Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SNORA26-201ENST00000391286 122 ntBASIC1.8□□□□□ -2.12
SUMO3P55854 RNU2-40P-201ENST00000410833 196 ntBASIC1.8□□□□□ -2.12
SUMO3P55854 SNRPGP14-201ENST00000435400 219 ntBASIC1.8□□□□□ -2.12
SUMO3P55854 HSPE1P24-201ENST00000450782 238 ntBASIC1.8□□□□□ -2.12
SUMO3P55854 AC108706.1-201ENST00000611053 297 ntBASIC1.8□□□□□ -2.12
SUMO3P55854 Y_RNA.783-201ENST00000613546 102 ntBASIC1.8□□□□□ -2.12
SUMO3P55854 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SUMO3P55854 Y_RNA.75-201ENST00000362927 97 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 Y_RNA.182-201ENST00000363880 111 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 RNU6-268P-201ENST00000364174 107 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 Y_RNA.233-201ENST00000364407 101 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 SNORD1A-201ENST00000364968 72 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 RNU6-301P-201ENST00000384277 107 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 MIR934-201ENST00000401241 83 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 Y_RNA.622-201ENST00000411091 108 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 AC015922.2-201ENST00000435593 184 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 RNA5SP153-201ENST00000516498 76 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 AC109810.1-201ENST00000534066 224 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 AP002392.1-201ENST00000537692 208 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 AL160236.1-201ENST00000556317 195 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 MIR8063-201ENST00000621930 81 ntBASIC1.79□□□□□ -2.12
SUMO3P55854 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SUMO3P55854 SNORA2.2-201ENST00000365473 135 ntBASIC1.78□□□□□ -2.12
SUMO3P55854 RNU6-484P-201ENST00000384016 107 ntBASIC1.78□□□□□ -2.12
SUMO3P55854 Y_RNA.432-201ENST00000384087 111 ntBASIC1.78□□□□□ -2.12
SUMO3P55854 Y_RNA.486-201ENST00000384398 107 ntBASIC1.78□□□□□ -2.12
SUMO3P55854 RNU4-43P-201ENST00000410628 137 ntBASIC1.78□□□□□ -2.12
SUMO3P55854 MTND5P15-201ENST00000434246 349 ntBASIC1.78□□□□□ -2.12
SUMO3P55854 RNU7-120P-201ENST00000459334 63 ntBASIC1.78□□□□□ -2.12
SUMO3P55854 RNU6-182P-201ENST00000516970 105 ntBASIC1.78□□□□□ -2.12
SUMO3P55854 RNU6-365P-201ENST00000517113 106 ntBASIC1.78□□□□□ -2.12
SUMO3P55854 MIR5089-201ENST00000580047 84 ntBASIC1.78□□□□□ -2.12
SUMO3P55854 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.78□□□□□ -2.12
SUMO3P55854 AC004792.1-201ENST00000614523 137 ntBASIC1.78□□□□□ -2.12
SUMO3P55854 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.78□□□□□ -2.12
SUMO3P55854 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
SUMO3P55854 SNORD45.3-201ENST00000363836 72 ntBASIC1.77□□□□□ -2.13
SUMO3P55854 RNU6-275P-201ENST00000364910 107 ntBASIC1.77□□□□□ -2.13
SUMO3P55854 SNORD38C-201ENST00000384381 69 ntBASIC1.77□□□□□ -2.13
SUMO3P55854 MIR653-201ENST00000385279 96 ntBASIC1.77□□□□□ -2.13
SUMO3P55854 RNU1-78P-201ENST00000391248 165 ntBASIC1.77□□□□□ -2.13
SUMO3P55854 AC019129.1-201ENST00000403786 261 ntBASIC1.77□□□□□ -2.13
SUMO3P55854 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.77□□□□□ -2.13
SUMO3P55854 AL121914.1-201ENST00000450188 156 ntBASIC1.77□□□□□ -2.13
SUMO3P55854 AC079140.2-201ENST00000506193 142 ntBASIC1.77□□□□□ -2.13
SUMO3P55854 MRPS18CP4-201ENST00000535821 231 ntBASIC1.77□□□□□ -2.13
SUMO3P55854 MIR4448-201ENST00000584360 86 ntBASIC1.77□□□□□ -2.13
SUMO3P55854 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.77□□□□□ -2.13
SUMO3P55854 AC106754.2-201ENST00000623006 233 ntBASIC1.77□□□□□ -2.13
SUMO3P55854 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SUMO3P55854 WWP1P1-201ENST00000466609 2769 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SUMO3P55854 AL442644.1-201ENST00000454390 3105 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 MIR136-201ENST00000385207 82 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 SNORA79-201ENST00000408376 140 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 RNU2-70P-201ENST00000410718 179 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 AC107393.1-201ENST00000512403 346 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 RNU1-41P-201ENST00000516161 162 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 RNU6-561P-201ENST00000516222 102 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 RNU6-830P-201ENST00000516353 107 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 RNU1-48P-201ENST00000516400 162 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 RNU6-197P-201ENST00000516680 100 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 AC090142.3-201ENST00000519012 385 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 AC090049.2-201ENST00000550377 109 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 MIR4422-201ENST00000581938 83 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 MIR3668-201ENST00000582138 75 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 AL513534.2-201ENST00000603836 250 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.76□□□□□ -2.13
SUMO3P55854 U6.106-201ENST00000636360 105 ntBASIC1.76□□□□□ -2.13
SUMO3P55854 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SUMO3P55854 RNU6-312P-201ENST00000364629 107 ntBASIC1.75□□□□□ -2.13
SUMO3P55854 Y_RNA.634-201ENST00000364811 113 ntBASIC1.75□□□□□ -2.13
SUMO3P55854 RNA5SP138-201ENST00000365098 114 ntBASIC1.75□□□□□ -2.13
SUMO3P55854 Y_RNA.412-201ENST00000384001 104 ntBASIC1.75□□□□□ -2.13
SUMO3P55854 MIR526A1-201ENST00000384897 85 ntBASIC1.75□□□□□ -2.13
SUMO3P55854 MIR15B-201ENST00000385045 98 ntBASIC1.75□□□□□ -2.13
SUMO3P55854 RNU2-64P-201ENST00000411315 191 ntBASIC1.75□□□□□ -2.13
SUMO3P55854 RNU6-322P-201ENST00000516010 103 ntBASIC1.75□□□□□ -2.13
SUMO3P55854 RNU6-917P-201ENST00000516294 104 ntBASIC1.75□□□□□ -2.13
SUMO3P55854 RNU6-504P-201ENST00000516568 104 ntBASIC1.75□□□□□ -2.13
SUMO3P55854 AC022559.1-201ENST00000520905 205 ntBASIC1.75□□□□□ -2.13
SUMO3P55854 AC097639.2-201ENST00000603159 172 ntBASIC1.75□□□□□ -2.13
SUMO3P55854 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
SUMO3P55854 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.74□□□□□ -2.13
SUMO3P55854 Y_RNA.23-201ENST00000362496 106 ntBASIC1.74□□□□□ -2.13
SUMO3P55854 SNORD114-1-201ENST00000362705 72 ntBASIC1.74□□□□□ -2.13
SUMO3P55854 SNORD24-201ENST00000383884 75 ntBASIC1.74□□□□□ -2.13
SUMO3P55854 AC027119.1-201ENST00000440877 241 ntBASIC1.74□□□□□ -2.13
SUMO3P55854 AC092991.1-201ENST00000477176 376 ntBASIC1.74□□□□□ -2.13
SUMO3P55854 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
SUMO3P55854 RNU6-1219P-201ENST00000516143 112 ntBASIC1.74□□□□□ -2.13
SUMO3P55854 FAM106DP-201ENST00000586416 501 ntBASIC1.74□□□□□ -2.13
SUMO3P55854 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
SUMO3P55854 AP000553.5-201ENST00000641933 54 ntBASIC1.74□□□□□ -2.13
SUMO3P55854 RNA5SP338-201ENST00000410495 85 ntBASIC1.73□□□□□ -2.13
SUMO3P55854 SNX2P2-201ENST00000424553 323 ntBASIC1.73□□□□□ -2.13
SUMO3P55854 SNRPGP13-201ENST00000442212 177 ntBASIC1.73□□□□□ -2.13
SUMO3P55854 AC245517.4-201ENST00000448601 281 ntBASIC1.73□□□□□ -2.13
SUMO3P55854 Y_RNA.666-201ENST00000516187 112 ntBASIC1.73□□□□□ -2.13
SUMO3P55854 MIR3935-201ENST00000583472 104 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms