Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 SNORD115-15-201ENST00000364809 81 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-1-201ENST00000364961 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-26-201ENST00000365067 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-10-201ENST00000365073 81 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-43-201ENST00000365503 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-36-201ENST00000365629 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 RNU1-109P-201ENST00000383960 147 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 Y_RNA.494-201ENST00000384432 111 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 MIR516B2-201ENST00000385190 85 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORA48.1-201ENST00000390879 135 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORA26.2-201ENST00000390922 122 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORA48.2-201ENST00000390926 124 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 HMGN2P39-201ENST00000398005 273 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 MIR887-201ENST00000401258 79 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 RNU7-96P-201ENST00000459535 64 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 RPL23AP63-201ENST00000498752 471 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 AC090821.2-201ENST00000523552 176 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 MIR4325-201ENST00000583049 90 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 SNORD115-40-201ENST00000606510 82 ntBASIC3.26□□□□□ -1.89
TMEM259Q4ZIN3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM259Q4ZIN3 RNU6-766P-201ENST00000362478 107 ntBASIC3.25□□□□□ -1.89
TMEM259Q4ZIN3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMEM259Q4ZIN3 RNU6-1104P-201ENST00000384723 104 ntBASIC3.25□□□□□ -1.89
TMEM259Q4ZIN3 MT-TI-201ENST00000387365 69 ntBASIC3.25□□□□□ -1.89
TMEM259Q4ZIN3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TMEM259Q4ZIN3 RNA5SP229-201ENST00000410809 99 ntBASIC3.25□□□□□ -1.89
TMEM259Q4ZIN3 AC093850.1-201ENST00000454121 251 ntBASIC3.25□□□□□ -1.89
TMEM259Q4ZIN3 RNU6-998P-201ENST00000515894 101 ntBASIC3.25□□□□□ -1.89
TMEM259Q4ZIN3 AC022523.2-201ENST00000561045 150 ntBASIC3.25□□□□□ -1.89
TMEM259Q4ZIN3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.25□□□□□ -1.89
TMEM259Q4ZIN3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 MIR128-1-201ENST00000384921 82 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 MIR452-201ENST00000385020 85 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 RNA5SP501-201ENST00000410990 112 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 RNA5SP270-201ENST00000411361 118 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 UBL5P3-201ENST00000475112 231 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 RNU2-35P-201ENST00000516446 142 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 RNA5SP281-201ENST00000516504 135 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 SUB1P4-201ENST00000566062 339 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 MIR4709-201ENST00000577272 72 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 MIR2682-201ENST00000580305 110 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 MIR3163-201ENST00000581592 73 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 uc_338.1-201ENST00000612113 180 ntBASIC3.24□□□□□ -1.89
TMEM259Q4ZIN3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.23□□□□□ -1.89
TMEM259Q4ZIN3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMEM259Q4ZIN3 SNORA1.2-201ENST00000365189 134 ntBASIC3.23□□□□□ -1.89
TMEM259Q4ZIN3 RNU6-1113P-201ENST00000384348 107 ntBASIC3.23□□□□□ -1.89
TMEM259Q4ZIN3 RN7SL75P-201ENST00000461926 281 ntBASIC3.23□□□□□ -1.89
TMEM259Q4ZIN3 RN7SL863P-201ENST00000462370 296 ntBASIC3.23□□□□□ -1.89
TMEM259Q4ZIN3 SCARNA16.3-201ENST00000516595 184 ntBASIC3.23□□□□□ -1.89
TMEM259Q4ZIN3 RNA5SP437-201ENST00000517249 129 ntBASIC3.23□□□□□ -1.89
TMEM259Q4ZIN3 ZNF861P-201ENST00000588126 639 ntBASIC3.23□□□□□ -1.89
TMEM259Q4ZIN3 AC062037.1-201ENST00000605302 128 ntBASIC3.23□□□□□ -1.89
TMEM259Q4ZIN3 AC007336.1-201ENST00000576365 3828 ntBASIC3.23□□□□□ -1.89
TMEM259Q4ZIN3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TMEM259Q4ZIN3 Y_RNA.323-201ENST00000365157 109 ntBASIC3.22□□□□□ -1.89
TMEM259Q4ZIN3 MIR136-201ENST00000385207 82 ntBASIC3.22□□□□□ -1.89
TMEM259Q4ZIN3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.22□□□□□ -1.89
TMEM259Q4ZIN3 RNU2-11P-201ENST00000459191 187 ntBASIC3.22□□□□□ -1.89
TMEM259Q4ZIN3 RNU7-6P-201ENST00000516845 62 ntBASIC3.22□□□□□ -1.89
TMEM259Q4ZIN3 RNU6-94P-201ENST00000607728 107 ntBASIC3.22□□□□□ -1.89
TMEM259Q4ZIN3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.22□□□□□ -1.89
TMEM259Q4ZIN3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TMEM259Q4ZIN3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
TMEM259Q4ZIN3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
TMEM259Q4ZIN3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 RNU6-112P-201ENST00000363599 104 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 Y_RNA.370-201ENST00000365589 108 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 SNORA7.4-201ENST00000384249 137 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 MIR548D2-201ENST00000384955 97 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 MIR590-201ENST00000385008 97 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 AC105272.1-201ENST00000438604 198 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 RN7SKP43-201ENST00000516173 320 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 RNU1-143P-201ENST00000516296 146 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 RNA5SP481-201ENST00000516814 122 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 AC068339.1-201ENST00000526965 141 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 U1.23-201ENST00000610293 146 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 RNU1-68P-201ENST00000615382 146 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 U1.39-201ENST00000621562 146 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TMEM259Q4ZIN3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TMEM259Q4ZIN3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.2□□□□□ -1.9
TMEM259Q4ZIN3 RNA5SP173-201ENST00000364857 136 ntBASIC3.2□□□□□ -1.9
TMEM259Q4ZIN3 RNU6-573P-201ENST00000383938 106 ntBASIC3.2□□□□□ -1.9
TMEM259Q4ZIN3 AL022718.1-201ENST00000412004 84 ntBASIC3.2□□□□□ -1.9
TMEM259Q4ZIN3 RPL32P35-201ENST00000415214 394 ntBASIC3.2□□□□□ -1.9
TMEM259Q4ZIN3 S100A11P2-201ENST00000467589 312 ntBASIC3.2□□□□□ -1.9
TMEM259Q4ZIN3 MIR5009-201ENST00000578736 100 ntBASIC3.2□□□□□ -1.9
TMEM259Q4ZIN3 AC006023.1-201ENST00000603944 259 ntBASIC3.2□□□□□ -1.9
TMEM259Q4ZIN3 AC021613.1-201ENST00000623880 111 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms