Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 FAM71BP1-201ENST00000604431 523 ntBASIC3.03□□□□□ -1.92
EPHA4P54764 AC022513.1-201ENST00000624512 117 ntBASIC3.03□□□□□ -1.92
EPHA4P54764 AC096644.4-201ENST00000563417 2912 ntBASIC3.03□□□□□ -1.93
EPHA4P54764 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
EPHA4P54764 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
EPHA4P54764 MIRLET7C-201ENST00000362160 84 ntBASIC3.02□□□□□ -1.93
EPHA4P54764 BX510359.4-201ENST00000423750 193 ntBASIC3.02□□□□□ -1.93
EPHA4P54764 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.02□□□□□ -1.93
EPHA4P54764 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.02□□□□□ -1.93
EPHA4P54764 AC008885.1-201ENST00000514930 301 ntBASIC3.02□□□□□ -1.93
EPHA4P54764 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.02□□□□□ -1.93
EPHA4P54764 Y_RNA.299-201ENST00000364973 94 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 MIR452-201ENST00000385020 85 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 RNU11-3P-201ENST00000391111 133 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 RNA5SP144-201ENST00000410846 116 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.01□□□□□ -1.93
EPHA4P54764 UBL5P3-201ENST00000475112 231 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 RNU7-12P-201ENST00000516030 62 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 RNU6-904P-201ENST00000516206 101 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 RNU6-109P-201ENST00000516364 107 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 RNU6-184P-201ENST00000516514 107 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 ZNF861P-201ENST00000588126 639 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 HSPE1P19-201ENST00000603327 295 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.01□□□□□ -1.93
EPHA4P54764 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 AC021613.1-201ENST00000623880 111 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.01□□□□□ -1.93
EPHA4P54764 FAM35CP-201ENST00000554755 2470 ntBASIC3.01□□□□□ -1.93
EPHA4P54764 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
EPHA4P54764 SNORA71.1-201ENST00000364523 117 ntBASIC3□□□□□ -1.93
EPHA4P54764 SNORA26.2-201ENST00000390922 122 ntBASIC3□□□□□ -1.93
EPHA4P54764 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3□□□□□ -1.93
EPHA4P54764 RNU2-7P-201ENST00000410794 178 ntBASIC3□□□□□ -1.93
EPHA4P54764 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3□□□□□ -1.93
EPHA4P54764 RNU7-26P-201ENST00000458980 63 ntBASIC3□□□□□ -1.93
EPHA4P54764 RNU2-11P-201ENST00000459191 187 ntBASIC3□□□□□ -1.93
EPHA4P54764 RNA5SP385-201ENST00000515947 110 ntBASIC3□□□□□ -1.93
EPHA4P54764 SNORA31.10-201ENST00000516482 106 ntBASIC3□□□□□ -1.93
EPHA4P54764 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3□□□□□ -1.93
EPHA4P54764 RNA5SP137-201ENST00000516833 135 ntBASIC3□□□□□ -1.93
EPHA4P54764 DEFB131E-201ENST00000532329 154 ntBASIC3□□□□□ -1.93
EPHA4P54764 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3□□□□□ -1.93
EPHA4P54764 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
EPHA4P54764 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
EPHA4P54764 Y_RNA.10-201ENST00000362371 110 ntBASIC2.99□□□□□ -1.93
EPHA4P54764 Y_RNA.93-201ENST00000363066 109 ntBASIC2.99□□□□□ -1.93
EPHA4P54764 Y_RNA.107-201ENST00000363190 121 ntBASIC2.99□□□□□ -1.93
EPHA4P54764 SNORA54-201ENST00000384281 123 ntBASIC2.99□□□□□ -1.93
EPHA4P54764 U8.16-201ENST00000391279 133 ntBASIC2.99□□□□□ -1.93
EPHA4P54764 RN7SKP123-201ENST00000410732 291 ntBASIC2.99□□□□□ -1.93
EPHA4P54764 RNA5SP168-201ENST00000516642 112 ntBASIC2.99□□□□□ -1.93
EPHA4P54764 MIR3152-201ENST00000579801 74 ntBASIC2.99□□□□□ -1.93
EPHA4P54764 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.99□□□□□ -1.93
EPHA4P54764 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.99□□□□□ -1.93
EPHA4P54764 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.99□□□□□ -1.93
EPHA4P54764 AL035425.3-201ENST00000564206 4996 ntBASIC2.99□□□□□ -1.93
EPHA4P54764 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.98□□□□□ -1.93
EPHA4P54764 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
EPHA4P54764 RNU6-661P-201ENST00000362409 107 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 RNU6-49P-201ENST00000384256 107 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 SNORA44-201ENST00000384584 132 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 RNA5SP465-201ENST00000391195 109 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 RNA5SP261-201ENST00000410536 106 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 SNORA19.1-201ENST00000410656 129 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 MTATP8P2-201ENST00000435212 202 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.98□□□□□ -1.93
EPHA4P54764 HSPE1P9-201ENST00000440046 311 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 RPS23P4-201ENST00000487908 423 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 SCARNA13-201ENST00000516672 275 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 RNU7-53P-201ENST00000516705 60 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 RNU7-181P-201ENST00000517234 74 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 AC022202.1-201ENST00000613515 211 ntBASIC2.98□□□□□ -1.93
EPHA4P54764 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.98□□□□□ -1.93
EPHA4P54764 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
EPHA4P54764 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
EPHA4P54764 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
EPHA4P54764 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.97□□□□□ -1.93
EPHA4P54764 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
EPHA4P54764 MIR22-201ENST00000362190 85 ntBASIC2.97□□□□□ -1.93
EPHA4P54764 Y_RNA.531-201ENST00000384589 121 ntBASIC2.97□□□□□ -1.93
EPHA4P54764 MIR136-201ENST00000385207 82 ntBASIC2.97□□□□□ -1.93
EPHA4P54764 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.97□□□□□ -1.93
EPHA4P54764 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.97□□□□□ -1.93
EPHA4P54764 AC004812.1-201ENST00000540773 146 ntBASIC2.97□□□□□ -1.93
EPHA4P54764 EIF4BP1-201ENST00000554881 351 ntBASIC2.97□□□□□ -1.93
EPHA4P54764 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
EPHA4P54764 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
EPHA4P54764 RNU1-109P-201ENST00000383960 147 ntBASIC2.96□□□□□ -1.94
EPHA4P54764 RNU1-148P-201ENST00000384472 162 ntBASIC2.96□□□□□ -1.94
EPHA4P54764 MIR520A-201ENST00000384862 85 ntBASIC2.96□□□□□ -1.94
EPHA4P54764 MIR597-201ENST00000384968 97 ntBASIC2.96□□□□□ -1.94
EPHA4P54764 RNA5SP344-201ENST00000411081 104 ntBASIC2.96□□□□□ -1.94
EPHA4P54764 COTL1P1-201ENST00000422309 375 ntBASIC2.96□□□□□ -1.94
EPHA4P54764 RPPH1-2P-201ENST00000516688 293 ntBASIC2.96□□□□□ -1.94
EPHA4P54764 RNU6-844P-201ENST00000517175 102 ntBASIC2.96□□□□□ -1.94
EPHA4P54764 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.96□□□□□ -1.94
EPHA4P54764 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.96□□□□□ -1.94
EPHA4P54764 AC093831.2-201ENST00000624393 3427 ntBASIC2.96□□□□□ -1.94
EPHA4P54764 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 644.6 ms