Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC134026.1-201ENST00000623249 2239 ntBASIC1.13□□□□□ -2.23
HMGCS2P54868 Y_RNA.203-201ENST00000364106 102 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 Y_RNA.376-201ENST00000365638 108 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 RNU6-969P-201ENST00000383900 105 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 RNU6-1248P-201ENST00000391096 64 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 AL078595.1-201ENST00000404458 226 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 SNX2P2-201ENST00000424553 323 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 RPL39P38-201ENST00000467018 153 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 AC091959.1-201ENST00000495857 238 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 RNU7-12P-201ENST00000516030 62 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 RNU6-1338P-201ENST00000516328 91 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 RNU6-635P-201ENST00000516651 102 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 RNU6-570P-201ENST00000517051 105 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 MIR5000-201ENST00000577717 103 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 MIR4719-201ENST00000585233 84 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 AC008737.2-201ENST00000599446 118 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 AC027279.3-201ENST00000625055 122 ntBASIC1.12□□□□□ -2.23
HMGCS2P54868 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.12□□□□□ -2.23
HMGCS2P54868 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMGCS2P54868 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
HMGCS2P54868 RNU6-199P-201ENST00000362954 107 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 RNU6-833P-201ENST00000363486 107 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 SNORD114-26-201ENST00000363543 72 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 Y_RNA.217-201ENST00000364214 105 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 RNU6-342P-201ENST00000384521 104 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 RNU6-1105P-201ENST00000384774 107 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 MIR526A1-201ENST00000384897 85 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 MT-TW-201ENST00000387382 68 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 MIR1278-201ENST00000408753 81 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 SNORA36B-201ENST00000410438 131 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 PIGPP3-201ENST00000425307 415 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 AL358176.2-201ENST00000425769 204 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.11□□□□□ -2.23
HMGCS2P54868 Y_RNA.641-201ENST00000459414 105 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 RPL23AP54-201ENST00000495129 419 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 AC114811.1-201ENST00000507207 168 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 AL512310.8-201ENST00000550183 120 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 AL117187.1-201ENST00000555482 181 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 MIR3664-201ENST00000579074 99 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
HMGCS2P54868 AC005357.1-201ENST00000588399 301 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 AC120024.3-201ENST00000603167 156 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 AL360085.1-201ENST00000604713 532 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 MIR8062-201ENST00000621515 85 ntBASIC1.11□□□□□ -2.23
HMGCS2P54868 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
HMGCS2P54868 UBE2WP1-201ENST00000362030 340 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 RNU6-238P-201ENST00000363313 106 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 RNU6-1209P-201ENST00000363655 107 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 RNU6-674P-201ENST00000363831 107 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 SNORD50B-201ENST00000364995 70 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 RNU6-662P-201ENST00000384253 104 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 RNU6-472P-201ENST00000384299 107 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 Y_RNA.574-201ENST00000384766 95 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 SNORD41-201ENST00000386967 70 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 MTCO2P33-201ENST00000402100 465 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.1□□□□□ -2.23
HMGCS2P54868 SNRPGP10-201ENST00000432323 225 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.1□□□□□ -2.23
HMGCS2P54868 CYCTP-201ENST00000504253 315 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 SERF1AP1-201ENST00000514575 187 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 SNORA27.4-201ENST00000516650 95 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 RNU6-165P-201ENST00000517170 99 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 CYP3A137P-201ENST00000562436 69 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 MIR4698-201ENST00000577795 80 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 AC007742.2-201ENST00000618226 398 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 MIR8065-201ENST00000620577 100 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 AC099654.10-201ENST00000640395 161 ntBASIC1.1□□□□□ -2.23
HMGCS2P54868 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
HMGCS2P54868 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
HMGCS2P54868 RNU6-1272P-201ENST00000362776 107 ntBASIC1.09□□□□□ -2.23
HMGCS2P54868 Y_RNA.237-201ENST00000364439 102 ntBASIC1.09□□□□□ -2.23
HMGCS2P54868 Y_RNA.483-201ENST00000384380 101 ntBASIC1.09□□□□□ -2.23
HMGCS2P54868 RNU6-163P-201ENST00000384396 106 ntBASIC1.09□□□□□ -2.23
HMGCS2P54868 Y_RNA.518-201ENST00000384552 113 ntBASIC1.09□□□□□ -2.23
HMGCS2P54868 SNORA53-201ENST00000391141 249 ntBASIC1.09□□□□□ -2.23
HMGCS2P54868 RNU6-437P-201ENST00000459408 95 ntBASIC1.09□□□□□ -2.23
HMGCS2P54868 NDUFA4P2-201ENST00000489989 244 ntBASIC1.09□□□□□ -2.23
HMGCS2P54868 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.09□□□□□ -2.23
HMGCS2P54868 SCARNA24.2-201ENST00000516968 130 ntBASIC1.09□□□□□ -2.23
HMGCS2P54868 DEFB108E-201ENST00000524692 240 ntBASIC1.09□□□□□ -2.23
HMGCS2P54868 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.09□□□□□ -2.23
HMGCS2P54868 AC090049.2-201ENST00000550377 109 ntBASIC1.09□□□□□ -2.23
HMGCS2P54868 AL512605.2-201ENST00000592972 256 ntBASIC1.09□□□□□ -2.23
HMGCS2P54868 AL442644.1-201ENST00000454390 3105 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 SNORA25.1-201ENST00000362326 128 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 RNU6-899P-201ENST00000363947 107 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 MIR891A-201ENST00000401237 79 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 MLLT10P1-201ENST00000418346 262 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 MTND2P23-201ENST00000422990 651 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 TRBVB-201ENST00000477100 408 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 RNU7-40P-201ENST00000516397 64 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 SNORD45.4-201ENST00000516629 73 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 RNU6-922P-201ENST00000516753 99 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 CYP3A52P-201ENST00000563326 91 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 AL513534.2-201ENST00000603836 250 ntBASIC1.08□□□□□ -2.24
HMGCS2P54868 AL008718.3-201ENST00000610217 321 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms