Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
XPCQ01831 U8.5-201ENST00000364528 136 ntBASIC2.85□□□□□ -1.95
XPCQ01831 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
XPCQ01831 SNORD37.2-201ENST00000391075 66 ntBASIC2.85□□□□□ -1.95
XPCQ01831 SNORD23.1-201ENST00000408212 104 ntBASIC2.85□□□□□ -1.95
XPCQ01831 MIR4529-201ENST00000578110 78 ntBASIC2.85□□□□□ -1.95
XPCQ01831 AC120024.3-201ENST00000603167 156 ntBASIC2.85□□□□□ -1.95
XPCQ01831 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.85□□□□□ -1.95
XPCQ01831 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.85□□□□□ -1.95
XPCQ01831 RNU6-199P-201ENST00000362954 107 ntBASIC2.84□□□□□ -1.95
XPCQ01831 RNU6-457P-201ENST00000363999 107 ntBASIC2.84□□□□□ -1.95
XPCQ01831 RNU6-978P-201ENST00000364371 103 ntBASIC2.84□□□□□ -1.95
XPCQ01831 RNU6-597P-201ENST00000365620 102 ntBASIC2.84□□□□□ -1.95
XPCQ01831 MIR520A-201ENST00000384862 85 ntBASIC2.84□□□□□ -1.95
XPCQ01831 AC003989.2-201ENST00000440224 169 ntBASIC2.84□□□□□ -1.95
XPCQ01831 STAG3L5P-204ENST00000443759 179 ntBASIC2.84□□□□□ -1.95
XPCQ01831 TMSB4XP3-201ENST00000445144 114 ntBASIC2.84□□□□□ -1.95
XPCQ01831 RNU6-365P-201ENST00000517113 106 ntBASIC2.84□□□□□ -1.95
XPCQ01831 AC078899.2-201ENST00000595282 212 ntBASIC2.84□□□□□ -1.95
XPCQ01831 AP001485.1-201ENST00000604799 199 ntBASIC2.84□□□□□ -1.95
XPCQ01831 U1.36-201ENST00000620684 176 ntBASIC2.84□□□□□ -1.95
XPCQ01831 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.84□□□□□ -1.96
XPCQ01831 SNORD50B-201ENST00000364995 70 ntBASIC2.83□□□□□ -1.96
XPCQ01831 SNORA4.2-201ENST00000365313 147 ntBASIC2.83□□□□□ -1.96
XPCQ01831 MIR569-201ENST00000385228 96 ntBASIC2.83□□□□□ -1.96
XPCQ01831 MIR513C-201ENST00000401352 84 ntBASIC2.83□□□□□ -1.96
XPCQ01831 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.83□□□□□ -1.96
XPCQ01831 HSPE1P9-201ENST00000440046 311 ntBASIC2.83□□□□□ -1.96
XPCQ01831 AC112693.2-201ENST00000556538 232 ntBASIC2.83□□□□□ -1.96
XPCQ01831 SNORA28-201ENST00000606769 126 ntBASIC2.83□□□□□ -1.96
XPCQ01831 snoU13.31-201ENST00000607291 104 ntBASIC2.83□□□□□ -1.96
XPCQ01831 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.83□□□□□ -1.96
XPCQ01831 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
XPCQ01831 ZNF720P1-201ENST00000562403 1939 ntBASIC2.82□□□□□ -1.96
XPCQ01831 RNU6-1084P-201ENST00000362498 107 ntBASIC2.82□□□□□ -1.96
XPCQ01831 RNU6-112P-201ENST00000363599 104 ntBASIC2.82□□□□□ -1.96
XPCQ01831 Y_RNA.497-201ENST00000384447 98 ntBASIC2.82□□□□□ -1.96
XPCQ01831 RNU6-296P-201ENST00000384608 107 ntBASIC2.82□□□□□ -1.96
XPCQ01831 Y_RNA.568-201ENST00000384742 113 ntBASIC2.82□□□□□ -1.96
XPCQ01831 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.82□□□□□ -1.96
XPCQ01831 RN7SKP200-201ENST00000410564 320 ntBASIC2.82□□□□□ -1.96
XPCQ01831 RNU2-7P-201ENST00000410794 178 ntBASIC2.82□□□□□ -1.96
XPCQ01831 AL158823.1-201ENST00000418441 478 ntBASIC2.82□□□□□ -1.96
XPCQ01831 SNORA25.12-201ENST00000516202 82 ntBASIC2.82□□□□□ -1.96
XPCQ01831 RNU6-426P-201ENST00000516464 97 ntBASIC2.82□□□□□ -1.96
XPCQ01831 AL157777.2-201ENST00000258070 137 ntBASIC2.81□□□□□ -1.96
XPCQ01831 Y_RNA.242-201ENST00000364473 110 ntBASIC2.81□□□□□ -1.96
XPCQ01831 RNU6-950P-201ENST00000384651 107 ntBASIC2.81□□□□□ -1.96
XPCQ01831 RNU6-588P-201ENST00000410281 105 ntBASIC2.81□□□□□ -1.96
XPCQ01831 RNA5SP82-201ENST00000516707 92 ntBASIC2.81□□□□□ -1.96
XPCQ01831 RNA5SP437-201ENST00000517249 129 ntBASIC2.81□□□□□ -1.96
XPCQ01831 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.81□□□□□ -1.96
XPCQ01831 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
XPCQ01831 Y_RNA.66-201ENST00000362862 102 ntBASIC2.8□□□□□ -1.96
XPCQ01831 RNU6-1082P-201ENST00000364574 107 ntBASIC2.8□□□□□ -1.96
XPCQ01831 SNORA75.5-201ENST00000391291 81 ntBASIC2.8□□□□□ -1.96
XPCQ01831 RPL30P13-201ENST00000418873 348 ntBASIC2.8□□□□□ -1.96
XPCQ01831 SNORD13-201ENST00000459299 104 ntBASIC2.8□□□□□ -1.96
XPCQ01831 RNA5SP272-201ENST00000516095 111 ntBASIC2.8□□□□□ -1.96
XPCQ01831 AC132825.6-201ENST00000638861 357 ntBASIC2.8□□□□□ -1.96
XPCQ01831 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
XPCQ01831 MIR378A-201ENST00000362177 66 ntBASIC2.79□□□□□ -1.96
XPCQ01831 SNORA25.7-201ENST00000364375 127 ntBASIC2.79□□□□□ -1.96
XPCQ01831 snoU2-30.1-201ENST00000365012 70 ntBASIC2.79□□□□□ -1.96
XPCQ01831 SNORA6-201ENST00000384033 151 ntBASIC2.79□□□□□ -1.96
XPCQ01831 MIR802-201ENST00000390235 94 ntBASIC2.79□□□□□ -1.96
XPCQ01831 BTF3P4-201ENST00000418852 495 ntBASIC2.79□□□□□ -1.96
XPCQ01831 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.79□□□□□ -1.96
XPCQ01831 RNU6-504P-201ENST00000516568 104 ntBASIC2.79□□□□□ -1.96
XPCQ01831 SNORD45.4-201ENST00000516629 73 ntBASIC2.79□□□□□ -1.96
XPCQ01831 RNU2-19P-201ENST00000517288 84 ntBASIC2.79□□□□□ -1.96
XPCQ01831 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
XPCQ01831 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
XPCQ01831 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
XPCQ01831 SNORD14E-201ENST00000364009 85 ntBASIC2.78□□□□□ -1.96
XPCQ01831 RNU6-1336P-201ENST00000383886 109 ntBASIC2.78□□□□□ -1.96
XPCQ01831 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
XPCQ01831 AL034345.1-201ENST00000407768 123 ntBASIC2.78□□□□□ -1.96
XPCQ01831 RNA5SP100-201ENST00000410903 110 ntBASIC2.78□□□□□ -1.96
XPCQ01831 RNU6-321P-201ENST00000410912 106 ntBASIC2.78□□□□□ -1.96
XPCQ01831 RNA5SP59-201ENST00000410922 110 ntBASIC2.78□□□□□ -1.96
XPCQ01831 AL445685.2-201ENST00000422551 342 ntBASIC2.78□□□□□ -1.96
XPCQ01831 Y_RNA.666-201ENST00000516187 112 ntBASIC2.78□□□□□ -1.96
XPCQ01831 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.78□□□□□ -1.96
XPCQ01831 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.78□□□□□ -1.96
XPCQ01831 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.78□□□□□ -1.96
XPCQ01831 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
XPCQ01831 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
XPCQ01831 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
XPCQ01831 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
XPCQ01831 Y_RNA.355-201ENST00000365462 98 ntBASIC2.77□□□□□ -1.97
XPCQ01831 Y_RNA.508-201ENST00000384502 114 ntBASIC2.77□□□□□ -1.97
XPCQ01831 SNORA19-201ENST00000384737 128 ntBASIC2.77□□□□□ -1.97
XPCQ01831 AC019129.1-201ENST00000403786 261 ntBASIC2.77□□□□□ -1.97
XPCQ01831 RNU7-197P-201ENST00000458836 62 ntBASIC2.77□□□□□ -1.97
XPCQ01831 AC055731.1-201ENST00000474387 401 ntBASIC2.77□□□□□ -1.97
XPCQ01831 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.77□□□□□ -1.97
XPCQ01831 MIR6895-201ENST00000613497 78 ntBASIC2.77□□□□□ -1.97
XPCQ01831 MIRLET7C-201ENST00000362160 84 ntBASIC2.76□□□□□ -1.97
XPCQ01831 RNU6-442P-201ENST00000383968 104 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms