA80E-201ENST00000384744 137 ntBASIC3.59□□□□□ -1.83
RC3H1Q5TC82 AC009414.1-201ENST00000427200 443 ntBASIC3.59□□□□□ -1.83
RC3H1Q5TC82 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.59□□□□□ -1.83
RC3H1Q5TC82 SNORD58A-201ENST00000383875 65 ntBASIC3.58□□□□□ -1.84
RC3H1Q5TC82 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC3.58□□□□□ -1.84
RC3H1Q5TC82 POLR2J4-204ENST00000418424 324 ntBASIC3.58□□□□□ -1.84
RC3H1Q5TC82 AL161788.1-201ENST00000441805 169 ntBASIC3.58□□□□□ -1.84
RC3H1Q5TC82 RPS27P29-201ENST00000463110 252 ntBASIC3.58□□□□□ -1.84
RC3H1Q5TC82 AL353149.1-201ENST00000610667 244 ntBASIC3.58□□□□□ -1.84
RC3H1Q5TC82 MIR548BB-201ENST00000626714 66 ntBASIC3.58□□□□□ -1.84
RC3H1Q5TC82 MIR7153-201ENST00000637758 57 ntBASIC3.58□□□□□ -1.84
RC3H1Q5TC82 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RC3H1Q5TC82 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RC3H1Q5TC82 AC091564.4-201ENST00000533934 2194 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms