Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 Z92545.1-201ENST00000411782 234 ntBASIC3.36□□□□□ -1.87
CLK2P49760 RPL39P25-201ENST00000449384 154 ntBASIC3.36□□□□□ -1.87
CLK2P49760 AC107297.1-201ENST00000459991 176 ntBASIC3.36□□□□□ -1.87
CLK2P49760 RN7SL633P-201ENST00000488974 297 ntBASIC3.36□□□□□ -1.87
CLK2P49760 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.36□□□□□ -1.87
CLK2P49760 RN7SKP43-201ENST00000516173 320 ntBASIC3.36□□□□□ -1.87
CLK2P49760 RNU7-6P-201ENST00000516845 62 ntBASIC3.36□□□□□ -1.87
CLK2P49760 RNU7-181P-201ENST00000517234 74 ntBASIC3.36□□□□□ -1.87
CLK2P49760 AC141557.1-201ENST00000540982 400 ntBASIC3.36□□□□□ -1.87
CLK2P49760 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLK2P49760 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLK2P49760 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CLK2P49760 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.35□□□□□ -1.87
CLK2P49760 RNU6-1031P-201ENST00000384773 107 ntBASIC3.35□□□□□ -1.87
CLK2P49760 MIR1283-2-201ENST00000408621 87 ntBASIC3.35□□□□□ -1.87
CLK2P49760 MIR1912-201ENST00000410389 80 ntBASIC3.35□□□□□ -1.87
CLK2P49760 RNU2-7P-201ENST00000410794 178 ntBASIC3.35□□□□□ -1.87
CLK2P49760 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.35□□□□□ -1.87
CLK2P49760 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.35□□□□□ -1.87
CLK2P49760 AC007336.1-201ENST00000576365 3828 ntBASIC3.35□□□□□ -1.87
CLK2P49760 AL033523.1-201ENST00000605153 153 ntBASIC3.35□□□□□ -1.87
CLK2P49760 AC021613.1-201ENST00000623880 111 ntBASIC3.35□□□□□ -1.87
CLK2P49760 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CLK2P49760 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CLK2P49760 MAPK10-266ENST00000641066 6555 ntBASIC3.35□□□□□ -1.87
CLK2P49760 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLK2P49760 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLK2P49760 AC093831.2-201ENST00000624393 3427 ntBASIC3.35□□□□□ -1.87
CLK2P49760 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CLK2P49760 SNORA4.2-201ENST00000365313 147 ntBASIC3.34□□□□□ -1.87
CLK2P49760 MIR520A-201ENST00000384862 85 ntBASIC3.34□□□□□ -1.87
CLK2P49760 EEF1A1P41-201ENST00000414667 207 ntBASIC3.34□□□□□ -1.87
CLK2P49760 HMGN2P3-201ENST00000433603 273 ntBASIC3.34□□□□□ -1.87
CLK2P49760 HMGN2P5-201ENST00000436882 273 ntBASIC3.34□□□□□ -1.87
CLK2P49760 RNU2-11P-201ENST00000459191 187 ntBASIC3.34□□□□□ -1.87
CLK2P49760 RN7SL75P-201ENST00000461926 281 ntBASIC3.34□□□□□ -1.87
CLK2P49760 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.33□□□□□ -1.88
CLK2P49760 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLK2P49760 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLK2P49760 RNU6-1131P-201ENST00000364955 107 ntBASIC3.33□□□□□ -1.88
CLK2P49760 SNORA70.7-201ENST00000384159 133 ntBASIC3.33□□□□□ -1.88
CLK2P49760 RNU6-851P-201ENST00000384565 107 ntBASIC3.33□□□□□ -1.88
CLK2P49760 SNORA19.1-201ENST00000410656 129 ntBASIC3.33□□□□□ -1.88
CLK2P49760 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.33□□□□□ -1.88
CLK2P49760 RPS27P29-201ENST00000463110 252 ntBASIC3.33□□□□□ -1.88
CLK2P49760 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.33□□□□□ -1.88
CLK2P49760 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLK2P49760 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLK2P49760 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLK2P49760 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.32□□□□□ -1.88
CLK2P49760 RNU6-294P-201ENST00000364999 102 ntBASIC3.32□□□□□ -1.88
CLK2P49760 SNORA9.2-201ENST00000365361 133 ntBASIC3.32□□□□□ -1.88
CLK2P49760 Y_RNA.494-201ENST00000384432 111 ntBASIC3.32□□□□□ -1.88
CLK2P49760 MIR518A2-201ENST00000384966 87 ntBASIC3.32□□□□□ -1.88
CLK2P49760 RNU7-34P-201ENST00000459394 64 ntBASIC3.32□□□□□ -1.88
CLK2P49760 UBL5P3-201ENST00000475112 231 ntBASIC3.32□□□□□ -1.88
CLK2P49760 RNU6-56P-201ENST00000516986 93 ntBASIC3.32□□□□□ -1.88
CLK2P49760 EIF4BP1-201ENST00000554881 351 ntBASIC3.32□□□□□ -1.88
CLK2P49760 AL021368.2-201ENST00000606125 5352 ntBASIC3.31□□□□□ -1.88
CLK2P49760 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
CLK2P49760 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLK2P49760 RNU1-109P-201ENST00000383960 147 ntBASIC3.31□□□□□ -1.88
CLK2P49760 MIR516B2-201ENST00000385190 85 ntBASIC3.31□□□□□ -1.88
CLK2P49760 MIR136-201ENST00000385207 82 ntBASIC3.31□□□□□ -1.88
CLK2P49760 RNU6-816P-201ENST00000390914 107 ntBASIC3.31□□□□□ -1.88
CLK2P49760 RNU6-1268P-201ENST00000391214 107 ntBASIC3.31□□□□□ -1.88
CLK2P49760 RNU6-1239P-201ENST00000391310 107 ntBASIC3.31□□□□□ -1.88
CLK2P49760 AL135938.1-201ENST00000443141 297 ntBASIC3.31□□□□□ -1.88
CLK2P49760 RPS23P4-201ENST00000487908 423 ntBASIC3.31□□□□□ -1.88
CLK2P49760 RNU6-109P-201ENST00000516364 107 ntBASIC3.31□□□□□ -1.88
CLK2P49760 RNU6-184P-201ENST00000516514 107 ntBASIC3.31□□□□□ -1.88
CLK2P49760 AC004812.1-201ENST00000540773 146 ntBASIC3.31□□□□□ -1.88
CLK2P49760 MIR2052-201ENST00000636055 55 ntBASIC3.31□□□□□ -1.88
CLK2P49760 SNORA48.1-201ENST00000390879 135 ntBASIC3.3□□□□□ -1.88
CLK2P49760 NDUFB4P4-201ENST00000404822 243 ntBASIC3.3□□□□□ -1.88
CLK2P49760 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.3□□□□□ -1.88
CLK2P49760 RNU6-893P-201ENST00000458841 100 ntBASIC3.3□□□□□ -1.88
CLK2P49760 RNU6-904P-201ENST00000516206 101 ntBASIC3.3□□□□□ -1.88
CLK2P49760 RNVU1-2-201ENST00000516326 135 ntBASIC3.3□□□□□ -1.88
CLK2P49760 RNU6-158P-201ENST00000517104 100 ntBASIC3.3□□□□□ -1.88
CLK2P49760 AC107016.2-201ENST00000547968 190 ntBASIC3.3□□□□□ -1.88
CLK2P49760 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLK2P49760 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLK2P49760 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
CLK2P49760 AC092881.1-201ENST00000638218 2733 ntBASIC3.29□□□□□ -1.88
CLK2P49760 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLK2P49760 Y_RNA.370-201ENST00000365589 108 ntBASIC3.29□□□□□ -1.88
CLK2P49760 Y_RNA.507-201ENST00000384500 99 ntBASIC3.29□□□□□ -1.88
CLK2P49760 Y_RNA.531-201ENST00000384589 121 ntBASIC3.29□□□□□ -1.88
CLK2P49760 Y_RNA.558-201ENST00000384685 113 ntBASIC3.29□□□□□ -1.88
CLK2P49760 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CLK2P49760 RPL23AP63-201ENST00000498752 471 ntBASIC3.29□□□□□ -1.88
CLK2P49760 SNORA31.4-201ENST00000516049 129 ntBASIC3.29□□□□□ -1.88
CLK2P49760 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.29□□□□□ -1.88
CLK2P49760 SCARNA13-201ENST00000516672 275 ntBASIC3.29□□□□□ -1.88
CLK2P49760 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.29□□□□□ -1.88
CLK2P49760 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLK2P49760 RNU6-661P-201ENST00000362409 107 ntBASIC3.28□□□□□ -1.88
CLK2P49760 AL512326.2-201ENST00000426359 151 ntBASIC3.28□□□□□ -1.88
CLK2P49760 RNU7-53P-201ENST00000516705 60 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms