Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MIR4778-201ENST00000577635 80 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 MIR4762-201ENST00000585261 75 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 AC090425.1-201ENST00000610007 140 ntBASIC1.55□□□□□ -2.16
CLCNKAP51800 Y_RNA.140-201ENST00000363474 103 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 Y_RNA.199-201ENST00000364014 102 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 Y_RNA.200-201ENST00000364018 102 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 snoU2_19.4-201ENST00000364329 80 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 Y_RNA.229-201ENST00000364347 113 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 Y_RNA.552-201ENST00000384665 112 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 MIR194-1-201ENST00000384892 85 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 RNU6-131P-201ENST00000391144 107 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 AC108667.1-201ENST00000428618 249 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 AC245047.8-201ENST00000456455 284 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 SNORD53B-201ENST00000577887 78 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 SNORA77B-201ENST00000578179 125 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 MIR2681-201ENST00000581814 105 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 AL049861.1-201ENST00000603130 150 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 AC120024.3-201ENST00000603167 156 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 AL021707.8-201ENST00000609428 183 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 AC141273.2-201ENST00000618989 130 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 AL513423.1-201ENST00000621695 132 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 SNORD3E-202ENST00000627253 216 ntBASIC1.54□□□□□ -2.16
CLCNKAP51800 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CLCNKAP51800 Y_RNA.274-201ENST00000364714 101 ntBASIC1.53□□□□□ -2.16
CLCNKAP51800 RNU6-60P-201ENST00000364792 103 ntBASIC1.53□□□□□ -2.16
CLCNKAP51800 RNU4-17P-201ENST00000365598 141 ntBASIC1.53□□□□□ -2.16
CLCNKAP51800 MIR660-201ENST00000385235 97 ntBASIC1.53□□□□□ -2.16
CLCNKAP51800 RNU6-381P-201ENST00000391259 108 ntBASIC1.53□□□□□ -2.16
CLCNKAP51800 AC004965.1-201ENST00000413033 213 ntBASIC1.53□□□□□ -2.16
CLCNKAP51800 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.53□□□□□ -2.16
CLCNKAP51800 AC093850.1-201ENST00000454121 251 ntBASIC1.53□□□□□ -2.16
CLCNKAP51800 AC114811.1-201ENST00000507207 168 ntBASIC1.53□□□□□ -2.16
CLCNKAP51800 SCARNA8-201ENST00000515924 131 ntBASIC1.53□□□□□ -2.16
CLCNKAP51800 MIR4303-201ENST00000581299 66 ntBASIC1.53□□□□□ -2.16
CLCNKAP51800 BX248123.2-201ENST00000606318 124 ntBASIC1.53□□□□□ -2.16
CLCNKAP51800 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CLCNKAP51800 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CLCNKAP51800 MIR411-201ENST00000362239 96 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 Y_RNA.83-201ENST00000363005 113 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 SNORD50B-201ENST00000364995 70 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 RNU6-163P-201ENST00000384396 106 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 Y_RNA.515-201ENST00000384535 112 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 MT-TT-201ENST00000387460 66 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 SNORD72-201ENST00000390994 80 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 COX6CP14-201ENST00000469580 174 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.52□□□□□ -2.17
CLCNKAP51800 CYCTP-201ENST00000504253 315 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 RNU7-12P-201ENST00000516030 62 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 RNU6-453P-201ENST00000516819 85 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 SUMO2P16-201ENST00000519475 264 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 MIR4308-201ENST00000580634 81 ntBASIC1.52□□□□□ -2.17
CLCNKAP51800 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.52□□□□□ -2.17
CLCNKAP51800 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
CLCNKAP51800 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLCNKAP51800 RNU6-1084P-201ENST00000362498 107 ntBASIC1.51□□□□□ -2.17
CLCNKAP51800 Y_RNA.257-201ENST00000364596 102 ntBASIC1.51□□□□□ -2.17
CLCNKAP51800 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
CLCNKAP51800 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.51□□□□□ -2.17
CLCNKAP51800 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.51□□□□□ -2.17
CLCNKAP51800 SNORD45.4-201ENST00000516629 73 ntBASIC1.51□□□□□ -2.17
CLCNKAP51800 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLCNKAP51800 ICE2P2-201ENST00000483823 2787 ntBASIC1.51□□□□□ -2.17
CLCNKAP51800 RNU6-1123P-201ENST00000362347 106 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 RNU1-42P-201ENST00000364033 160 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 MIR513A1-201ENST00000385138 129 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 Y_RNA.587-201ENST00000391210 103 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 RNA5SP496-201ENST00000391240 109 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 AC245517.4-201ENST00000448601 281 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 RNU6-138P-201ENST00000515952 107 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 RNU6-1007P-201ENST00000516586 107 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.5□□□□□ -2.17
CLCNKAP51800 MIR5688-201ENST00000580619 83 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 AC008507.4-201ENST00000585464 127 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 AL645939.4-201ENST00000604495 135 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 MIR8063-201ENST00000621930 81 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 AC106754.2-201ENST00000623006 233 ntBASIC1.5□□□□□ -2.17
CLCNKAP51800 AL161722.3-201ENST00000605789 2983 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 SNORD33-201ENST00000362761 85 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 Y_RNA.297-201ENST00000364950 91 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 snoU2-30.1-201ENST00000365012 70 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 RNU6-1318P-201ENST00000365389 103 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 RNA5SP259-201ENST00000365541 109 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 RNU6-47P-201ENST00000383866 107 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 RNU4-62P-201ENST00000410125 130 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 RPL30P13-201ENST00000418873 348 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.49□□□□□ -2.17
CLCNKAP51800 Y_RNA.714-201ENST00000517065 90 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CLCNKAP51800 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.49□□□□□ -2.17
CLCNKAP51800 AC015688.6-201ENST00000577737 104 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.49□□□□□ -2.17
CLCNKAP51800 MIR3671-201ENST00000580455 88 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 RNU2-4P-201ENST00000606190 192 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 uc_338.4-201ENST00000616635 176 ntBASIC1.49□□□□□ -2.17
CLCNKAP51800 AP000648.3-201ENST00000623539 4507 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms