Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 Y_RNA.259-201ENST00000364619 101 ntBASIC0.49□□□□□ -2.33
IRX3P78415 RNU6-396P-201ENST00000365369 105 ntBASIC0.49□□□□□ -2.33
IRX3P78415 Y_RNA.376-201ENST00000365638 108 ntBASIC0.49□□□□□ -2.33
IRX3P78415 RNU6-1040P-201ENST00000383974 107 ntBASIC0.49□□□□□ -2.33
IRX3P78415 MT-TN-201ENST00000387400 73 ntBASIC0.49□□□□□ -2.33
IRX3P78415 MIR1827-201ENST00000408549 66 ntBASIC0.49□□□□□ -2.33
IRX3P78415 Y_RNA.599-201ENST00000410489 109 ntBASIC0.49□□□□□ -2.33
IRX3P78415 RNU6-994P-201ENST00000410507 111 ntBASIC0.49□□□□□ -2.33
IRX3P78415 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.49□□□□□ -2.33
IRX3P78415 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.49□□□□□ -2.33
IRX3P78415 MTND4P17-201ENST00000470444 350 ntBASIC0.49□□□□□ -2.33
IRX3P78415 RNU7-115P-201ENST00000516433 55 ntBASIC0.49□□□□□ -2.33
IRX3P78415 AC127455.1-201ENST00000565496 145 ntBASIC0.49□□□□□ -2.33
IRX3P78415 RPS29P30-201ENST00000600975 111 ntBASIC0.49□□□□□ -2.33
IRX3P78415 AL355073.2-201ENST00000612106 557 ntBASIC0.49□□□□□ -2.33
IRX3P78415 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
IRX3P78415 RNU6-674P-201ENST00000363831 107 ntBASIC0.48□□□□□ -2.33
IRX3P78415 RNU1-115P-201ENST00000365329 160 ntBASIC0.48□□□□□ -2.33
IRX3P78415 SNORA50A-201ENST00000384225 134 ntBASIC0.48□□□□□ -2.33
IRX3P78415 MIR605-201ENST00000385078 83 ntBASIC0.48□□□□□ -2.33
IRX3P78415 MIR559-201ENST00000385188 96 ntBASIC0.48□□□□□ -2.33
IRX3P78415 MTCO2P27-201ENST00000420740 428 ntBASIC0.48□□□□□ -2.33
IRX3P78415 MTCO3P10-201ENST00000455912 772 ntBASIC0.48□□□□□ -2.33
IRX3P78415 HMGN1P10-201ENST00000474557 553 ntBASIC0.48□□□□□ -2.33
IRX3P78415 SNORA40.14-201ENST00000516543 86 ntBASIC0.48□□□□□ -2.33
IRX3P78415 AC023827.1-201ENST00000569247 97 ntBASIC0.48□□□□□ -2.33
IRX3P78415 AL080274.1-201ENST00000605565 220 ntBASIC0.48□□□□□ -2.33
IRX3P78415 AC011373.1-201ENST00000607270 237 ntBASIC0.48□□□□□ -2.33
IRX3P78415 MIR377-201ENST00000362145 69 ntBASIC0.47□□□□□ -2.33
IRX3P78415 MIR1-1-201ENST00000362147 71 ntBASIC0.47□□□□□ -2.33
IRX3P78415 SNORA25.3-201ENST00000363205 127 ntBASIC0.47□□□□□ -2.33
IRX3P78415 Y_RNA.168-201ENST00000363740 102 ntBASIC0.47□□□□□ -2.33
IRX3P78415 Y_RNA.331-201ENST00000365267 102 ntBASIC0.47□□□□□ -2.33
IRX3P78415 RNU4-45P-201ENST00000365469 141 ntBASIC0.47□□□□□ -2.33
IRX3P78415 Y_RNA.505-201ENST00000384489 102 ntBASIC0.47□□□□□ -2.33
IRX3P78415 SNORD99-201ENST00000408612 74 ntBASIC0.47□□□□□ -2.33
IRX3P78415 RNU2-70P-201ENST00000410718 179 ntBASIC0.47□□□□□ -2.33
IRX3P78415 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.47□□□□□ -2.33
IRX3P78415 AC091951.2-201ENST00000500762 203 ntBASIC0.47□□□□□ -2.33
IRX3P78415 SNORA20.3-201ENST00000516880 132 ntBASIC0.47□□□□□ -2.33
IRX3P78415 AC024405.2-202ENST00000532731 184 ntBASIC0.47□□□□□ -2.33
IRX3P78415 AC006600.1-201ENST00000572529 153 ntBASIC0.47□□□□□ -2.33
IRX3P78415 Y_RNA.39-201ENST00000362620 98 ntBASIC0.46□□□□□ -2.34
IRX3P78415 Y_RNA.70-201ENST00000362886 110 ntBASIC0.46□□□□□ -2.34
IRX3P78415 Y_RNA.187-201ENST00000363918 113 ntBASIC0.46□□□□□ -2.34
IRX3P78415 Y_RNA.251-201ENST00000364551 99 ntBASIC0.46□□□□□ -2.34
IRX3P78415 RNY4P36-201ENST00000391116 96 ntBASIC0.46□□□□□ -2.34
IRX3P78415 RNU1-119P-201ENST00000391122 165 ntBASIC0.46□□□□□ -2.34
IRX3P78415 U8.17-201ENST00000391292 132 ntBASIC0.46□□□□□ -2.34
IRX3P78415 RNA5SP127-201ENST00000411051 133 ntBASIC0.46□□□□□ -2.34
IRX3P78415 AC138393.2-201ENST00000414742 246 ntBASIC0.46□□□□□ -2.34
IRX3P78415 RNU7-152P-201ENST00000458982 64 ntBASIC0.46□□□□□ -2.34
IRX3P78415 RPL23AP54-201ENST00000495129 419 ntBASIC0.46□□□□□ -2.34
IRX3P78415 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.46□□□□□ -2.34
IRX3P78415 RNU6-120P-201ENST00000516077 103 ntBASIC0.46□□□□□ -2.34
IRX3P78415 RNU6-699P-201ENST00000517081 110 ntBASIC0.46□□□□□ -2.34
IRX3P78415 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.46□□□□□ -2.34
IRX3P78415 MIR548AR-201ENST00000582191 57 ntBASIC0.46□□□□□ -2.34
IRX3P78415 AC006441.5-201ENST00000612680 209 ntBASIC0.46□□□□□ -2.34
IRX3P78415 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.46□□□□□ -2.34
IRX3P78415 MIR548AY-201ENST00000617669 107 ntBASIC0.46□□□□□ -2.34
IRX3P78415 7SK.10-201ENST00000621414 298 ntBASIC0.46□□□□□ -2.34
IRX3P78415 MIR4272-201ENST00000635924 64 ntBASIC0.46□□□□□ -2.34
IRX3P78415 AC099654.14-201ENST00000638599 341 ntBASIC0.46□□□□□ -2.34
IRX3P78415 SNORD105-201ENST00000386910 85 ntBASIC0.45□□□□□ -2.34
IRX3P78415 RNU6-1304P-201ENST00000411374 106 ntBASIC0.45□□□□□ -2.34
IRX3P78415 SNRPGP14-201ENST00000435400 219 ntBASIC0.45□□□□□ -2.34
IRX3P78415 AC023449.1-201ENST00000454464 154 ntBASIC0.45□□□□□ -2.34
IRX3P78415 AC011476.5-201ENST00000615594 130 ntBASIC0.45□□□□□ -2.34
IRX3P78415 MIR6516-201ENST00000630554 81 ntBASIC0.45□□□□□ -2.34
IRX3P78415 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
IRX3P78415 AC023934.1-201ENST00000574529 2389 ntBASIC0.44□□□□□ -2.34
IRX3P78415 Y_RNA.142-201ENST00000363491 102 ntBASIC0.44□□□□□ -2.34
IRX3P78415 Y_RNA.148-201ENST00000363557 117 ntBASIC0.44□□□□□ -2.34
IRX3P78415 RNU6-1209P-201ENST00000363655 107 ntBASIC0.44□□□□□ -2.34
IRX3P78415 RNU6-580P-201ENST00000365159 107 ntBASIC0.44□□□□□ -2.34
IRX3P78415 Y_RNA.439-201ENST00000384119 94 ntBASIC0.44□□□□□ -2.34
IRX3P78415 SNORA51.10-201ENST00000384418 136 ntBASIC0.44□□□□□ -2.34
IRX3P78415 Y_RNA.551-201ENST00000384661 102 ntBASIC0.44□□□□□ -2.34
IRX3P78415 MIR1302-7-201ENST00000408841 72 ntBASIC0.44□□□□□ -2.34
IRX3P78415 RNU6-847P-201ENST00000411115 108 ntBASIC0.44□□□□□ -2.34
IRX3P78415 RNU6-437P-201ENST00000459408 95 ntBASIC0.44□□□□□ -2.34
IRX3P78415 U8.20-201ENST00000459445 131 ntBASIC0.44□□□□□ -2.34
IRX3P78415 AC107297.1-201ENST00000459991 176 ntBASIC0.44□□□□□ -2.34
IRX3P78415 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.44□□□□□ -2.34
IRX3P78415 RN7SKP12-201ENST00000516275 143 ntBASIC0.44□□□□□ -2.34
IRX3P78415 Y_RNA.718-201ENST00000517110 102 ntBASIC0.44□□□□□ -2.34
IRX3P78415 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
IRX3P78415 AC008507.4-201ENST00000585464 127 ntBASIC0.44□□□□□ -2.34
IRX3P78415 RNA5SP257-201ENST00000363023 116 ntBASIC0.43□□□□□ -2.34
IRX3P78415 RNU6-268P-201ENST00000364174 107 ntBASIC0.43□□□□□ -2.34
IRX3P78415 Y_RNA.252-201ENST00000364556 101 ntBASIC0.43□□□□□ -2.34
IRX3P78415 RNU6-144P-201ENST00000383951 107 ntBASIC0.43□□□□□ -2.34
IRX3P78415 Y_RNA.463-201ENST00000384271 102 ntBASIC0.43□□□□□ -2.34
IRX3P78415 SNORA2B-201ENST00000384583 137 ntBASIC0.43□□□□□ -2.34
IRX3P78415 RNU6-21P-201ENST00000384710 107 ntBASIC0.43□□□□□ -2.34
IRX3P78415 Y_RNA.619-201ENST00000410951 90 ntBASIC0.43□□□□□ -2.34
IRX3P78415 SEPT14P8-201ENST00000508026 178 ntBASIC0.43□□□□□ -2.34
IRX3P78415 FGF7P4-201ENST00000509595 295 ntBASIC0.43□□□□□ -2.34
IRX3P78415 RNU4-57P-201ENST00000515980 135 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms