Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC140658.3-201ENST00000567603 271 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 AC007318.2-201ENST00000620999 243 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 MIR1248-201ENST00000629190 106 ntBASIC3.08□□□□□ -1.92
CHRNA4P43681 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
CHRNA4P43681 AC092881.1-201ENST00000638218 2733 ntBASIC3.07□□□□□ -1.92
CHRNA4P43681 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHRNA4P43681 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHRNA4P43681 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CHRNA4P43681 SNORA27-201ENST00000384323 126 ntBASIC3.07□□□□□ -1.92
CHRNA4P43681 MIR519C-201ENST00000385053 87 ntBASIC3.07□□□□□ -1.92
CHRNA4P43681 AC244505.4-201ENST00000434905 287 ntBASIC3.07□□□□□ -1.92
CHRNA4P43681 SSXP5-201ENST00000443473 287 ntBASIC3.07□□□□□ -1.92
CHRNA4P43681 UQCRHP3-201ENST00000451503 251 ntBASIC3.07□□□□□ -1.92
CHRNA4P43681 RNU7-96P-201ENST00000459535 64 ntBASIC3.07□□□□□ -1.92
CHRNA4P43681 RPL23AP94-201ENST00000512518 302 ntBASIC3.07□□□□□ -1.92
CHRNA4P43681 AC008885.1-201ENST00000514930 301 ntBASIC3.07□□□□□ -1.92
CHRNA4P43681 RNU6-86P-201ENST00000606534 107 ntBASIC3.07□□□□□ -1.92
CHRNA4P43681 AC006111.3-201ENST00000622137 383 ntBASIC3.07□□□□□ -1.92
CHRNA4P43681 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CHRNA4P43681 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CHRNA4P43681 RNU6-1084P-201ENST00000362498 107 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 SNORD68-201ENST00000363214 84 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 Y_RNA.171-201ENST00000363760 102 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 RNU6-1163P-201ENST00000364516 107 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.06□□□□□ -1.92
CHRNA4P43681 MIR128-1-201ENST00000384921 82 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.06□□□□□ -1.92
CHRNA4P43681 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.06□□□□□ -1.92
CHRNA4P43681 RPS12P2-201ENST00000439728 269 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 AC069257.2-201ENST00000441819 155 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 AL109933.2-201ENST00000452651 260 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 RNA5SP112-201ENST00000515937 99 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 RNU6-1258P-201ENST00000516911 111 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 MIR548AE2-201ENST00000583456 67 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 MIR6852-201ENST00000621699 66 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 U6.108-201ENST00000637764 58 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 MIR622-201ENST00000638396 96 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 MAPK10-322ENST00000641485 4530 ntBASIC3.06□□□□□ -1.92
CHRNA4P43681 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CHRNA4P43681 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CHRNA4P43681 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
CHRNA4P43681 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CHRNA4P43681 MIR22-201ENST00000362190 85 ntBASIC3.05□□□□□ -1.92
CHRNA4P43681 Y_RNA.140-201ENST00000363474 103 ntBASIC3.05□□□□□ -1.92
CHRNA4P43681 Y_RNA.247-201ENST00000364500 92 ntBASIC3.05□□□□□ -1.92
CHRNA4P43681 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.05□□□□□ -1.92
CHRNA4P43681 AC123900.1-201ENST00000420390 96 ntBASIC3.05□□□□□ -1.92
CHRNA4P43681 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.05□□□□□ -1.92
CHRNA4P43681 AC092185.1-201ENST00000491371 97 ntBASIC3.05□□□□□ -1.92
CHRNA4P43681 SNORD45.4-201ENST00000516629 73 ntBASIC3.05□□□□□ -1.92
CHRNA4P43681 RNU6-586P-201ENST00000517265 104 ntBASIC3.05□□□□□ -1.92
CHRNA4P43681 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.05□□□□□ -1.92
CHRNA4P43681 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CHRNA4P43681 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.05□□□□□ -1.92
CHRNA4P43681 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHRNA4P43681 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.04□□□□□ -1.92
CHRNA4P43681 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CHRNA4P43681 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CHRNA4P43681 Y_RNA.332-201ENST00000365271 113 ntBASIC3.04□□□□□ -1.92
CHRNA4P43681 SNORA80E-201ENST00000384744 137 ntBASIC3.04□□□□□ -1.92
CHRNA4P43681 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CHRNA4P43681 RNA5SP252-201ENST00000391131 119 ntBASIC3.04□□□□□ -1.92
CHRNA4P43681 RNA5SP467-201ENST00000391274 118 ntBASIC3.04□□□□□ -1.92
CHRNA4P43681 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.04□□□□□ -1.92
CHRNA4P43681 AC125388.1-201ENST00000459631 156 ntBASIC3.04□□□□□ -1.92
CHRNA4P43681 RNU6-965P-201ENST00000516721 96 ntBASIC3.04□□□□□ -1.92
CHRNA4P43681 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.04□□□□□ -1.92
CHRNA4P43681 MIR4765-201ENST00000585007 77 ntBASIC3.04□□□□□ -1.92
CHRNA4P43681 MIR8057-201ENST00000620957 69 ntBASIC3.04□□□□□ -1.92
CHRNA4P43681 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.04□□□□□ -1.92
CHRNA4P43681 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHRNA4P43681 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CHRNA4P43681 MIR340-201ENST00000362125 95 ntBASIC3.03□□□□□ -1.92
CHRNA4P43681 RNU6-1244P-201ENST00000363614 108 ntBASIC3.03□□□□□ -1.92
CHRNA4P43681 Y_RNA.470-201ENST00000384307 117 ntBASIC3.03□□□□□ -1.92
CHRNA4P43681 RN7SKP220-201ENST00000410611 288 ntBASIC3.03□□□□□ -1.92
CHRNA4P43681 AL445685.2-201ENST00000422551 342 ntBASIC3.03□□□□□ -1.92
CHRNA4P43681 RPL31P63-201ENST00000422565 375 ntBASIC3.03□□□□□ -1.92
CHRNA4P43681 UBE2DNL-203ENST00000474922 222 ntBASIC3.03□□□□□ -1.92
CHRNA4P43681 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.03□□□□□ -1.92
CHRNA4P43681 ZNF861P-201ENST00000588126 639 ntBASIC3.03□□□□□ -1.92
CHRNA4P43681 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.03□□□□□ -1.92
CHRNA4P43681 SEPT14P17-201ENST00000617978 177 ntBASIC3.03□□□□□ -1.92
CHRNA4P43681 MAPK10-266ENST00000641066 6555 ntBASIC3.03□□□□□ -1.92
CHRNA4P43681 AL365361.1-201ENST00000566942 3481 ntBASIC3.03□□□□□ -1.92
CHRNA4P43681 AC008264.2-201ENST00000610193 3731 ntBASIC3.03□□□□□ -1.93
CHRNA4P43681 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CHRNA4P43681 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CHRNA4P43681 SNORD115-37-201ENST00000363768 82 ntBASIC3.02□□□□□ -1.93
CHRNA4P43681 SNORD38.1-201ENST00000363863 68 ntBASIC3.02□□□□□ -1.93
CHRNA4P43681 Y_RNA.241-201ENST00000364470 117 ntBASIC3.02□□□□□ -1.93
CHRNA4P43681 RNA5SP274-201ENST00000410484 108 ntBASIC3.02□□□□□ -1.93
CHRNA4P43681 AL135938.1-201ENST00000443141 297 ntBASIC3.02□□□□□ -1.93
CHRNA4P43681 RN7SL633P-201ENST00000488974 297 ntBASIC3.02□□□□□ -1.93
CHRNA4P43681 UBL5P1-201ENST00000507979 193 ntBASIC3.02□□□□□ -1.93
CHRNA4P43681 RNA5SP33-201ENST00000516687 98 ntBASIC3.02□□□□□ -1.93
CHRNA4P43681 SNORA31.21-201ENST00000517180 77 ntBASIC3.02□□□□□ -1.93
CHRNA4P43681 AL353149.1-201ENST00000610667 244 ntBASIC3.02□□□□□ -1.93
CHRNA4P43681 AL355596.1-201ENST00000565399 3996 ntBASIC3.02□□□□□ -1.93
CHRNA4P43681 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms