Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 RNU2-55P-201ENST00000411146 174 ntBASIC1.78□□□□□ -2.12
PMS2P54278 HSPE1P9-201ENST00000440046 311 ntBASIC1.78□□□□□ -2.12
PMS2P54278 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.78□□□□□ -2.12
PMS2P54278 AL049830.1-201ENST00000468034 425 ntBASIC1.78□□□□□ -2.12
PMS2P54278 HMGN1P7-201ENST00000491722 313 ntBASIC1.78□□□□□ -2.12
PMS2P54278 RPS29P11-201ENST00000496507 171 ntBASIC1.78□□□□□ -2.12
PMS2P54278 AC008834.1-201ENST00000511612 175 ntBASIC1.78□□□□□ -2.12
PMS2P54278 Y_RNA.662-201ENST00000516028 97 ntBASIC1.78□□□□□ -2.12
PMS2P54278 RNU6-1291P-201ENST00000516591 104 ntBASIC1.78□□□□□ -2.12
PMS2P54278 RNU7-28P-201ENST00000516759 62 ntBASIC1.78□□□□□ -2.12
PMS2P54278 MIR4762-201ENST00000585261 75 ntBASIC1.78□□□□□ -2.12
PMS2P54278 RNU2-4P-201ENST00000606190 192 ntBASIC1.78□□□□□ -2.12
PMS2P54278 AC108706.1-201ENST00000611053 297 ntBASIC1.78□□□□□ -2.12
PMS2P54278 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
PMS2P54278 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
PMS2P54278 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PMS2P54278 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PMS2P54278 RNU6-414P-201ENST00000363705 104 ntBASIC1.77□□□□□ -2.13
PMS2P54278 Y_RNA.267-201ENST00000364679 109 ntBASIC1.77□□□□□ -2.13
PMS2P54278 Y_RNA.412-201ENST00000384001 104 ntBASIC1.77□□□□□ -2.13
PMS2P54278 MIR30A-201ENST00000385092 71 ntBASIC1.77□□□□□ -2.13
PMS2P54278 RNU4-43P-201ENST00000410628 137 ntBASIC1.77□□□□□ -2.13
PMS2P54278 RN7SKP51-201ENST00000410781 304 ntBASIC1.77□□□□□ -2.13
PMS2P54278 AC003989.2-201ENST00000440224 169 ntBASIC1.77□□□□□ -2.13
PMS2P54278 AC005840.1-201ENST00000498412 377 ntBASIC1.77□□□□□ -2.13
PMS2P54278 RNA5SP437-201ENST00000517249 129 ntBASIC1.77□□□□□ -2.13
PMS2P54278 MIR3198-2-201ENST00000577868 80 ntBASIC1.77□□□□□ -2.13
PMS2P54278 MIR3683-201ENST00000580847 82 ntBASIC1.77□□□□□ -2.13
PMS2P54278 snoU13.31-201ENST00000607291 104 ntBASIC1.77□□□□□ -2.13
PMS2P54278 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PMS2P54278 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.76□□□□□ -2.13
PMS2P54278 Y_RNA.253-201ENST00000364562 112 ntBASIC1.76□□□□□ -2.13
PMS2P54278 RNU6-1062P-201ENST00000383908 107 ntBASIC1.76□□□□□ -2.13
PMS2P54278 RNU6-997P-201ENST00000384725 107 ntBASIC1.76□□□□□ -2.13
PMS2P54278 MT-TT-201ENST00000387460 66 ntBASIC1.76□□□□□ -2.13
PMS2P54278 RNU6-440P-201ENST00000390882 105 ntBASIC1.76□□□□□ -2.13
PMS2P54278 RNA5SP109-201ENST00000391010 116 ntBASIC1.76□□□□□ -2.13
PMS2P54278 RNA5SP482-201ENST00000391269 118 ntBASIC1.76□□□□□ -2.13
PMS2P54278 AL606845.1-201ENST00000404881 255 ntBASIC1.76□□□□□ -2.13
PMS2P54278 AC245047.3-201ENST00000429428 127 ntBASIC1.76□□□□□ -2.13
PMS2P54278 AC233266.1-201ENST00000454518 96 ntBASIC1.76□□□□□ -2.13
PMS2P54278 Y_RNA.797-201ENST00000515977 94 ntBASIC1.76□□□□□ -2.13
PMS2P54278 AC109810.1-201ENST00000534066 224 ntBASIC1.76□□□□□ -2.13
PMS2P54278 RPL23AP91-201ENST00000569211 455 ntBASIC1.76□□□□□ -2.13
PMS2P54278 AC242852.1-201ENST00000612151 96 ntBASIC1.76□□□□□ -2.13
PMS2P54278 MIR8074-201ENST00000615081 81 ntBASIC1.76□□□□□ -2.13
PMS2P54278 uc_338.4-201ENST00000616635 176 ntBASIC1.76□□□□□ -2.13
PMS2P54278 MIR8054-201ENST00000620877 86 ntBASIC1.76□□□□□ -2.13
PMS2P54278 AC244015.1-201ENST00000622301 99 ntBASIC1.76□□□□□ -2.13
PMS2P54278 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PMS2P54278 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PMS2P54278 Y_RNA.182-201ENST00000363880 111 ntBASIC1.75□□□□□ -2.13
PMS2P54278 RNA5SP190-201ENST00000365222 118 ntBASIC1.75□□□□□ -2.13
PMS2P54278 RNU6-1138P-201ENST00000365359 106 ntBASIC1.75□□□□□ -2.13
PMS2P54278 RNU6-950P-201ENST00000384651 107 ntBASIC1.75□□□□□ -2.13
PMS2P54278 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PMS2P54278 SNORA17.3-201ENST00000391159 129 ntBASIC1.75□□□□□ -2.13
PMS2P54278 MIR934-201ENST00000401241 83 ntBASIC1.75□□□□□ -2.13
PMS2P54278 RNU6-1135P-201ENST00000411083 103 ntBASIC1.75□□□□□ -2.13
PMS2P54278 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.75□□□□□ -2.13
PMS2P54278 SNRPGP8-201ENST00000454064 226 ntBASIC1.75□□□□□ -2.13
PMS2P54278 AC245047.8-201ENST00000456455 284 ntBASIC1.75□□□□□ -2.13
PMS2P54278 AC074198.2-201ENST00000508153 258 ntBASIC1.75□□□□□ -2.13
PMS2P54278 SNORA31.10-201ENST00000516482 106 ntBASIC1.75□□□□□ -2.13
PMS2P54278 SNORA25.15-201ENST00000516487 89 ntBASIC1.75□□□□□ -2.13
PMS2P54278 AL160236.1-201ENST00000556317 195 ntBASIC1.75□□□□□ -2.13
PMS2P54278 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.75□□□□□ -2.13
PMS2P54278 AL591926.4-201ENST00000616895 298 ntBASIC1.75□□□□□ -2.13
PMS2P54278 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PMS2P54278 MIR378A-201ENST00000362177 66 ntBASIC1.74□□□□□ -2.13
PMS2P54278 U8.5-201ENST00000364528 136 ntBASIC1.74□□□□□ -2.13
PMS2P54278 MIR522-201ENST00000385071 87 ntBASIC1.74□□□□□ -2.13
PMS2P54278 MIR9-3-201ENST00000385084 90 ntBASIC1.74□□□□□ -2.13
PMS2P54278 RNU6-394P-201ENST00000410735 107 ntBASIC1.74□□□□□ -2.13
PMS2P54278 Y_RNA.621-201ENST00000411065 96 ntBASIC1.74□□□□□ -2.13
PMS2P54278 snoU13.27-201ENST00000459278 104 ntBASIC1.74□□□□□ -2.13
PMS2P54278 NDUFA4P2-201ENST00000489989 244 ntBASIC1.74□□□□□ -2.13
PMS2P54278 SNORD77.4-201ENST00000516158 81 ntBASIC1.74□□□□□ -2.13
PMS2P54278 RNU6-1007P-201ENST00000516586 107 ntBASIC1.74□□□□□ -2.13
PMS2P54278 MIR4431-201ENST00000579990 94 ntBASIC1.74□□□□□ -2.13
PMS2P54278 AC087685.1-201ENST00000587507 141 ntBASIC1.74□□□□□ -2.13
PMS2P54278 AC084768.2-201ENST00000622736 221 ntBASIC1.74□□□□□ -2.13
PMS2P54278 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
PMS2P54278 RNU6-728P-201ENST00000365375 104 ntBASIC1.73□□□□□ -2.13
PMS2P54278 RNU6-439P-201ENST00000384188 106 ntBASIC1.73□□□□□ -2.13
PMS2P54278 RN7SKP200-201ENST00000410564 320 ntBASIC1.73□□□□□ -2.13
PMS2P54278 SNRPGP10-201ENST00000432323 225 ntBASIC1.73□□□□□ -2.13
PMS2P54278 AC023449.1-201ENST00000454464 154 ntBASIC1.73□□□□□ -2.13
PMS2P54278 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.73□□□□□ -2.13
PMS2P54278 SNORD13-201ENST00000459299 104 ntBASIC1.73□□□□□ -2.13
PMS2P54278 OR9P1P-201ENST00000496431 281 ntBASIC1.73□□□□□ -2.13
PMS2P54278 RNU6-126P-201ENST00000516685 103 ntBASIC1.73□□□□□ -2.13
PMS2P54278 RNU2-56P-201ENST00000516826 190 ntBASIC1.73□□□□□ -2.13
PMS2P54278 Y_RNA.714-201ENST00000517065 90 ntBASIC1.73□□□□□ -2.13
PMS2P54278 SNORA28-201ENST00000606769 126 ntBASIC1.73□□□□□ -2.13
PMS2P54278 JPX_2.1-201ENST00000614161 69 ntBASIC1.73□□□□□ -2.13
PMS2P54278 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PMS2P54278 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.72□□□□□ -2.13
PMS2P54278 RNU4-84P-201ENST00000364200 139 ntBASIC1.72□□□□□ -2.13
PMS2P54278 RNU6-484P-201ENST00000384016 107 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms