Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL357552.1-201ENST00000445254 415 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 SNORD109B-201ENST00000458961 67 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 SNORD109A-201ENST00000459128 67 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 SNORA70.19-201ENST00000516717 90 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 AP002004.2-201ENST00000531656 154 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 AC015712.3-201ENST00000559380 164 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 AC103810.1-201ENST00000579873 453 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 SNORD53-201ENST00000579969 78 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 AL353149.1-201ENST00000610667 244 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3□□□□□ -1.93
RSPO4Q2I0M5 MIR6076-201ENST00000617521 113 ntBASIC3□□□□□ -1.93
RSPO4Q2I0M5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3□□□□□ -1.93
RSPO4Q2I0M5 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 MIR423-201ENST00000362201 94 ntBASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 U8.5-201ENST00000364528 136 ntBASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 Y_RNA.336-201ENST00000365307 109 ntBASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 Y_RNA.470-201ENST00000384307 117 ntBASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 MIR184-201ENST00000384962 84 ntBASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 RNU6-129P-201ENST00000391022 107 ntBASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 AC087499.2-201ENST00000432861 149 ntBASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 RNU7-96P-201ENST00000459535 64 ntBASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 uc_338.25-201ENST00000613756 156 ntBASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 AC002076.2-201ENST00000617362 122 ntBASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 SEPT14P17-201ENST00000617978 177 ntBASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 MIR1248-201ENST00000629190 106 ntBASIC2.99□□□□□ -1.93
RSPO4Q2I0M5 MAPK10-373ENST00000641983 6772 ntBASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 RNU4-37P-201ENST00000410214 84 ntBASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 AL445685.2-201ENST00000422551 342 ntBASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 AC108210.2-201ENST00000503681 201 ntBASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 UBL5P1-201ENST00000507979 193 ntBASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 SNORD45.4-201ENST00000516629 73 ntBASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 RNA5SP33-201ENST00000516687 98 ntBASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 RNU6-965P-201ENST00000516721 96 ntBASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 DEFB122-202ENST00000569013 197 ntBASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 ZNF861P-201ENST00000588126 639 ntBASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
RSPO4Q2I0M5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 snoU2-30.2-201ENST00000362805 70 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 Y_RNA.57-201ENST00000362806 113 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 RNU6-1244P-201ENST00000363614 108 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 RNU6-478P-201ENST00000363904 110 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 Y_RNA.241-201ENST00000364470 117 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 SNORD67-201ENST00000390833 111 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 RNU6-482P-201ENST00000391068 107 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 SNORA40.18-201ENST00000391200 128 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 RNA5SP467-201ENST00000391274 118 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 Z98941.1-201ENST00000407764 100 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 RNU6-613P-201ENST00000410412 108 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 SNORA70.14-201ENST00000516205 110 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 RNU6-548P-201ENST00000517083 115 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 AP000867.2-201ENST00000532468 320 ntBASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RSPO4Q2I0M5 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
RSPO4Q2I0M5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RSPO4Q2I0M5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
RSPO4Q2I0M5 SNORD38.1-201ENST00000363863 68 ntBASIC2.96□□□□□ -1.94
RSPO4Q2I0M5 SNORA80E-201ENST00000384744 137 ntBASIC2.96□□□□□ -1.94
RSPO4Q2I0M5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.96□□□□□ -1.94
RSPO4Q2I0M5 RNU6-991P-201ENST00000516168 107 ntBASIC2.96□□□□□ -1.94
RSPO4Q2I0M5 U6.108-201ENST00000637764 58 ntBASIC2.96□□□□□ -1.94
RSPO4Q2I0M5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.96□□□□□ -1.94
RSPO4Q2I0M5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.96□□□□□ -1.94
RSPO4Q2I0M5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
RSPO4Q2I0M5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
RSPO4Q2I0M5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RSPO4Q2I0M5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 RNU6-871P-201ENST00000516122 100 ntBASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 RNU6-586P-201ENST00000517265 104 ntBASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 MIR4474-201ENST00000579189 78 ntBASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 MIR3134-201ENST00000579433 74 ntBASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 MIR4765-201ENST00000585007 77 ntBASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
RSPO4Q2I0M5 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RSPO4Q2I0M5 AP001486.2-201ENST00000561652 5113 ntBASIC2.94□□□□□ -1.94
RSPO4Q2I0M5 AP006437.1-201ENST00000641440 3685 ntBASIC2.94□□□□□ -1.94
RSPO4Q2I0M5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
RSPO4Q2I0M5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RSPO4Q2I0M5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RSPO4Q2I0M5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.94□□□□□ -1.94
RSPO4Q2I0M5 RNU6-1319P-201ENST00000390855 104 ntBASIC2.94□□□□□ -1.94
RSPO4Q2I0M5 RNU6-747P-201ENST00000390928 104 ntBASIC2.94□□□□□ -1.94
RSPO4Q2I0M5 RNU6-241P-201ENST00000391148 104 ntBASIC2.94□□□□□ -1.94
RSPO4Q2I0M5 RNU6-177P-201ENST00000411257 104 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms